Os05g0593300

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Revision as of 10:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0593300| Description = Conserved hypothetical protein| Version = NM_001063037.1 GI:115465804 GeneID:4339802| Length = 5027 bp| Definition ...")
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Gene Name

Os05g0593300

Description

Conserved hypothetical protein

Version

NM_001063037.1 GI:115465804 GeneID:4339802

Length

5027 bp

Definition

Oryza sativa Japonica Group Os05g0593300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29636372..29641398

Sequence Coding Region

29637094..29638401,29639236..29639342,29639424..29639629,29639720..29639941,29640107..29640207
,29640659..29640700

Expression

GEO Profiles:Os05g0593300

Genome Context

<gbrowseImage1> name=NC_008398:29636372..29641398 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29636372..29641398 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattctactcatgcggcaactgcacgccagacgtagaaagggtaatagccaggaactcaagtcgatcatacagccacatagttctcatgttgccgctctaacacaagcatgcccaaataacttatccggaggcgctttgacgccacttgatctttgcgacgctgtaagttcaaacctagatgcaagtacgcctggtagtggttaccagagttcttatacaattgggttaacaccaccaaaccatcatggttccaatggccctacaactcccaattcaactctgaattccaggttatcagggtcacctggtacggttctgagcaacaattttttgccgccttcaacatttagtgcctcttcaagggatgctcagaaatatggtgttcctagatgtacctctttacaaagtgatgagcaacagaagattcactataaccagattcttagtggtagaaatcttcagcagactggaggttctgttccaggagcatttcctcctggggttgatcgtggtgcacgtgtgatgcctggtacccatggtatgggcatggtgtcaggactaaatcgagccaacagtgggcaaggagcgccaaacgcagtaaatgtccatcctggagccatgtctgcccctggaaatccaaccttacggccacataatcctatgcaggcgcttcatgtttcacagggaaatactcaagccatcagcagcatgaatcattcactctccaatgcggcatcttcttcacctgttcagtcttttcctattcagcaacatcaacagaaacatcaaatttcaccgccatcacacatgtttggaaatccgcagcatcctcagatccaagggatgagccattcgaatccacagcagcaaacatatgctatgcgcttggctaaagaaaggaacatccaacaacgtatggtgcctcagcaacagaatgatcttcctggagcaagtgcagtacccagtgtacagaatggttcgcatggtcagcagcagaagcaatcacctgcagccttgtcagccccatcttcacaaccacagcatcagcggcagcaagctgcacaaaatccaccagatagctgtgcacatcccaatcaaccaaccaatgctacacaacataagccaaagaagagtcaacagcagcctagacagaatcagcaacaaaggaatcaaggtagtcaacaggctaagcttatgaagagcttaggacgagggaacatgctgatacctcagactacagttgacaccactccaaccaatgctgtttctgcgtcttccaaaaagcaaattactgagaacaaactgattcaacatggccaaggaactttacccggaaataaagcatcaaatccgtcaatccctcatcctggaaatcaacataaactatacagttctccattgcctcaatcaccaaaacagttgccagatattggtaaccaaggcgtattgcagggttctcctagtcaggccctcttaacttcacaacagcttccactccatcctaaatcttcactgaccacacaacagcaacaacagcatgtccattcatcgcagaatagcatccaaagaatgatgatgcaccaaaacctccaaagtaattctgattgtaggccagactcacaggtcgttcaagtccaaaacaatcagatagttccaacaccacctattcctcagagtacagagaaaggcagcgctggactttcatccataagccagcagaagcacgaggtgtcgaatgattcaaatgcagttaattcaacatctatgatgcttagctctcctcaagatacatttgctgggggtgagagactattgccatcatctagccatgatgtgctggaaaggcagatgccaggtggtttgcctatgtatggtggccagtggcaccaggagcaatctaagcagcaactgcagtccccaaaccagcagagaccagttgttcaaggcagtgtatatgctccattaaatcctgggcctggctga</cdnaseq>

