Os04g0101800

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Revision as of 10:55, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0101800| Description = The start codon is not identified.| Version = NM_001058528.2 GI:297602028 GeneID:4334888| Length = 3588 bp| Definit...")
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Gene Name

Os04g0101800

Description

The start codon is not identified.

Version

NM_001058528.2 GI:297602028 GeneID:4334888

Length

3588 bp

Definition

Oryza sativa Japonica Group Os04g0101800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:112189..115776

Sequence Coding Region

112474..114285

Expression

GEO Profiles:Os04g0101800

Genome Context

<gbrowseImage1> name=NC_008397:112189..115776 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:112189..115776 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggattagggattattactagtcttgttgtacttgttgattttgttgagagaaaagaaaagaaggaattgattgctaaagaaataaataatgttggatggatgcagagccggtgcggcgtgtgctcccacggcgtgaagaccggcgcggcggcggtgttcacggcggagtgctcccactccttccacttcccctgcatcgccgcccacgcccacgccctcgccgccgccaccgctctctcctgccccgtctgcgccgcgccatggcgccaggcccccttcatcaacaagcgcaccaccaccaccgacgaccacaagcgcaagtcctacgacgacgacgagcccctcctcgcgcccaaggccgccgccggcgccttcaaccctatccccgaggacgacgaggacgacgccaccgagttcaggggcttcttcccggcgcgccccaggagcgggctggccgtcaccctcgccccggacgccgccctcgtgtccgctgggcggaggcacggcaagtacgtggtggccgtgagggtgaaggcgcccgccctgcgctcctcgccctccacgcgcgcccccatcgacctcgtcaccgtcctcgacgtcagccagggcatgatgggcgacaagcttcacatgctcaagagaggcatgcgcctcgtcatcgcctctctcggccccgccgaccgcctcgccatcgtcgccttctccggcgccgccaagcgcctcctcccgctgcgccggatgacgcgccagggccagcgctccgcccgccagatcgtcgatcgccttgtcgtctgcgccgccgcccagggccaggaacagccgcaggccgtctgcgttggcgacgcgctgcgcaaggccaccaaggtgctcgaggaccgccgcgaccgcaaccccgtcgccaccgtcatgctcctctccgacacgcagcagcagcagcagcagcagcaggatgcgatccggcgcccgccagccgcccctccggccacgcgattcacgcacgtcgagatccccatcgggccaggggaggagccggcccggtcggcgctggtggcggaggaggacgacgaccagttctcggagcacgccttcgcgaaatgcctgggcggcctcgtcagcgtggtgatgcaggaggtgcagctggagctggcgttcccgacgggcgagatcacggcggtgtactcgtgcggccacgggcagcaggcggtggcccttgggggcggtggcggcggcgcggcggtgagtgtctccctgggcgagatgtacgcggaggaagagcgggagctgctggtggagctgcgcgcgccgctgagccagagccacccacactcgctgtccgtgcggtgcagctaccgtgagccggcgtcgcaggagacggtgcgcggcgcggagcagcagctggtggtgccggccctccacggcgggagctcgtcgcggcggctgcacgacctgttcgtggcgacacgggcggtggccgagtcgcggcggctggcggagctgaacgactacgcgacggccatccacctgctgtcgtcggcgcgggcggtggtggtgcagtcggcggagcaggggctggttggcagcctggacacggagctgagcgacatgcggtggcggcgcgggcagtcggcaggcaggcggcgtggcggcgagtcggaggagactccggtggggacgccgcgggcgcgggggggagagccgctgacgccgacgtcggcgtggcgcgcggcggagcagctggccaaggtggccatcatgcgcaagtccatgaaccgtgtcagcgatctccacggtttcgagaacgccagattctga</cdnaseq>

Protein Sequence

<aaseq>GLGIITSLVVLVDFVERKEKKELIAKEINNVGWMQSRCGVCSHG VKTGAAAVFTAECSHSFHFPCIAAHAHALAAATALSCPVCAAPWRQAPFINKRTTTTD DHKRKSYDDDEPLLAPKAAAGAFNPIPEDDEDDATEFRGFFPARPRSGLAVTLAPDAA LVSAGRRHGKYVVAVRVKAPALRSSPSTRAPIDLVTVLDVSQGMMGDKLHMLKRGMRL VIASLGPADRLAIVAFSGAAKRLLPLRRMTRQGQRSARQIVDRLVVCAAAQGQEQPQA VCVGDALRKATKVLEDRRDRNPVATVMLLSDTQQQQQQQQDAIRRPPAAPPATRFTHV EIPIGPGEEPARSALVAEEDDDQFSEHAFAKCLGGLVSVVMQEVQLELAFPTGEITAV YSCGHGQQAVALGGGGGGAAVSVSLGEMYAEEERELLVELRAPLSQSHPHSLSVRCSY REPASQETVRGAEQQLVVPALHGGSSSRRLHDLFVATRAVAESRRLAELNDYATAIHL LSSARAVVVQSAEQGLVGSLDTELSDMRWRRGQSAGRRRGGESEETPVGTPRARGGEP LTPTSAWRAAEQLAKVAIMRKSMNRVSDLHGFENARF</aaseq>

