Os05g0597400

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Revision as of 10:37, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0597400| Description = Conserved hypothetical protein| Version = NM_001187626.1 GI:297724382 GeneID:9271168| Length = 3861 bp| Definition ...")
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Gene Name

Os05g0597400

Description

Conserved hypothetical protein

Version

NM_001187626.1 GI:297724382 GeneID:9271168

Length

3861 bp

Definition

Oryza sativa Japonica Group Os05g0597400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:29844759..29848619

Sequence Coding Region

29844759..29844805,29844893..29845034,29845112..29846434,29846547..29846620,29847755..29847869
,29848587..29848619

Expression

GEO Profiles:Os05g0597400

Genome Context

<gbrowseImage1> name=NC_008398:29844759..29848619 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:29844759..29848619 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccttgccagatatctatccattgacagggttgcaaatcggggacatgcaatcttacgtgtcacgggcgttcctgtattttgcacctctcagcaagaaggtgttcattctggtggataaccagccatggcggtcgagcaagcaatctcgatcggcaagactctggcagttcatggtgaccaagtacaggatgtctccattcgcaaactcgagggcgctcccttgctccggccggaacacctcgagcgccaccgccgccgccgcagcagcagccgacggcgagtgcagcatggcggcgcggcggtggttcgaggtggtggacctgaggctggcgctgcatgggttcctagtgttcgaggtgtcgtggagagacgtgcacggcatcaactacctgaacgagctgctgacggacacgtcgttggcgctggaggcgaggtacatgaagaaatgggagttctacagcgcggagcaggcggccggctgcaccaagctctggttccttggccgcgcccccgaggctgaggcgctgcgcggctacctcaccaccctctactccctgtcccaagacaacgtcgttgataacgacgacaaggacaacaataatattaatactagtactagtaatatgcggcggctgattcatcaacagatccgacgttcgtcgtcgtcggagtcggacaagaagaaggaggacgccgatgatgaggatgatcaggcgccttcttcgtcttcttcctacaccgacacgctgatcctgctccggtccagggacagcgcgctgccgatgaagctgaggcagatcatcatgtcggacatccggctgctgacgctgctggagtctggcctgccgtcgtgggtcatcttcctgcagtcgtacccgctgctgtgcctgctatacaggccgtggatgaggcccctggcgcggacgctctacctgctggtctccctggccaccgtcatcatcggcttctacgacctgtacaagaacgtgccgctgctcaaggccgcggcggcgcgcgtgtgtgggccgctcttcggctggatcgagacgtgggacatggtcacccggatccagtacctgggcaccatcctcttcctccggaaccacctgcgcaagtgcctgcaggggatggtggccctgctgcgcatggccagggcggtgctccgtccgctgtcggctccgctgtcggccatcgcggggcccctcctggccgcctgcggcgaggtatgcgagctgctgggcgacctggcggaggcgctgtgggcgcccttggacgccgtcctggactgcctcaacccgctggtccaggcgctgctccttccgctgcgtttcgcggcctctcttgcttcctgcgcgggctcgctgctctccaacacctacaacttcggcaaggacatctgggagacggtgagcagcatgttcgagctcaaccacatggccgaggcgcagcacagcgccttcgacgtctccttgctcaagtctctctggaacgatctcttctcccagatcttccgggcaatcaggagcatactgaatggtatactgctcttctttgcatcttgcaacaggcataggctcagcatctacaaccatgtgcaggcaaggctgcggcatatgctccacgtttctaggttggcgccctattcatgtccatgcaagaccaagcgccgtctggagggacacgataaagacgaggacgatgttgtcgaatgcgatatctgcaaatga</cdnaseq>

Protein Sequence

<aaseq>MEALPDIYPLTGLQIGDMQSYVSRAFLYFAPLSKKVFILVDNQP WRSSKQSRSARLWQFMVTKYRMSPFANSRALPCSGRNTSSATAAAAAAADGECSMAAR RWFEVVDLRLALHGFLVFEVSWRDVHGINYLNELLTDTSLALEARYMKKWEFYSAEQA AGCTKLWFLGRAPEAEALRGYLTTLYSLSQDNVVDNDDKDNNNINTSTSNMRRLIHQQ IRRSSSSESDKKKEDADDEDDQAPSSSSSYTDTLILLRSRDSALPMKLRQIIMSDIRL LTLLESGLPSWVIFLQSYPLLCLLYRPWMRPLARTLYLLVSLATVIIGFYDLYKNVPL LKAAAARVCGPLFGWIETWDMVTRIQYLGTILFLRNHLRKCLQGMVALLRMARAVLRP LSAPLSAIAGPLLAACGEVCELLGDLAEALWAPLDAVLDCLNPLVQALLLPLRFAASL ASCAGSLLSNTYNFGKDIWETVSSMFELNHMAEAQHSAFDVSLLKSLWNDLFSQIFRA IRSILNGILLFFASCNRHRLSIYNHVQARLRHMLHVSRLAPYSCPCKTKRRLEGHDKD EDDVVECDICK</aaseq>