Protein Sequence

<aaseq>MILLMRQLHARRRKGNSQELKSIIQPHSSHVAALTQACPNNLSG GALTPLDLCDAVSSNLDASTPGSGYQSSYTIGLTPPNHHGSNGPTTPNSTLNSRLSGS PGTVLSNNFLPPSTFSASSRDAQKYGVPRCTSLQSDEQQKIHYNQILSGRNLQQTGGS VPGAFPPGVDRGARVMPGTHGMGMVSGLNRANSGQGAPNAVNVHPGAMSAPGNPTLRP HNPMQALHVSQGNTQAISSMNHSLSNAASSSPVQSFPIQQHQQKHQISPPSHMFGNPQ HPQIQGMSHSNPQQQTYAMRLAKERNIQQRMVPQQQNDLPGASAVPSVQNGSHGQQQK QSPAALSAPSSQPQHQRQQAAQNPPDSCAHPNQPTNATQHKPKKSQQQPRQNQQQRNQ GSQQAKLMKSLGRGNMLIPQTTVDTTPTNAVSASSKKQITENKLIQHGQGTLPGNKAS NPSIPHPGNQHKLYSSPLPQSPKQLPDIGNQGVLQGSPSQALLTSQQLPLHPKSSLTT QQQQQHVHSSQNSIQRMMMHQNLQSNSDCRPDSQVVQVQNNQIVPTPPIPQSTEKGSA GLSSISQQKHEVSNDSNAVNSTSMMLSSPQDTFAGGERLLPSSSHDVLERQMPGGLPM YGGQWHQEQSKQQLQSPNQQRPVVQGSVYAPLNPGPG</aaseq>

