Os05g0596700

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Revision as of 10:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0596700| Description = Conserved hypothetical protein| Version = NM_001187624.1 GI:297724378 GeneID:9271205| Length = 4947 bp| Definition ...")
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Gene Name

Os05g0596700

Description

Conserved hypothetical protein

Version

NM_001187624.1 GI:297724378 GeneID:9271205

Length

4947 bp

Definition

Oryza sativa Japonica Group Os05g0596700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29822545..29827491

Sequence Coding Region

29825499..29825587,29825662..29825752

Expression

GEO Profiles:Os05g0596700

Genome Context

<gbrowseImage1> name=NC_008398:29822545..29827491 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29822545..29827491 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactcttggtgataagtcttttttggcctattgcaggttgggccacttgctgcctattataaactaccacttaatcgtgtccttgtggcatttgatggcacggacctgccctgtggaattcttcgtttacaacctaaaggaggattcgggcgccataatgggtctgttgattttgtaa</cdnaseq>

Protein Sequence

<aaseq>MTLGDKSFLAYCRLGHLLPIINYHLIVSLWHLMARTCPVEFFVY NLKEDSGAIMGLLIL</aaseq>

Gene Sequence

<dnaseqindica>2955..3043#3118..3208#actattctccatcgctcgcagcctcccgcatcccacctcgttcgccttccccggcgccggcgcctccaccaccagcgggcacctgtgtggatctgccgtcgtcctatatatagctaggtgaggtccagccgcctcttctcctgcttccttcgttacgctgccctgcccggggatcccactccgcctccgcccttcattccagccacacgtgatttcttctccctccaactctactctcccctttttattatcttctcctctcatggagtggatttttgctcattcagctagtgctgccgtttcttcatttctcctcaaataatcgtgctccctccactagtgcataagtttcacttcacacaatttgcatccaagttctaaagtcatacccaacacatccttaacttttattttcactttcggtcaacaatattatagttactacggagtacgtgctacggtgatcctgatgtgagatcaagctacttttgttaggtatgtcattgattaattaaacaacttaatttttctgagctatttcattttttagaaactcacctcatcttcaaaagaggaagcaggcttgagtgaagacttccatgccctgtttggaatttatactagtgcataataaatcaactgttctctatatgttgttagggtagaaaggtgttgtgcacatttagatattcctttgtacatatcatctaacaatcaagctgtcaatgcctacaaattggagactcaaagaaatttattgctgaaacatcattgcccttaaaatcaataaatgagcgagtcttatcatattttttattactatatgtactattgtttttgttgtgtatctggaagaataatctggttttctgctgcagactgctgcatctgtttttggatctgtggatgtttgtaattagccatgcgaggaaagccgtggacaagacttgcccctttcatatccaagcgtcatatttcaacctctcagacctcattatcttcatcctgctcatcatgatccgcgatacagccatggctctttgttggtcttggtaaccctggtgagaagtatcattgcaccagacacaatgtaagctttgcatctcattcttgtcttggtcatttaattgtttcaatgatttattttcagatcctgtgacaccccatttcgctgcaggctgggtttgatatgatagacatgtttgcacagtctcagggtatatctccgaccaggcatcacttcaaggcactatttgcggaaggtttggctccatatatgtgatcccagagagaatgtattttgatcttttgagttatgtaaactctgttttcctggttcgaagggctgaattggaaccgttgtctttccattgatgcaggaatggtcgaaggtgtgcctgttttgctcgctaagcctcaaacgtatatgaatctcagtggtgaatctgcaagcatcacttttagaactctttccatgttttaatatctgatttctactctgccctactatcttggaataaatctatttcgtgtcccttaactcttggcatggtttaacttttgtccctgaattctaaaactaaatcactctggctcgtggtttattgccactactaatcttcgaacagttgcatgcccctgtcctggtcattgaccgatggttcatgctttccatcatgagcatatcttgtcatattctgttgtgccttttttttttctgtcagcctcgggattgagtttgccagtttcatgagaagctagtattggcactgaaatatgttccatcaagagtaaattgcgcctacagtacatagaacttataaattgctcgctctgatactacaacttgcttagtccgtgtgaactaagactaaatggcccatacaagttatactaaggtactactaagcaagtagtaccaaacgagcgatttgcaagttgctatacttatttgcatccaccacctaagtttgtgtattgtgagtgtaatttactcttccatcaaactcaacaaaagactaacaaactctgctgccaccagttcactggttcacctcattcacgtcctacatgtattcgacattcttcacctaaatcccctcattcactccggggaatgcagtggcggagcttaggctaaattctagaggggaacaacacttaccagagttacataagaaagaggggggcattttgtaatttaatcacttgctatgggtaaatatgtgcttcatgcctacatttattttaaatcttgcaaagctgggggaggcaaagacccaggttggtctctatgatcctctgcaactgccagaatggtttgaggtcaaactgtgattgcctcagcagaaacactgatgttgtcgtcattggtggtgggtctcttgagtaccaccaatttaggatgatacattaaactttttgaggattaggcttatttactagtggaagtggtgctattactcatcagagtttcctggccacaagcctggagaatgaatatgtggctgcaatgggtaggttatgggtgaccaaaaaggttcagtccaattgagctaatttaagtcgatataactgcagggcaatcctggcacttcttattatcttgattttgagataatttagaatatataccatatttggatgctatggaatgtcaaagaatggagtacatcaatgtttttgatgttactaactgaatcagaacgatttgctaagagccatttccccctaaattcaattatgtccgcagctttactttggttggggcaaccaaaagcctatcaacaatcagaattttagttgctatgacttgaacttgatatctcaatatgtctgttttgttttggttacttctatgtcttatttctttgataggtcgtgtgtaattcagcttgtagaaattcctttaactggacataaaaaaatggttataccatactgaccctgatctgatgactcttggtgataagtcttttttggcctattgcaggttgggccacttgctgcctattataaactaccacttaatcgtgtccttgtggtaagtattgtaatatctaatctttatgagtgctaagttacatagcaatctgacttttctggtgtgaatttcaggcatttgatggcacggacctgccctgtggaattcttcgtttacaacctaaaggaggattcgggcgccataatgggtctgttgattttgtaaccatgtgttttaatgaagtaatttgtcattcaaaaggtgacctgataagcaagatgctgacttcattaagaagagacagcatattcttcctttccaatttgtttacttaattacatttttttatttgtagtggtaatttcttcatgcacctttccattttccccacatgttcttttttgctccctttagatagcctgaggcaacgttctgttgaaaagtttaccagacataagcacactcttatctgagtgtggggtagcatgctcccttgttttatacatgtttagtttaccattagctatgtgaaactattttacgtctgcaactaagtgttttaatttttaaattgacacaaaatatttacctttctagcttatcagggcgaagagaatgatataccattttcataagaaccgagaatttagtcaatattaaggattggtaggtttgacatctgtggcattcagttttttttccttaatgtgatattcatacttttattcaggaattggatgtccacctggccaaatggaccccaaagcttttgtgctccagaagtttaataagaccagtctagaacgggtaaatatctactccctctattccaaaaaaaactcaacctcgtactacgacgtgacacatcctagtacaacgaatctgtacatactctatgtccagattcgttgtattaggatgtgtcacattctagtactaggttgcctttttttcttggggatggaagggagtaggcatacttgtagtttcgtgtcattcctttttttttctgagttgaggttttttgaagtaatcattgtattattacttccataattctcactcgatgaacatgctcatttgctgggatagattcatatgaccaacagtctaaaaccctggttatatcctgcatgtaagccgcacctagatttattctacttcatttaaaatcttagtaatttctgcggtgctatacgcaaatgagagatgagttataggcttgcaacatgtgtatgattagaagattggcttaaccttgtggtcaacttccatatggtgtactaatccaattccgtgaagctcacagccgttgagatctctttaatcttaattgttttagataaatgccacgatgccctagaaatcgaactgctggagtgaagttacttggaggacttattatggcattatctgtgacactcttggcgaatttttgtcattgaatcactctagtgataccatatttccggaaacaccgtatttgacttaattatttcagtgttacaaatttcattattattctagatgtaaagaccctgaaggtgtgttgtgacgggcagagtctaatgcttgcatgttttgttttaacctagattgattcagccatagaagagggtgttgagattctaaagttggttgttaccaagggtttatgagtctgcaagatcatcaaattggatcagaaggataagcatctagcaaccatctgacaacacatgacatgcaactgtaaagatgacgatagacgctgcttatctgagaaagcgatctaagcctgttgaatttccctcaaaaatgcctgatgggagaacctgataacatctacacctcatgattcattgatttgtcacacttgctacaatggccgtctcctttgcattggatttgtaagtgttgatgctgccaatgtttctttttatacttttgtactactgacttaataaaaacttgaaggttctatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0596700, RefSeq:Os05g0596700