Os04g0102500

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Revision as of 10:55, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0102500| Description = Similar to Phosphoglycerate mutase-like protein| Version = NM_001058529.2 GI:297602030 GeneID:4334891| Length = 4949...")
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Gene Name

Os04g0102500

Description

Similar to Phosphoglycerate mutase-like protein

Version

NM_001058529.2 GI:297602030 GeneID:4334891

Length

4949 bp

Definition

Oryza sativa Japonica Group Os04g0102500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:167849..172797

Sequence Coding Region

167950..168101,168449..168521,168626..168733,169698..169781

Expression

GEO Profiles:Os04g0102500

Genome Context

<gbrowseImage1> name=NC_008397:167849..172797 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:167849..172797 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtccagctgctccagcactcgcatctgcacactgtattcgccgccgcgaccaccaccatcggagtcggacagtttccccgccgccgtgccaaattccccacctcccttgttcttcttcctcgctgcacctcctcctcctcctcctcctcaggagctccaatggacgccaatcctcctaccaccgccatgtatcctctccaccgctgcaaaaccatctacctggtcaggcatgcccagggtgttcacaatgtggaaggcgagaaggatcacagcgcctacatgtcgccccaactctttgacgcccaccttactccattgggctggaaccaagttgactgcctgcgtgagcacgtgaaaaaaagtggacttgcacaaaagattgagctggttattacttcccctctactgaggtag</cdnaseq>

Protein Sequence

<aaseq>MVQLLQHSHLHTVFAAATTTIGVGQFPRRRAKFPTSLVLLPRCT SSSSSSSGAPMDANPPTTAMYPLHRCKTIYLVRHAQGVHNVEGEKDHSAYMSPQLFDA HLTPLGWNQVDCLREHVKKSGLAQKIELVITSPLLR</aaseq>

