Os05g0595950

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Revision as of 10:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0595950| Description = Protein kinase-like domain containing protein| Version = NM_001187623.1 GI:297724376 GeneID:9266544| Length = 4013 b...")
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Gene Name

Os05g0595950

Description

Protein kinase-like domain containing protein

Version

NM_001187623.1 GI:297724376 GeneID:9266544

Length

4013 bp

Definition

Oryza sativa Japonica Group Os05g0595950, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29759349..29763361

Sequence Coding Region

29759349..29759776,29760691..29763361

Expression

GEO Profiles:Os05g0595950

Genome Context

<gbrowseImage1> name=NC_008398:29759349..29763361 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29759349..29763361 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctctgcggcctcagcttgtgcctccgctgctctcccaccgccgccgccttgtcatacctctgcttgtcttgctcctcgccgccgccgccagcgacgagcagctgctaagcctgcgtgggcaggctgctgtccttgtgtccatcaaagacgccttctccccgcctctcccgacgccattgcgcactacctggagcatcgccaacgacgcctctctctgctcctcgtggcatgccgtccgctgcgcccccgacaaccgcaccgtcgtctccctcgacctctccgcccacaacctctccggcgagctctcctctgccatcgcccacctccagggcctccgcttcctctccctcgccgccaactccctggccggcgacctaccgcccaccatcgccgccctccggcacctgcgctacctcaacctctccaacaaccagttcaacggcaccctccactactacttgtccaccatgaacagcctcgaggtcctggacgtctacgacaacgacctctccggcccgctcccgctcccggacaccaacagcaacctccgccacctcgacctcggtggcaacttcttctccggcagcatcccgaccagcttcggccgcctgcaggccatccagttcctctcggtcgccggcaacagtctcagcggccgcatcccgccggagctcggcaacctcaccgccctgcgccagctctacctgggctactacaaccagttcgacggcggcatccccgcgtcgctgggccgcctcgccagcctggtgcacctggacctggccagctgcggactgcagggggagataccgccgtcgctgggaggcctcgccaacctcgacacgctctacctgcagaccaaccagctgaacggcaccatcccgcccgcgctcgccaacctcaccgctctcaggttcctcgacgtctccaacaacgcgctcaccggcgagatcccgcccgagctcgccgcgctcacccacctccgcctcctcaacatgttcatcaaccgcttccgtggcggcatcccggagttcatcgccgacctccgctcgctccaggtcctcaagctctggcagaacaacttcaccggctccatccccggggctctcggccgcgtcgcgccgctccgtgagctggacctgtccaccaacaggctcaccggcgaggtgccgcgctggctgtgcgcgctccgcaaactcgacatcctcatcctcctcgacaacttcctcttcggcccggtgccggaggggctcggcgcgtgccggacgctcacgcgggtgcgcctggcccggaactacctcaccggcccgctcccgcgcggcttcctctacctgccggcgctcaccacgctggagctgcagggcaactacctgacggggcagctccataatgaggatgaggacgctggcagcccgctgtctttgctcaatctctccggcaacaggctcaacggctccctcccggcctccatcggcaacttctcctccctgcagacgctcctgctcagcggcaaccacttcaccggcgagatcccgcctgaggttggccagctgaggcggctgctgaagctggacctgagcggcaacaacctgagcggcgaggtccctggcgaggtcggcgagtgcgcgtcgctgacgtacctagacctgagcgcgaaccagctgtggggcgccatgccagcgcgggtggtgcagatcaggatgctcaactacctcaacgtgtcgtggaacaagctcaacggcagcatccccgcggagatgggcagcatgaagagcctcaccgacgccgatctctcccacaacgacttctccggccacgtgccccacaacgggcagttcgcctacttcaacgcgtcgtccttcgcgggcaacccgcggctggtgctgtgcggcacgcccgcccccggccccgcccccgggacgacgacgcctggcagcgggggggacgggcgggcgccggtgatgtggctggcggcggcgctggggctgctggcttgctcggtggcgttcgcggcggcggcggtggcgacgacgcgatcggcgattgagcggaggcggcggtcggggtggcagatgagggcgttccagaaggtgcggttcggatgcgaggacgtgatgcggtgcgtgaaggagaacagcgtggtggggcgtggcggggctggggtggtgtacgccggggagatgcccggcggggagtgggtggcggtgaagcggatcgtcgacggtgggttctcggcggaggtgcagacgctggggaggatccggcaccgccacatcgtgcggctgctggccatgtgctggagcgcggaggcgaagctgctggtgtacgagtacatggccggggggagcctgggcgacgcgctgcacggccaccaccggcaccacgacgagtacgacgacgatggcagcaatactaatattattgggtcgttgttgttgccgtgggcggcgcgtcttcgtgtggcgacggaggccgccaaggggctgtgctacctgcaccacgactgctcccctcccatcctccaccgcgacgtcaagtccaacaacatccttctcgacgcccgcctggaggcgcacgtcgccgacttcggcctcgccaagtacctgcgcgccggcgcctccgagtgcatgtccgccatcgccggctcctacggctacatcgcgccagagtatgcatacacgctgaaggtggacgaaaagagcgacgtttacagctttggggtggtgctgctggagctgataacggggcaaaaaccggtgggagagcacctgcagctgcatcaagaggaggaggaggaagcaaatacgacgacgacggtggtggacctggtgcagtgggtgcgggcacgctgcggcagcggcaaggacggagtgtggcgcgtcctcgatcggcggctgggcggcgacgtgccggcagcggaggccacgcacatgttcttcgtggcgatgctgtgcgtgcaggagcacagcgtcgagcgccccaccatgcgcgaggtcgtgcagatgctcgagcaggcaaagcagcagctcagccgctgccaccctcctcctcctcctccaacatccacgtcgatcgaccatgcatgcatgatataa</cdnaseq>

