Os05g0594100

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Revision as of 10:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0594100| Description = Similar to GDA2 protein| Version = NM_001063040.1 GI:115465810 GeneID:4339805| Length = 1306 bp| Definition = Oryza...")
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Gene Name

Os05g0594100

Description

Similar to GDA2 protein

Version

NM_001063040.1 GI:115465810 GeneID:4339805

Length

1306 bp

Definition

Oryza sativa Japonica Group Os05g0594100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29666416..29667721

Sequence Coding Region

29666656..29667489

Expression

GEO Profiles:Os05g0594100

Genome Context

<gbrowseImage1> name=NC_008398:29666416..29667721 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29666416..29667721 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggggtacgacgagcgtgagttctggcagttcagcgaccagctccgcctccacaacttctccagcctctccatcgccgactccatctggtcctccccctcgcctgccgccgtcgatcatagcagcaacaagctcgccctcgccaacaacagcaacaacaacgccaccgccaagacctacttcaacaagtccgtcggcaggccggccaacaacaacttcaacttcaactacaacagcaacagcgtcgtcgtagatgcgttcaacgggaagaagaaggccgctgtcgacgctcctgctggaggaggaggaggaggcaggaacaacaacaagaagaacagcagcagcaacgacaacaagatgagcagcaggttgaagaagagccagctgccggcgtcggagtcggtgccaaaggaggaggcgatcgggggatacatattcgtgtgcaacaacgagacgatggaggagaatctcaagaggcagctgttcggcctgccatccaggtacagggactcggtgagggccatcaggcccggcctcccgctcttcctctacaactactccacccaccagcttcacggcatcttcgaggccaccagcttcggcggatccaacatcgatcccggcgcttgggaggacagcaagtgccccggcggcgagtccaggttcccagcgcaggttcgggtggccacgcgcaagatctgtgagccgctggaggaggacgccttcaggcccgtgctgcaccactacgacggccccaagttccgcctcgagctcaccgtcgccgaggccctatcccttcttgacatcttcgccgagaagctcttcgcctga</cdnaseq>

Protein Sequence

<aaseq>MEGYDEREFWQFSDQLRLHNFSSLSIADSIWSSPSPAAVDHSSN KLALANNSNNNATAKTYFNKSVGRPANNNFNFNYNSNSVVVDAFNGKKKAAVDAPAGG GGGGRNNNKKNSSSNDNKMSSRLKKSQLPASESVPKEEAIGGYIFVCNNETMEENLKR QLFGLPSRYRDSVRAIRPGLPLFLYNYSTHQLHGIFEATSFGGSNIDPGAWEDSKCPG GESRFPAQVRVATRKICEPLEEDAFRPVLHHYDGPKFRLELTVAEALSLLDIFAEKLF A</aaseq>

Gene Sequence

<dnaseqindica>233..1066#agctgcaaagcaagtgttcactttgattccatctccccatccaacccaagcatatctaggaagtgccatccacccgcgtgcaccgccaaattaactccctcctctccaccttaatttcctctctctttctgttaattgagtaaattggtgttgctgcttcttcctcctccgatcaatcgatcatctcccatcggcggtggcagcagacccgatctttctgttaattcagaagatggaggggtacgacgagcgtgagttctggcagttcagcgaccagctccgcctccacaacttctccagcctctccatcgccgactccatctggtcctccccctcgcctgccgccgtcgatcatagcagcaacaagctcgccctcgccaacaacagcaacaacaacgccaccgccaagacctacttcaacaagtccgtcggcaggccggccaacaacaacttcaacttcaactacaacagcaacagcgtcgtcgtagatgcgttcaacgggaagaagaaggccgctgtcgacgctcctgctggaggaggaggaggaggcaggaacaacaacaagaagaacagcagcagcaacgacaacaagatgagcagcaggttgaagaagagccagctgccggcgtcggagtcggtgccaaaggaggaggcgatcgggggatacatattcgtgtgcaacaacgagacgatggaggagaatctcaagaggcagctgttcggcctgccatccaggtacagggactcggtgagggccatcaggcccggcctcccgctcttcctctacaactactccacccaccagcttcacggcatcttcgaggccaccagcttcggcggatccaacatcgatcccggcgcttgggaggacagcaagtgccccggcggcgagtccaggttcccagcgcaggttcgggtggccacgcgcaagatctgtgagccgctggaggaggacgccttcaggcccgtgctgcaccactacgacggccccaagttccgcctcgagctcaccgtcgccgaggccctatcccttcttgacatcttcgccgagaagctcttcgcctgaccatccatcctacctcttccatctcaattatactactgtaacacaccatccatccatcgcccttgttaaatttatagtactagtaactggagtactacttacaacttacttactgctatatggagtagctaatagaggacggaacagaagcttattgctgtttcttacgcatagtacgctcctatggctgtaagaacaagttacataatataggcgaggaaaaataatatggcttttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0594100, RefSeq:Os05g0594100