Os04g0105000

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Revision as of 10:55, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0105000| Description = (Uracil-5)-methyltransferase family protein| Version = NM_001186800.1 GI:297722730 GeneID:9271204| Length = 7614 bp|...")
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Gene Name

Os04g0105000

Description

(Uracil-5)-methyltransferase family protein

Version

NM_001186800.1 GI:297722730 GeneID:9271204

Length

7614 bp

Definition

Oryza sativa Japonica Group Os04g0105000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:311857..319470

Sequence Coding Region

316623..316823,316898..317032,317195..317290,317452..317946,318715..318758
,319054..319297

Expression

GEO Profiles:Os04g0105000

Genome Context

<gbrowseImage1> name=NC_008397:311857..319470 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:311857..319470 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtatatttgcaactacggaatcttttactgctcatgcaggatcacaaaggaatttcaaatgctgcaccagctgattgtccattgatcccactattggtgccaaaagtagatcaatcagaaggtacagtggataaaacaagaatccatgaccacatcggtaatctgtggttctccatatcaccaacagcattttttcaggtcaatactctcgctgcagaaagattgtatacccttgctggtgattgggccaacctcaattcgggcacattactttttgacgtatgttgtggaacaggaacaattggactgaccttggcacaccgtgttggaatggttgttggaatcgaaatgaatgaatcagcagtttctgatgctgagagaaatgcgctcattaacggtgtatcaaattgtcgctttgtctgtgggaaggccgaagatgtgatggggtctcttctcactgaatatcttggttcaccgcagcaggacattcctgtttctgaaggtgcagtaagtggtactgtgaaagatgaggaagttattgacagttctaagaatagtggcgaaaatttggacagctcaatgcagaaaaatgacaatggcgaaagccagcagctcggggatgcaccagctgattcttcctcttctgccatagatgagataaaggggaattccaatgatagggttggcaatgggttggaaggcagccatgatgaatacaatgaggttgctggagaagatattcatggggaagcatcattgatcaatgagtctgttgacctgaaagtatcggactgtttggaggacagaaagacatctgatgatggttcttccatttctaacaatgatgtgactgcagctactgcatgtcagttcgaagacattgttgctattgtggatcctcctcgtgttgggcttcaccctactgtgatcaaggcattgaggactcatccacgaattcgacgtctagtgtacatttcctgcaatccagatagtctagttgccaatgcgattgagctgtgtaccccatcatctgagaaacaggaaaagaacaaaggaaaccggggatggcgaaccatgagcagcgctggcctcgcgaggcagcgtacaaagtcgatgcccaactctgagccatttgttcccaagagagccatggctgttgatttgttcccccacacctcgcattgtgagatggttatgcttttcgagaggtga</cdnaseq>

Protein Sequence

<aaseq>MVYLQLRNLLLLMQDHKGISNAAPADCPLIPLLVPKVDQSEGTV DKTRIHDHIGNLWFSISPTAFFQVNTLAAERLYTLAGDWANLNSGTLLFDVCCGTGTI GLTLAHRVGMVVGIEMNESAVSDAERNALINGVSNCRFVCGKAEDVMGSLLTEYLGSP QQDIPVSEGAVSGTVKDEEVIDSSKNSGENLDSSMQKNDNGESQQLGDAPADSSSSAI DEIKGNSNDRVGNGLEGSHDEYNEVAGEDIHGEASLINESVDLKVSDCLEDRKTSDDG SSISNNDVTAATACQFEDIVAIVDPPRVGLHPTVIKALRTHPRIRRLVYISCNPDSLV ANAIELCTPSSEKQEKNKGNRGWRTMSSAGLARQRTKSMPNSEPFVPKRAMAVDLFPH TSHCEMVMLFER</aaseq>