Gene Sequence

<dnaseqindica>2998..4305#2057..2163#1770..1975#1458..1679#1192..1292#699..740#ttaatagcattgagcaattcaaggtaatttaaaatctgggatagcaactttttctatgtttgtatattcttcaaacatgtcctgcaagctctgattttatttccgttcttggttctaggcattttattttagtggtagatgccattaggagtaagttttgggttctgttgtaaactctagttgcagtgaaaaaaaatacattttatcataatctcatgggctgctgttagtgatctttccctgattaacttgagttttgcataccttgtcatgcagtctgtatataggcaacctaaagggtgcaaggagcgttataaggttctcgtggataaaaattctggtgatggtgccgatagtgcagaggactctggttcatctcaacactatcattttacgttgccaggcattccaaaggcatgttataactactcttttgatttatatatttaattgcttgccacatatgcgggtacatctcacaaaaatgtgatgttggacctatttactgtctgatactttctttctgaattcaggtgttgctttcatcagcaatattgctataagtgaagacatgttgagcatttcactgagttcctaacatgttttattcatatgaacatcagggaagtgctaggcagttattccaacgacttcaaggaccaatagaggaagaaaatctcaaggcacattttgaaaaaatgattctactcatgcggcaactgcacgccagacgtagaaaggttcatgtctctccttatgattattctggtcgctttaatttgttggtggtttataatgtataatcatgcaacttattttgttacatttataacagaggttaggtaactcttgcttttttttttgtcttgcaagaattttaggttgtaatggtgaaaccaagtattcattttctagtcttgaacttgtattagttctatacctgtgcttgtctatgtacctctttatttcaatttatgcatgtacctatgctatatttgataatatgatgtggtagcaaactcttccgttgaactatctcacttccatctgtctcaatcatctttctgaactagtaatgctgaactgataatgtattattcacattatgccagagtgctttttttactacccttcttgttgttactgggaagtatttcttatggtatgttttttcttgtgtcttgtctatagggtaatagccaggaactcaagtcgatcatacagccacatagttctcatgttgccgctctaacacaagcatgcccaaataacttatccggaggcgctttgacgtatgtaatgcttttgaatgttctttttgatatttagtttaatatttttttggtgaaaatactaagatatttcatcttcctatatgttctctagttattattattattttatggccctaacagcatccagtggtcaccttcatgttgatgtgtaatgtgtaacaggccacttgatctttgcgacgctgtaagttcaaacctagatgcaagtacgcctggtagtggttaccagagttcttatacaattgggttaacaccaccaaaccatcatggttccaatggccctacaactcccaattcaactctgaattccaggttatcagggtcacctggtacggttctgagcaacaattttttgccgccttcaacatttagtgcctcttcaaggtaaattcttaattcttcgtagcaggtattaagaagaacgcatgacaaaattcatttaaaaagttctcgtctgtgcaatttcttctatagggatgctcagaaatatggtgttcctagatgtacctctttacaaagtgatgagcaacagaagattcactataaccagattcttagtggtagaaatcttcagcagactggaggttctgttccaggagcatttcctcctggggttgatcgtggtgcacgtgtgatgcctggtacccatggtatgggcatggtgtcaggactaaatcgaggtatgcctgctgcaactgtaggctttcctaggcatagttcccctggaaagccaaatgtggtttcacctggaaatgtattagccaacagtgggcaaggagcgccaaacgcagtaaatgtccatcctggagccatgtctgcccctggaaatccaaccttacggccacataatcctatgcaggcgcttcatgtgagttaaccttttatttattatctagttaaatcttggtgctcacacagagtcagacttgagttaactgcatgttttaacttttaagctcttctccattggttatcatctctcctataaagaaaagaatgggagatttttactggtgtctttgcttgtctttccagttgcaccctccaagcaatccatgcattatttgttattgcataagtgatgccagcatacttatgtcttatataaacaaattcatgagtactgctcccacttagttgctttctatattttttattgaaccaatgttgccagcaaacttatgtaaatgagaagttgcctttatcgaaggatatcagaggcttgtgtaggatgctatgcagcttctctagtgatttgctgctcgaattttttgctgtgtcacattttctttgttttctatggacggattttatatgcttagatgtcatttgccagttaactgattacgcaaatttcaatgttccttcaggacagttaactgattggacatccacatgtttgttccttgggaaattagaaaaatatgaaatttatttttatctgaccaatctaaatagttctgtgtaactgaagcttaaaaagtttgactcaacacattctaaagcttagttgctttagactcggagggattacatttacatctgttatttatgtgacttgaattttatgaaggttaaagtacctcactgaatttataaactgttaaaaactagggatagctaatttatatttcctttcctttagcctggtcaaaatatggaagagcataggcagattgtgatgccagagttctgcatgcaggtttcacagggaaatactcaagccatcagcagcatgaatcattcactctccaatgcggcatcttcttcacctgttcagtcttttcctattcagcaacatcaacagaaacatcaaatttcaccgccatcacacatgtttggaaatccgcagcatcctcagatccaagggatgagccattcgaatccacagcagcaaacatatgctatgcgcttggctaaagaaaggaacatccaacaacgtatggtgcctcagcaacagaatgatcttcctggagcaagtgcagtacccagtgtacagaatggttcgcatggtcagcagcagaagcaatcacctgcagccttgtcagccccatcttcacaaccacagcatcagcggcagcaagctgcacaaaatccaccagatagctgtgcacatcccaatcaaccaaccaatgctacacaacataagccaaagaagagtcaacagcagcctagacagaatcagcaacaaaggaatcaaggtagtcaacaggctaagcttatgaagagcttaggacgagggaacatgctgatacctcagactacagttgacaccactccaaccaatgctgtttctgcgtcttccaaaaagcaaattactgagaacaaactgattcaacatggccaaggaactttacccggaaataaagcatcaaatccgtcaatccctcatcctggaaatcaacataaactatacagttctccattgcctcaatcaccaaaacagttgccagatattggtaaccaaggcgtattgcagggttctcctagtcaggccctcttaacttcacaacagcttccactccatcctaaatcttcactgaccacacaacagcaacaacagcatgtccattcatcgcagaatagcatccaaagaatgatgatgcaccaaaacctccaaagtaattctgattgtaggccagactcacaggtcgttcaagtccaaaacaatcagatagttccaacaccacctattcctcagagtacagagaaaggcagcgctggactttcatccataagccagcagaagcacgaggtgtcgaatgattcaaatgcagttaattcaacatctatgatgcttagctctcctcaagatacatttgctgggggtgagagactattgccatcatctagccatgatgtgctggaaaggcagatgccaggtggtttgcctatgtatggtggccagtggcaccaggagcaatctaagcagcaactgcagtccccaaaccagcagagaccagttgttcaaggcagtgtatatgctccattaaatcctgggcctggctgatgataaattaatctgggttggtcacttttacagagcaacccttttttgaaatctaaagttattgtacaggtatgcacttttaacttccttactttttgacttggtaacggatactgtctttgaattttgttatgtcaatgcagagattaagtaaacttatggaaccatttgcttttccttctgattattctaggacatcaagttgctcgtattcatcatttcttgaagtagaggtagggtgatagaattgatattcgagtcgagcagtttaaatgatccatgtctaaaagcagatgggcttttgcagtaatttaaagcttgtgctactatattctttgtagggagtatttttctgatatttttttaccttatctcacttgctaggtgtcagtgactccgtaacatggaagctgcggatgatagtgatgttaattcaacttggagctaatcgtaatcaccttagtgtcaggtagatagttgtttccgtgccattttaagtccacctttagaaggtgaaatatgttttatgcagtctagataactggatggaggtggctgttgcagcggcaaacttcgtttctttttggtggattctgacccaaatcctgggcccggctgtatattttcgatgcgaggtccatgctttctagaatcaggaggataaagtgtaaccctgtaattgcttcaactacaacttggtgaatgcaaaagtgcttatttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0593300, RefSeq:Os05g0593300