Gene Sequence

<dnaseqindica>1492..3303#gcttggtttggttcctctctgcttctctctcttttcctccctccggcgaccaccagcataccataccatcgccggcttgcttgcttccttccttccttccttgggggagagagagagtgtgtgtgtgatggggacggggtggcggagggcactgtgcacgtcggtccggcgagatccggagcaacaagaggtgaagaggcgaggagaggccccaagcccccggtgtggaggaggcagcaggctgggtggcttcttctccgccatctccagcagccatagcagcagtaatccagcaacaacgacgcccaccctgcgatgccgcaccaaaccaaagccacagtccagcagcagcgaccaccagcagcagcttccgtcgtccgcgccggcgcccaagaagaggatgcctctgctgcaggctctctccgtgccatcctcgcccagatccccctccagattcgccctcctcaaggcctccatcctgcccaacaaggtaggtacctcttcttctccttctttagaaatgatgatgactcaaatgaagaataaatagctcctgcctgccttggccctgtgatcccccatgcatatcatatatattatgctcttcttcctcttctaatctggctgtagcggcggacggacggagatggagatcgaatcgatcaatcattgccaccactctctcttttgtcctaatccccttcccttccctcccctccttgagattcgattcgattcgcctcacgcaataataataataattactccctccgttttaaaatatttgacacagttgactttttagcatatatttgatcgtttgtcttattcaaaaacttttgtgaaatatgtaaaattatatgcctatataaaaatatatttaacaatgaatcaaatgatagaaaaataattgataactacttaaatttttaaacatgtgctaaaaattcaacggcaggtagtaaaatggaggtagtaactaataataacatcacaggcagaggagcagctttccttccgtcctgcaactgcaatcccccaccccgccacttcctcttttctttttgtttctttttaaatttctttcttctgggaatgggagtgacaatgcgagtgagaagcagaatggaacccatgaaattaacggtgaaggtataattgcagatataggtaggtagagatagatcgagaggatggatgatctcgaacaagatgtaaaaggatgatgatgcagggcccaaaggaagagagaaaggctgctcctctcttttggagtatgtcaaacaacaagtgaaaggctggctggggattggggaaagatggatcagattcagatcagatcgcccagctttttcttgattttgatcctccatcgattaccaatcaatcaaatgcctgccaaaaagaaagatcctccagcctttctttctttcttaattttgctccatccacagcactccactcactgtcgactctgtttatttagtttagggattagggattattactagtcttgttgtacttgttgattttgttgagagaaaagaaaagaaggaattgattgctaaagaaataaataatgttggatggatgcagagccggtgcggcgtgtgctcccacggcgtgaagaccggcgcggcggcggtgttcacggcggagtgctcccactccttccacttcccctgcatcgccgcccacgcccacgccctcgccgccgccaccgctctctcctgccccgtctgcgccgcgccatggcgccaggcccccttcatcaacaagcgcaccaccaccaccgacgaccacaagcgcaagtcctacgacgacgacgagcccctcctcgcgcccaaggccgccgccggcgccttcaaccctatccccgaggacgacgaggacgacgccaccgagttcaggggcttcttcccggcgcgccccaggagcgggctggccgtcaccctcgccccggacgccgccctcgtgtccgctgggcggaggcacggcaagtacgtggtggccgtgagggtgaaggcgcccgccctgcgctcctcgccctccacgcgcgcccccatcgacctcgtcaccgtcctcgacgtcagccagggcatgatgggcgacaagcttcacatgctcaagagaggcatgcgcctcgtcatcgcctctctcggccccgccgaccgcctcgccatcgtcgccttctccggcgccgccaagcgcctcctcccgctgcgccggatgacgcgccagggccagcgctccgcccgccagatcgtcgatcgccttgtcgtctgcgccgccgcccagggccaggaacagccgcaggccgtctgcgttggcgacgcgctgcgcaaggccaccaaggtgctcgaggaccgccgcgaccgcaaccccgtcgccaccgtcatgctcctctccgacacgcagcagcagcagcagcagcagcaggatgcgatccggcgcccgccagccgcccctccggccacgcgattcacgcacgtcgagatccccatcgggccaggggaggagccggcccggtcggcgctggtggcggaggaggacgacgaccagttctcggagcacgccttcgcgaaatgcctgggcggcctcgtcagcgtggtgatgcaggaggtgcagctggagctggcgttcccgacgggcgagatcacggcggtgtactcgtgcggccacgggcagcaggcggtggcccttgggggcggtggcggcggcgcggcggtgagtgtctccctgggcgagatgtacgcggaggaagagcgggagctgctggtggagctgcgcgcgccgctgagccagagccacccacactcgctgtccgtgcggtgcagctaccgtgagccggcgtcgcaggagacggtgcgcggcgcggagcagcagctggtggtgccggccctccacggcgggagctcgtcgcggcggctgcacgacctgttcgtggcgacacgggcggtggccgagtcgcggcggctggcggagctgaacgactacgcgacggccatccacctgctgtcgtcggcgcgggcggtggtggtgcagtcggcggagcaggggctggttggcagcctggacacggagctgagcgacatgcggtggcggcgcgggcagtcggcaggcaggcggcgtggcggcgagtcggaggagactccggtggggacgccgcgggcgcgggggggagagccgctgacgccgacgtcggcgtggcgcgcggcggagcagctggccaaggtggccatcatgcgcaagtccatgaaccgtgtcagcgatctccacggtttcgagaacgccagattctgattctcatcatctatcaatctcagctcagcttgtaatcaatgataattttcttttctttttcattttcattttcattttcttcttatgtgaaatgaatcaacaaacacaagatatgtctccacgacgaagaagaaagaagaaaggcagaattaagaagagggaggagtccctgccggagcgcggcggacgtaaattacatctactccctccattactgttttctttttctcttctctttttgtactcctattcaaaaatttgaactagtttagacagtctcatcct</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0101800, RefSeq:Os04g0101800