Gene Sequence

<dnaseqindica>4767..4967#5042..5176#5339..5434#5596..6090#6859..6902#7198..7441#gttttgttccgctgaaagccctgaaaccacacgaacacgcggctttgcttcggtttcgttgcccctccgccgccgccgccgccgccgccacccatggagatggagatggaggacaacaaggcgccctcgccgccatcacctatggagtccgacgtcgctggggagaagcgcaagagggaggacgatgcatcctcctccgctgtacttgccgccgccaacaacaccggcggtgcccagcaccccatgtggaagaccagcctctgctccttcttccgccgccgcgccgcctcctccgccgacggctgcagccacggcgactcctgccgctacgcgcactccgaggaggagctccgcccgcgccccgacggcacctgggaccccacctccgaccgcgccaagaagctccgcaaggtcgccgccgacgaggtggaggaagaggtggtcaccattgacgacaaggccctggacaagtgcctcgtcggcctcccgaggggatgggccaacgacaggctcaagactttcctccaagacaaggcaagaactaactactcctccattcttcctcctgctctactactagttttttcatcgttctttcttgttttaccactgtctactccaactagtacaaaattctcacactctttcgattatatcttcctgttttgcaccaacagatattggttcagaatgagtttagttgataagctctagaatcgaaactattgatcaacacatgattcaagtccttacagctgatatcacttgagttagcttggtccaaaagtcctttgacaagcaagaaagtaacttttcatcaccttagcttagtctggtatttttgtataggttgaaatagattactataccgtcgcaccattatattattgtaagataagagcatctcaaatacattgaacaagtaacttttcaaattggtgagattataataagtttatctgttttgcaacatgtggatgtggctatgatgacattaaaatgaaggtatgccatggtatattggtcatctcgtaatgttgtgtcattttgattcatagaaacttgaatggatgaattgcattttttaaaaaaaaagtcaaaccttgatgtttgttaatagattatgtcatgaacacatgacacatggaagtacactgtttgagattttgagtaatactggaatcattgatccagtcataaataccttaatacaagtcatcccaataattcctgtataccagtgattctacctaaaattcgaatccgagtagctggttagatgatagcatgaaccaaattattccattcagcatactccaattaatgcatgcttgtacttgtagtaagtatacatgaacgatggaattcttttgcattacgtccctcaactcttgttgatattgtggacaaatagaagcatggtcaaatattggaagcttgtctcaaagcttcatcttgctctcccagatataaattcaacttttcttgcactaatgctgaaatactactgcttggttcaaccttgagttattgaaaaatgtgcgatgttcgaaaataattcagaaactaggactataatttttagggttatgataattaattttgagaaatctttatcaaggtctgacatggtcaatactaaaagagaatcggtttagtttacagatatttcacaatggaaaggagtttttttcgtaattttaagttgtgtggtatgcatatttattttgaggcttctgaaatctgtacttgtttcatttcttttgtacaaatacacttgattagtttggctagtcttttataaatatataacagtacttacagtatccctagtgctaggaaagaaatcatcttcagtacctgtatgaagcacatttagaagtaatggattaagggacaaagaggtgatgataataaccatgcagatatcatgtttatctggtttgtaaaaatattgaaaaagtaaactcccaattttggctttttaaaaaaacttagaattgcatgcttatcttgtgtaatactccttccattttactattttttgtccaaggctttcatgcccattatgcacatagaccaagcagtggtagtctactagatttaaaataaagtgggattgtataaaccaatcaaatgacatatggaatctgctcaatcgtttggctctttttcagcactaaagtagtagagagtgcaaaaactataaatatttggatagcttcattttttattttctcagtagacgaatgtgaaatgacactttccaaggaaatagtcacttgcaagacagagggaacatattttcattcctagaaagaaggatgcagtttgcagctttaaatcatgttagattatgccaacctaaatgctgtaacttcattgatggtgatgcagggaatctcgtatgcaacagcgaagaagaagaagggaatgactgttggttttgtaacttttgaaaatattgaacagctgaagaatgctatcgaggtaattattggtatgttcatattggaacgtgtttgagcaactgggaagtgacaatgactcttgcatattaacttgagtaggtacttacagagaaccaatctggtggaaaggaaataaagatagcagatgccaatcgtagatctcatcaaaagctgcacacagaaaagcctgtatctgacaatggagtgacaacagaaaatggtactagtgttgatgttcctcctggggagacatctgcacctgaagcagcaatatcaaataaaaaaagtgtccgcgatgcagttactccccttgcccacatgtcttataatgatcagctagagcacaaaaagaattctgttgcgcagatactgaagaggcttgtaagatcaaaaccataatcttcttctacctttttgtttgcttgaatcattagtaacttttcttgttatctacttccgcagactcgcaatgctaggaaagcttgccctactggcattccccttccagattgggtttttaaatccaaagaaattggtagcctcctactctcattatgttgtgtttgatataactaagatatgcttagtaattgtggctctaaacacatgttctgtgataagattgtttgggtagaacacgataattttatgtactatttattcttctggtggctaataggaaaagtgccaaaattgtagtggggatttggatgatccaaatgcataaattttcttataatttccaccctaataacagttaaaactagtattatatatggcaggtttttagttaaagacttaaagttagtaaaatttcataatgcaagttctagttaaatgaaagtgctatgctcctcacttataggggaatgagtatatgtatttgattaggagtttaataccttctgtccaagcatttgtacatttcatttattccattttcctctttagtttgtcatgattatattttaaatcatgcaggtggtcttccttgcaagcttgaaggcattctggagtccccagtgattaatggataccgtaacaagtgtgaattctctgtgggattttctttggagggaaaaaagacggttggatttatgcttggaaattttaggttggtttccctatttgttttctgtttgttgttcgtgctcagcactaatgattgacaaaacaaaatccagggaaggtgtgactgctgttgaggaacctgtggactgcccaaatgtctcagaaatttcctgcaaatatgctctgatgttccaagactttctgcagtcatcaagcttgcctgtgtggaacagagttgataattgtggattttggcgtcaattcacagtatgatctctcaaagcttttcaactctttcagtgggtgcttatatgttcatttcctgttggtatattatacactttatttgaactattttagttctgggataataatttctcagactatggctgctgtataggttcgggagggaagatgtcaagctcaagctgttgcacagaatgcagaaaaccaaatatcagaagtcatgcttattgttcaggtagtacctcattctcaaatagatggtgctttagaatgtgctctatcaaacctcataaacttttggtggagaatataaaaaattaatacattaagacttctcatgtcaaaatgacattagtagatctgtgacatctgtcatgaaaaatatatttttagtagttttgaaaaacataatactataataagtactggttcaaaggtgcgtgacaagggaacagaaggattgtaacatcaagaatcaaaatgcattgtatactacgagtcctgtagatcacatcagtgcaatacatgttcctactggcagtattgtctgacttcctatgttcaggtttgctccacaggtgttgatgatgcagtaatgaaagatgaatttgacaagttgaccgttgccctgcaacaaggagcagcaacatgctcacctccattacctctaacaactatagtagtgcaagtaagtttgagttctttgtctggaagtaagacttctatttatagtttcctccattgcctcaacatttcagcttgtctaaactgaccactcttataagttttattactttatactgtagatgtcttgctgtcctgtaactcaatatgctacccactaatatctaggagttaccattgtactaaaaatgtataaaacatggttgataggagttcagaaagtgcatttatctgggttcatccgatcactggtagaatatgttaccacttgaaccaaactttatgtaatttataatggtatatttgcaactacggaatcttttactgctcatgcaggatcacaaaggaatttcaaatgctgcaccagctgattgtccattgatcccactattggtgccaaaagtagatcaatcagaaggtacagtggataaaacaagaatccatgaccacatcggtaatctgtggttctccatatcaccaacagcattttttcaggttagctaaaactgcagacagctttgtccattggctatcacggttcaatttggtaatgactcactattacacaggtcaatactctcgctgcagaaagattgtatacccttgctggtgattgggccaacctcaattcgggcacattactttttgacgtatgttgtggaacaggaacaattggactgaccttggcacaccgtgttggaatggtgatttcctccattcatttcatgtgatagtgcatgatacttcttattacccgtataatgctcagccacagctgggctctttattaacttatgtagaattttggaaatgtcatggtagagaagtcaatgaatgatttagcgaattccttgtcaaatgtgcaggttgttggaatcgaaatgaatgaatcagcagtttctgatgctgagagaaatgcgctcattaacggtgtatcaaattgtcgctttgtctgtgggaaggtgaggcttatgcccttgtattcctagaagtttctatcattctattgtcactgactcactgtagccaccatggtgtcaatcctattcagtttttcttatgtcctactttatatactcaccacatcaggctcatctgaattttacatcttgggattaaacaggccgaagatgtgatggggtctcttctcactgaatatcttggttcaccgcagcaggacattcctgtttctgaaggtgcagtaagtggtactgtgaaagatgaggaagttattgacagttctaagaatagtggcgaaaatttggacagctcaatgcagaaaaatgacaatggcgaaagccagcagctcggggatgcaccagctgattcttcctcttctgccatagatgagataaaggggaattccaatgatagggttggcaatgggttggaaggcagccatgatgaatacaatgaggttgctggagaagatattcatggggaagcatcattgatcaatgagtctgttgacctgaaagtatcggactgtttggaggacagaaagacatctgatgatggttcttccatttctaacaatgatgtgactgcagctactgcatgtcagttcgaagacattgttgctattgtggatcctcctcgtgttgggcttcaccctactgtgagtaaatttcaatatcttagtccattcttgttacaattgtttgcccctttatattccaaatgcttccatgcaaacttcaaaacatgcccacaaaattgatatcctttatttttattgtccattattctaatctacatatcctaataaatttaaccaaaactatggattttatgtatatgttctttaattatgcaataaaattagtggttttgtgttttttgtgtgagatttatacctaacttttactgattcctactggttaaagttgagcatatatgcctgagtaggtataacatggttcaaagcaggcaatggaagaaccatgacctaaactggcctagatccttttctggtccatttttttactagttaaacagccaatccattcccacttcgcatgattttgatcttcaatagagatatcactaaagtgaagaaatgaagaatctagagaaaatcaagacaacatgcaactaacagataatgtaaatataatgagcttcctgtgacttttcactgtctgcatactgtgaagcattaaaccacatttttgtcacttacaatgaaactagatttgtatcccatatgcatatgaacctatccatacacatacatgtgctgccaataaatgcatttctggtcaattccaaatatattgattcattgtatgtgtcctatacctttctttcttatgtatggtgttgagtattttaattgaactatcgactcccatggaggatcaagcttacacactgaatttgataggtgatcaaggcattgaggactcatccacgaattcgacgtctagtgtaagtatcttgtgtacctgatttctgctacactggtctattatacaaaatgaaatcttagtgatggtcgaaattgtaagaaacaccgtttgttctcttaaagctagtagagaaagttagacatcttttgcatcgatgctggccagttgcaatttaatttacagtactggcaataagtggtcctgttcctgaaagatgagggcagcattctctcaagagtattggcaaataaaaacagcatgtcttgctgtgttactgctctgaaactgattttcctcttatttgtttttaccaggtacatttcctgcaatccagatagtctagttgccaatgcgattgagctgtgtaccccatcatctgagaaacaggaaaagaacaaaggaaaccggggatggcgaaccatgagcagcgctggcctcgcgaggcagcgtacaaagtcgatgcccaactctgagccatttgttcccaagagagccatggctgttgatttgttcccccacacctcgcattgtgagatggttatgcttttcgagaggtgaacaagtagccggctcatcgaattctttctagagatttttgatctttgttgaaattttcatcatgttgtatgatgcattacaagacccagaagccatgacaattgattgttgctgctggcctggaacatcaatttttcatgttaaatgaattgcactcaaaaaggaccacaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0105000, RefSeq:Os04g0105000