Protein Sequence

<aaseq>MALRPQLVPPLLSHRRRLVIPLLVLLLAAAASDEQLLSLRGQAA VLVSIKDAFSPPLPTPLRTTWSIANDASLCSSWHAVRCAPDNRTVVSLDLSAHNLSGE LSSAIAHLQGLRFLSLAANSLAGDLPPTIAALRHLRYLNLSNNQFNGTLHYYLSTMNS LEVLDVYDNDLSGPLPLPDTNSNLRHLDLGGNFFSGSIPTSFGRLQAIQFLSVAGNSL SGRIPPELGNLTALRQLYLGYYNQFDGGIPASLGRLASLVHLDLASCGLQGEIPPSLG GLANLDTLYLQTNQLNGTIPPALANLTALRFLDVSNNALTGEIPPELAALTHLRLLNM FINRFRGGIPEFIADLRSLQVLKLWQNNFTGSIPGALGRVAPLRELDLSTNRLTGEVP RWLCALRKLDILILLDNFLFGPVPEGLGACRTLTRVRLARNYLTGPLPRGFLYLPALT TLELQGNYLTGQLHNEDEDAGSPLSLLNLSGNRLNGSLPASIGNFSSLQTLLLSGNHF TGEIPPEVGQLRRLLKLDLSGNNLSGEVPGEVGECASLTYLDLSANQLWGAMPARVVQ IRMLNYLNVSWNKLNGSIPAEMGSMKSLTDADLSHNDFSGHVPHNGQFAYFNASSFAG NPRLVLCGTPAPGPAPGTTTPGSGGDGRAPVMWLAAALGLLACSVAFAAAAVATTRSA IERRRRSGWQMRAFQKVRFGCEDVMRCVKENSVVGRGGAGVVYAGEMPGGEWVAVKRI VDGGFSAEVQTLGRIRHRHIVRLLAMCWSAEAKLLVYEYMAGGSLGDALHGHHRHHDE YDDDGSNTNIIGSLLLPWAARLRVATEAAKGLCYLHHDCSPPILHRDVKSNNILLDAR LEAHVADFGLAKYLRAGASECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLEL ITGQKPVGEHLQLHQEEEEEANTTTTVVDLVQWVRARCGSGKDGVWRVLDRRLGGDVP AAEATHMFFVAMLCVQEHSVERPTMREVVQMLEQAKQQLSRCHPPPPPPTSTSIDHAC MI</aaseq>