Gene Sequence

<dnaseqindica>102..253#601..673#778..885#1850..1933#acgcatccccgtctttctttctttctttctttctttctttgtgcccaactctgacacgactcacagtttttttggcacgagctgaaagcctcaaagtagtaatggtccagctgctccagcactcgcatctgcacactgtattcgccgccgcgaccaccaccatcggagtcggacagtttccccgccgccgtgccaaattccccacctcccttgttcttcttcctcgctgcacctcctcctcctcctcctcctcctcaggtacctcatatatagcttccacctacttatccttgccccgcctgattcattcatacgaccacttctttctccggatcccctctcctctcctagcttcttcctctatctgtacattcgcaatatcccatcccatcggatcggattggatccacacaaaaatccccatcactgccggccgggccccaaacccaacgatccctccccgattccaatttcttccttcctgcaaatttaaaggatttctttcttcctttccttttcactgctcttttatttttttgagtgagttaacccccactgttgttattctaatggacgcagattctattttctttgtcttttaggagctccaatggacgccaatcctcctaccaccgccatgtatcctctccaccgctgcaaaaccatctacctggttactacttcctcctatgcttttccaaatactcctactactgctcatcgatcacaatgtactgtatttccttagccatcagtaatcctttcctgtccctgcaggtcaggcatgcccagggtgttcacaatgtggaaggcgagaaggatcacagcgcctacatgtcgccccaactctttgacgcccaccttactccattgggctggaaccaagtaatttcagccttctctctctctctctctctctctctctctctctctctttctttctttctttcacaaattgatctacgtacttttcctgtttcaatcatgctagtctgggctcttagttcagtatacaacacaaaggagtggatctcttaccaccctacagtgacctttccttctttctgatattctattgttcacttgttcaatcaaaccaaagtaaatttgttgcacaaaatgaatattggaatccacactcacttggtgtgatttcggtattaactcatcctcatccatgataaataaataaataaatagaattctgaagacgcttacactctccattttcacatcactaatatttgtaaaactatgatggtctgatatttgaaaatgacattagtacatttatcatgaaagacactttcatatggttataaaaaattgaagataacataaaatatgcattgtggaccatatcgatgacctagttataaaacaaaaaaaatgaacagaagtagtatgatgcaaaatgtcttattaagtaaaaatgaacagaagtagtatgatgcaaaaaatctttaacagaaagattttttttatacttttagtttgagatcataaagtaaggcctgctatattcgttttacatccctgaaaaatctgactttgtgtgacgagatcatcttttcattcataaactggcttatgcaaagaaacactgtattgcgtttactgattttgtgtgaaacttccatgtggatggatgaagcatggaaggttatatttttagtcatgaatggtattcatgttcttatacaaagtagaaatgtctggtactccaggcatatcagatgcaaaatgttatgttagtgtatatatatctcctagcccctacctgcaggaaaacagcgcaaaaaaaaataattgcaagttccattattagtttgtttgtgtacatttgtaggttgactgcctgcgtgagcacgtgaaaaaaagtggacttgcacaaaagattgagctggttattacttcccctctactgaggtagtttttccttgaccttcttgtatatgttttaagtgttccaatactcttctaagcttcctaaatcctaatatgtaataaatggtgctattctgcataatctactataataaattataccactgcttaatcttaccaactagattaatctagcaaatcggtcttttaatcttttaactgaacatggtatttggaaggcctacaagatacacctgtgttctattattgtccctgatatatatgtccgctggtgatcacttggtgaaccttaagtccttaacagatataccacaaaatcgtacacgttcagtaattagtaatgcatatcatggttttagccacaagagcagcattggcttatttcggatttgggccagaagctcagaactccaagctttgtagtatatgctcacctggttgggtaaaattatgatactcacatgtaccatgttgcatacaagtgtgaattttctgcacgatcaaacaagtttgtggttttctgatgttctatttttaaatgtaaataacaagcataagttggaaacctttatgtgcattagtaaatacccatgaggtatggacatcattcgggcatgcctgtatttttcttgcagcatttgttgcagggctaatgtgccttggatctactatagacaaaattcagtttatcagaattgcagtgcctagtcataacataatataatgttgcattgcagtagtgtgtttctaaatcagcctcaccattaatttcacaggactatgcaaactgcagtcggggtctttgggggtgaaaactctgttgatggagtaagtgcaccaccattaatggtggaaaatgctggacatagtagccggccagctatttccagtttgaactgcccaccgtttcttgcttttgaggcctgcagggagcacttggtactttcttctcctaaaacacatttaaaatatgaagtgcttattgtacgtgccatgcttgattattgtaattaaacatgatattggtctgttgctagaacctatttactttactgtgcaatagctttaaaattggatatgctgtttgagaaattgaatattttgctttatctctgtagttctctcacaccaatatcctcatgggttttgtcaatacacttccataaatttattttttctttgtttgatcctttgttttatgcagggtgtgcatccctgtgataaaaggaggagcattacagaataccacgctctctttcctgccattgatttttcgctggcaagaatcaatctctgttgtttctcaatcatcagtcattactgggatctctttgcttcaaatgatgttgcaatgatgtatcataatatttgcatgctcattttctttacagatagagaatgatgaagatgtactttgggaaccaaatgtcagagaagcaaattcatctgtcgcagctaggggcatgaagttcattgactggtaattatatttttataaaatcaatcaatttctttcaataatgtccctggaacgcaattaccatcttgcatcgcgtcttttgtgtacacgtgtatcataaaaaacagtttggtcaattggtactatataaggtttgtgtgtagcactcatgtcaaaagtgtgtattggttagacagaagtcaacttgcatctctctgctatatgtcatgttaggtggaacctgaaattaagctaattttgttgcatctatattgactatccaatgatttaaagaacaaatatagaaagaaaaaatgaatgctggtcggaacaattttataacagggtcattcaacagaggatgtacccttcctctagaccacatatacttgtttgcatgcttttttaccatttaacagtgtacttattttttacggttgtctctctgttctcatgttaatggattgttggcatgcaatattttatattggaagacccttagatgcagcagcaagattagaacctgttacacatagcattttaaaaggattggattttttctcaatgtaatttcaggttatggacaagggaagagaaagagatagctattgtaagccatagtggattcttatatcacaccttaagcatgtacagcagggagtgtcatccaaccataagagaagaagtgggcaagcagtaagtgcctttacactgagaatccttttggctcggtagttgccaattgtcatcatattcttcaactatatgccgatcatattaatatattcacaagacatcacctgttgatacataatgtgtaacataaccaaattggactgcactcctttaaagtcccttatgcttcgtatccttatcacgctaccgaataggattaccctttttttacattttggtttccttgaacattgttggcacgataattctactaaacgctaaaaatgttagaatcatggttagttgcatcaaaggatcgtttgcctaacattgatttgtttgtatgcagctttgccaactgtgagctccggtcgatggtgttggtcgatacaaggtcagttttgcgtcctgatgttccaatggtatatgctttgcattcttttaacaatgaatctgctgacaatttgcattctgtattggtaatttcaatgctgcagcatgcttgggtctgattcccccagttacaactaccctggaagtattccagctggacttgatcttcctagtgatgctgcaccttgagcaaattcaagacctgtgttagagattgttaccgtgcattggtgccttgattatttttcccagcccattgacactattcaagctagcactggaagtcagaaacttgggtgaattcaaacagcatctacagatagaacttaccatttgttgcccaaaagtatgatcacgattttacaggatattttatgcttacaactttagagcatatcatgttttaaaattttacaagatactttatgtcgtatctcaacacgtactgaacttgactgtaataaacgtacgatttacatattttactcatgtactttgtgttgcttttgtttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0102500, RefSeq:Os04g0102500