Gene Sequence

<dnaseqindica>1..47#135..276#354..1676#1789..1862#2997..3111#3829..3861#atggaggccttgccagatatctatccattgacagggttgcaaatcgggtaactaattaagtagatatattaatcgatcgacatgaatgccatgatgatgatgatttacatcgattataattatgttgtctgcagggacatgcaatcttacgtgtcacgggcgttcctgtattttgcacctctcagcaagaaggtgttcattctggtggataaccagccatggcggtcgagcaagcaatctcgatcggcaagactctggcagttcatggtgaccaaggtatactagctagtactaccttcaattaattcctgcctagcttatggtcacgagctagcttctctctctaattgcagtacaggatgtctccattcgcaaactcgagggcgctcccttgctccggccggaacacctcgagcgccaccgccgccgccgcagcagcagccgacggcgagtgcagcatggcggcgcggcggtggttcgaggtggtggacctgaggctggcgctgcatgggttcctagtgttcgaggtgtcgtggagagacgtgcacggcatcaactacctgaacgagctgctgacggacacgtcgttggcgctggaggcgaggtacatgaagaaatgggagttctacagcgcggagcaggcggccggctgcaccaagctctggttccttggccgcgcccccgaggctgaggcgctgcgcggctacctcaccaccctctactccctgtcccaagacaacgtcgttgataacgacgacaaggacaacaataatattaatactagtactagtaatatgcggcggctgattcatcaacagatccgacgttcgtcgtcgtcggagtcggacaagaagaaggaggacgccgatgatgaggatgatcaggcgccttcttcgtcttcttcctacaccgacacgctgatcctgctccggtccagggacagcgcgctgccgatgaagctgaggcagatcatcatgtcggacatccggctgctgacgctgctggagtctggcctgccgtcgtgggtcatcttcctgcagtcgtacccgctgctgtgcctgctatacaggccgtggatgaggcccctggcgcggacgctctacctgctggtctccctggccaccgtcatcatcggcttctacgacctgtacaagaacgtgccgctgctcaaggccgcggcggcgcgcgtgtgtgggccgctcttcggctggatcgagacgtgggacatggtcacccggatccagtacctgggcaccatcctcttcctccggaaccacctgcgcaagtgcctgcaggggatggtggccctgctgcgcatggccagggcggtgctccgtccgctgtcggctccgctgtcggccatcgcggggcccctcctggccgcctgcggcgaggtatgcgagctgctgggcgacctggcggaggcgctgtgggcgcccttggacgccgtcctggactgcctcaacccgctggtccaggcgctgctccttccgctgcgtttcgcggcctctcttgcttcctgcgcgggctcgctgctctccaacacctacaacttcggcaaggacatctgggagacggtgagcagcatgttcgagctcaaccacatggccgaggcgcagcacagcgccttcgacgtctccttgctcaagtctctctggaacgatctcttctcccaggtacactactatatatacatatacactatactcctagctaactagtactatatcgattcatacaatatccctctgtgtataatatacacccatttatatgtataattaatagatcttccgggcaatcaggagcatactgaatggtatactgctcttctttgcatcttgcaacaggcataggctcaggtaaccctactacaagcttaattaattcggaattgctaaagctatgtcgatagaaaatcatacctcaaatcttgcaaattttggatcactggatgtgcttcacgattcgtgctcttctccaactccggcgaccacctcttcttctccaatgccagcgaacccaaactctggtagagggccgacgaattaggtcccggggtggggtgggggtgggggtgggggtgggggggggaatagggaagaggagggggggagttcgccggctttagagggatggccgtgggaggcggcaacccggcggtgggcggtggatcgagcgggcggcgaggcggcggcggcggcggcgccgaagccgcggggctggaggacggcgacgggccggtgtaggcggcgggggcaaagcgggaaaagtggtaggaggaagcggccggtggtggcgccccgccgccggcaacagggaagacgacggacagctcgccaccgccggcttgaggcaaaggagaggagagggagggggaggggaagggggccggtcgggggggcctagccggcgccgttgacaccttttggccggccggcgaggtcgggcggtggtgcgctggggcagcggcgacagtggcggaggcgggtgggaagcgctgaggagcggcggcgtgtgaggaatcgggagaggagagaggatttttaaggttttgttgcctgcacgaatcttaaagcaatcgggtggtcaaaaatttacaagatttgtgagggggttttctgtcaaatgatctatagacattccctaattaattagggtccacaaattgctctcgtgtactgtacaactactagttattagagcaagtttaatagtatagcccactactagctccaattcatctaatagccaatctaatagctaattcatataataattgcttactatactattagtatatggtcctacctgtcatacacatattgcatcttggagtctttgctgtagctggctatagatctgtagcccgctgctattctctcttatcttttatcttattaaaatatgttggtacctggctaatagttacatgctcttagtataataatttactgaatacactatgcgcggggcactcctgcctgcgcgcgcagcatctacaaccatgtgcaggcaaggctgcggcatatgctccacgtttctaggttggcgccctattcatgtccatgcaagaccaagcgccgtctggagggacacgataaagacgaggtaaaacagacacgcctcttgtactggttgatacacagtgttttactgcaggttatatgaattaatacattttatacgttatagaaatagtgtgtgtatatgagaataatgtgaagataacaatttgatatcactcgcatattgagctctaaaaatacaactgtaactgatatattatgtttgcatgatatttaaaatattctagataataattgctagtgggtgatgatgtggcgcaattgcatgtaatttaaaatactctagataataattgctagtaaatgatgatgtgtcaaacttgtatgtgatttaaaatactctagataataattgctagtaaaggtgatgatgtgacacacttgcatgttaagttttaaaagttatttagcatcaacttttatagtaagataggatatgcaactattatcatatttttccactcatttttaagtacgtggagctaaatttaaatgttgtttacgtttatataactgtatacatatatgtcttatatatccatgtatacaaccatatcattccatttattctttttataaatacaattgtattttaatctaaacccaccatgcatgattaaacacagtaaatatacattaatttctccttttctcctactcacttagtaatattttaaatctccagagtgaacacgtggctcttcaattgttaataatacaaaacaacttacatatgcaggacgatgttgtcgaatgcgatatctgcaaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0597400, RefSeq:Os05g0597400