Gene Sequence

<dnaseqindica>3586..4013#1..2671#atggctctgcggcctcagcttgtgcctccgctgctctcccaccgccgccgccttgtcatacctctgcttgtcttgctcctcgccgccgccgccagcgacgagcagctgctaagcctgcgtgggcaggctgctgtccttgtgtccatcaaagacgccttctccccgcctctcccgacgccattgcgcactacctggagcatcgccaacgacgcctctctctgctcctcgtggcatgccgtccgctgcgcccccgacaaccgcaccgtcgtctccctcgacctctccgcccacaacctctccggcgagctctcctctgccatcgcccacctccagggcctccgcttcctctccctcgccgccaactccctggccggcgacctaccgcccaccatcgccgccctccggcacctgcgctacctcaacctctccaacaaccagttcaacggcaccctccactactacttgtccaccatgaacagcctcgaggtcctggacgtctacgacaacgacctctccggcccgctcccgctcccggacaccaacagcaacctccgccacctcgacctcggtggcaacttcttctccggcagcatcccgaccagcttcggccgcctgcaggccatccagttcctctcggtcgccggcaacagtctcagcggccgcatcccgccggagctcggcaacctcaccgccctgcgccagctctacctgggctactacaaccagttcgacggcggcatccccgcgtcgctgggccgcctcgccagcctggtgcacctggacctggccagctgcggactgcagggggagataccgccgtcgctgggaggcctcgccaacctcgacacgctctacctgcagaccaaccagctgaacggcaccatcccgcccgcgctcgccaacctcaccgctctcaggttcctcgacgtctccaacaacgcgctcaccggcgagatcccgcccgagctcgccgcgctcacccacctccgcctcctcaacatgttcatcaaccgcttccgtggcggcatcccggagttcatcgccgacctccgctcgctccaggtcctcaagctctggcagaacaacttcaccggctccatccccggggctctcggccgcgtcgcgccgctccgtgagctggacctgtccaccaacaggctcaccggcgaggtgccgcgctggctgtgcgcgctccgcaaactcgacatcctcatcctcctcgacaacttcctcttcggcccggtgccggaggggctcggcgcgtgccggacgctcacgcgggtgcgcctggcccggaactacctcaccggcccgctcccgcgcggcttcctctacctgccggcgctcaccacgctggagctgcagggcaactacctgacggggcagctccataatgaggatgaggacgctggcagcccgctgtctttgctcaatctctccggcaacaggctcaacggctccctcccggcctccatcggcaacttctcctccctgcagacgctcctgctcagcggcaaccacttcaccggcgagatcccgcctgaggttggccagctgaggcggctgctgaagctggacctgagcggcaacaacctgagcggcgaggtccctggcgaggtcggcgagtgcgcgtcgctgacgtacctagacctgagcgcgaaccagctgtggggcgccatgccagcgcgggtggtgcagatcaggatgctcaactacctcaacgtgtcgtggaacaagctcaacggcagcatccccgcggagatgggcagcatgaagagcctcaccgacgccgatctctcccacaacgacttctccggccacgtgccccacaacgggcagttcgcctacttcaacgcgtcgtccttcgcgggcaacccgcggctggtgctgtgcggcacgcccgcccccggccccgcccccgggacgacgacgcctggcagcgggggggacgggcgggcgccggtgatgtggctggcggcggcgctggggctgctggcttgctcggtggcgttcgcggcggcggcggtggcgacgacgcgatcggcgattgagcggaggcggcggtcggggtggcagatgagggcgttccagaaggtgcggttcggatgcgaggacgtgatgcggtgcgtgaaggagaacagcgtggtggggcgtggcggggctggggtggtgtacgccggggagatgcccggcggggagtgggtggcggtgaagcggatcgtcgacggtgggttctcggcggaggtgcagacgctggggaggatccggcaccgccacatcgtgcggctgctggccatgtgctggagcgcggaggcgaagctgctggtgtacgagtacatggccggggggagcctgggcgacgcgctgcacggccaccaccggcaccacgacgagtacgacgacgatggcagcaatactaatattattgggtcgttgttgttgccgtgggcggcgcgtcttcgtgtggcgacggaggccgccaaggggctgtgctacctgcaccacgactgctcccctcccatcctccaccgcgacgtcaagtccaacaacatccttctcgacgcccgcctggaggcgcacgtcgccgacttcggcctcgccaagtacctgcgcgccggcgcctccgagtgcatgtccgccatcgccggctcctacggctacatcgcgccaggtataagcttactactcctactaggcagctttcaatctttgaccgactaaaattaagggtatgtttggtagaactttaactcctaaattttgctataaaagttaggtctggtgtggagttgactaaatccagctccacctctctagtttattttataagagagctctatcaaactctgtttctatttttggtagagctgaaactatttggctgggctccagttctaaaagagatggaaagctgaagctgtgacaaacagtcccttactccactactctagactccagctactagctagacggaccaatcatgcatccatccagcattccatattggacggacgttggtggtgtagtgtactagtcgtcgtacgtggtgctaatctcctctcctactacagttattattattattagggtgtgcgcattcttttctttccatgcaagcatgtactccgtactgtgtgtcaccacaccacatttggcctgcactgcatctgcatgccattgccagccaaaggaaaccaagcagcagccctctgctgcgtctgatgatgactagactcctcaaaggacgagcctttctttctttttcttttctttgctgcatagtagtacggatgcatgcatggatcgactgaatctttcgctttcgcttttacttttactgctagtacatgtcttgcggttgatgatttgcctcaatgagtcgtcctcctatcctacctagacaagcgatgcgatgcggcggcagcagaacaacaaagccttgtttgcttttaaacagagtctaaaaagaatgaacaaagtctcttttcatttggtctttcttcttcacaaagcatatgctcctcttttagttagttttttttaaatttctgctgattaattgagtatataaatgtgcttttgcagagtatgcatacacgctgaaggtggacgaaaagagcgacgtttacagctttggggtggtgctgctggagctgataacggggcaaaaaccggtgggagagcacctgcagctgcatcaagaggaggaggaggaagcaaatacgacgacgacggtggtggacctggtgcagtgggtgcgggcacgctgcggcagcggcaaggacggagtgtggcgcgtcctcgatcggcggctgggcggcgacgtgccggcagcggaggccacgcacatgttcttcgtggcgatgctgtgcgtgcaggagcacagcgtcgagcgccccaccatgcgcgaggtcgtgcagatgctcgagcaggcaaagcagcagctcagccgctgccaccctcctcctcctcctccaacatccacgtcgatcgaccatgcatgcatgatataa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0595950, RefSeq:Os05g0595950