Os04g0109900

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Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0109900| Description = Exostosin-like family protein| Version = NM_001058560.1 GI:115456849 GeneID:4334925| Length = 1583 bp| Definition =...")
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Gene Name

Os04g0109900

Description

Exostosin-like family protein

Version

NM_001058560.1 GI:115456849 GeneID:4334925

Length

1583 bp

Definition

Oryza sativa Japonica Group Os04g0109900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:576517..578099

Sequence Coding Region

576517..576618,576718..576899,576984..577350,577425..578099

Expression

GEO Profiles:Os04g0109900

Genome Context

<gbrowseImage1> name=NC_008397:576517..578099 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:576517..578099 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcccggaggagctccagcacgaagcttcgtggtcgtcgtcctcgccgtcatcgcgctctccgcaatcgtcgccgtggccggcacgaagaaggcgctgtccaccgtggacgtggaggaggagctcgacgcggcgcgcgccgcgatacgacgggcggcgcggcagcatcgccgcggcggaggcggagacgtcggctccgccaactggctgaggttctacggcggcgaggcggactacgacctcctctcgcgcgtctaccgcaacccggcggcgttctaccggagctacgtggagatggagaggcggttcaaggtgtacgtgtacgaggaaggcgagccgcccatcctgcacgagggcccgtgcaagaacatctacaccatcgagggcagcttcatcgagcagctcgagctcatgtcgccgtcggacgccggcggcggcgtccggacgtgggacccaacgcgcgcccacgccttcttcctgccgttcagcgtctcccagatggtcaagttcgtctaccgcccgccctcccaggaccgcgccccgctccgcgccatcgtcgccgactacgtccgcgtcgtcgccgcccgccaccccttctggaatcgctccgccggcgccgaccacttcatgctctcctgccatgattgggggccatacgcgtcgagggggcagccggagctgtacacgaacgccatccgcgcgctctgcaacgccaacacgtcggaggggttccggccggggaaggacgtgagcgtcccggagatcaacctctacgacggcgacatgccgcgggagctcctggcgccggcgccggggctggagtcccgcccgctcctcgccttcttcgccggcggccggcacgggcacgtccgcgacctcctgctccgccactggaagggacgggacgcggccacgttcccggtgtacgagtacgacctccccgccgccggcgactactactcgttcatgcggcgcgcgcgcttctgcctgtgcccgagcgggcacgaggtggcgagcccgcgggtggtggaggcgatccaggccgagtgcgtgcccgtggtcatcgccgacgggtacgcgctgccgttcgccgacgtgctgcggtgggaggcgttctcggtggcggtggcggtgggcgacatccccaggctgagggagaggctggagaggataccggcggcggaggtggagcggctccggcgaggggtgaggctggtgaagcgacacctgatgctgcagcagccgccgcggaggctggacatgttcaacatgatcctgcactctgtctggctcagggggctcaacttgagactccaccgttga</cdnaseq>

Protein Sequence

<aaseq>MAPGGAPARSFVVVVLAVIALSAIVAVAGTKKALSTVDVEEELD AARAAIRRAARQHRRGGGGDVGSANWLRFYGGEADYDLLSRVYRNPAAFYRSYVEMER RFKVYVYEEGEPPILHEGPCKNIYTIEGSFIEQLELMSPSDAGGGVRTWDPTRAHAFF LPFSVSQMVKFVYRPPSQDRAPLRAIVADYVRVVAARHPFWNRSAGADHFMLSCHDWG PYASRGQPELYTNAIRALCNANTSEGFRPGKDVSVPEINLYDGDMPRELLAPAPGLES RPLLAFFAGGRHGHVRDLLLRHWKGRDAATFPVYEYDLPAAGDYYSFMRRARFCLCPS GHEVASPRVVEAIQAECVPVVIADGYALPFADVLRWEAFSVAVAVGDIPRLRERLERI PAAEVERLRRGVRLVKRHLMLQQPPRRLDMFNMILHSVWLRGLNLRLHR</aaseq>

Gene Sequence

<dnaseqindica>1..102#202..383#468..834#909..1583#atggcgcccggaggagctccagcacgaagcttcgtggtcgtcgtcctcgccgtcatcgcgctctccgcaatcgtcgccgtggccggcacgaagaaggcgctggtgatgacaaccacacggccattccttctcgctcagagccagccctttaattaattatatttgtgctgagctatagctttctgctcttctctcttctagtccaccgtggacgtggaggaggagctcgacgcggcgcgcgccgcgatacgacgggcggcgcggcagcatcgccgcggcggaggcggagacgtcggctccgccaactggctgaggttctacggcggcgaggcggactacgacctcctctcgcgcgtctaccgcaacccggcggcgttctaccggtatgattattagctgacccatcgatccgtacgccgcgtcgtctccgtcgatcacgagcgtgcagtgcaccatggtggatgcaggagctacgtggagatggagaggcggttcaaggtgtacgtgtacgaggaaggcgagccgcccatcctgcacgagggcccgtgcaagaacatctacaccatcgagggcagcttcatcgagcagctcgagctcatgtcgccgtcggacgccggcggcggcgtccggacgtgggacccaacgcgcgcccacgccttcttcctgccgttcagcgtctcccagatggtcaagttcgtctaccgcccgccctcccaggaccgcgccccgctccgcgccatcgtcgccgactacgtccgcgtcgtcgccgcccgccaccccttctggaatcgctccgccggcgccgaccacttcatgctctcctgccatgattgggtaagtagaagcttagctacatgtgcagcaaggttttcgatggtttttgtgatgacacgtgttcggcggcgtaggggccatacgcgtcgagggggcagccggagctgtacacgaacgccatccgcgcgctctgcaacgccaacacgtcggaggggttccggccggggaaggacgtgagcgtcccggagatcaacctctacgacggcgacatgccgcgggagctcctggcgccggcgccggggctggagtcccgcccgctcctcgccttcttcgccggcggccggcacgggcacgtccgcgacctcctgctccgccactggaagggacgggacgcggccacgttcccggtgtacgagtacgacctccccgccgccggcgactactactcgttcatgcggcgcgcgcgcttctgcctgtgcccgagcgggcacgaggtggcgagcccgcgggtggtggaggcgatccaggccgagtgcgtgcccgtggtcatcgccgacgggtacgcgctgccgttcgccgacgtgctgcggtgggaggcgttctcggtggcggtggcggtgggcgacatccccaggctgagggagaggctggagaggataccggcggcggaggtggagcggctccggcgaggggtgaggctggtgaagcgacacctgatgctgcagcagccgccgcggaggctggacatgttcaacatgatcctgcactctgtctggctcagggggctcaacttgagactccaccgttga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0109900, RefSeq:Os04g0109900