Os05g0595000

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Revision as of 10:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0595000| Description = Allergen V5/Tpx-1 related family protein| Version = NM_001063046.1 GI:115465822 GeneID:4339811| Length = 745 bp| De...")
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Gene Name

Os05g0595000

Description

Allergen V5/Tpx-1 related family protein

Version

NM_001063046.1 GI:115465822 GeneID:4339811

Length

745 bp

Definition

Oryza sativa Japonica Group Os05g0595000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29706616..29707360

Sequence Coding Region

29706721..29707317

Expression

GEO Profiles:Os05g0595000

Genome Context

<gbrowseImage1> name=NC_008398:29706616..29707360 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29706616..29707360 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccgcgatgatcctcccattactattgctattgtgttggtttctgctgctgtctgtgggcgacgcgatgtgttggttcaacgacgacgcatcagcatcggcaccagcggggtggttggtgtcgtggaccaatgggatgggttggtacaaggggatgccgcgggagttcgtggacggccacaaccagctgcgcgcgcgctacgggctgcagccgatgaggtgggataacaagctggcgaggcaggcgcggcggtggtccgacgccatgcgcggcgactgccagatccgccactccaccggcaacagcttcgccgagagcctctacatcgggaggaacggctggaacgccagggcttccgacgccgtccgatgctggggcgacgaggagcacctctacgacagggacaccggcaaatgcaccgccggcgtcgacttccacgagtgcggccacttcgccttcatggtcaggcccaacttcaccaggatcggctgcgcccgcgccgagtgcttcaacggcggcgtcttcatcacctgcaactacttcaaagacgagcagcaccagccggctacccctcccacctactcctaa</cdnaseq>

Protein Sequence

<aaseq>MAAAAMILPLLLLLCWFLLLSVGDAMCWFNDDASASAPAGWLVS WTNGMGWYKGMPREFVDGHNQLRARYGLQPMRWDNKLARQARRWSDAMRGDCQIRHST GNSFAESLYIGRNGWNARASDAVRCWGDEEHLYDRDTGKCTAGVDFHECGHFAFMVRP NFTRIGCARAECFNGGVFITCNYFKDEQHQPATPPTYS</aaseq>

Gene Sequence

<dnaseqindica>44..640#ggatcggcgggcggcctcgtcctcgtcgggacgacggcagacaatggccgccgccgcgatgatcctcccattactattgctattgtgttggtttctgctgctgtctgtgggcgacgcgatgtgttggttcaacgacgacgcatcagcatcggcaccagcggggtggttggtgtcgtggaccaatgggatgggttggtacaaggggatgccgcgggagttcgtggacggccacaaccagctgcgcgcgcgctacgggctgcagccgatgaggtgggataacaagctggcgaggcaggcgcggcggtggtccgacgccatgcgcggcgactgccagatccgccactccaccggcaacagcttcgccgagagcctctacatcgggaggaacggctggaacgccagggcttccgacgccgtccgatgctggggcgacgaggagcacctctacgacagggacaccggcaaatgcaccgccggcgtcgacttccacgagtgcggccacttcgccttcatggtcaggcccaacttcaccaggatcggctgcgcccgcgccgagtgcttcaacggcggcgtcttcatcacctgcaactacttcaaagacgagcagcaccagccggctacccctcccacctactcctaatatgctcttcttctcttcaacaactgacctgcctgccttcctcattcatgtacattgatacagctgcacaaacaatacaatacaatggaaaccaaatcttcactc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0595000, RefSeq:Os05g0595000