Os04g0110100

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Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0110100| Description = Concanavalin A-like lectin/glucanase domain containing protein| Version = NM_001058561.1 GI:115456851 GeneID:4334926|...")
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Gene Name

Os04g0110100

Description

Concanavalin A-like lectin/glucanase domain containing protein

Version

NM_001058561.1 GI:115456851 GeneID:4334926

Length

1092 bp

Definition

Oryza sativa Japonica Group Os04g0110100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:583938..585029

Sequence Coding Region

584079..585017

Expression

GEO Profiles:Os04g0110100

Genome Context

<gbrowseImage1> name=NC_008397:583938..585029 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:583938..585029 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaatctctctataatctgtacaagatgatgctagtcgtcctagctcttctcggcgtcgcgacggcggcggcggcggcggccggcgacgttgtgtcgtacagctacccggccttcaacgcgacgacgacacgcgacgacagcctcgtcgccgccaccaacgcgtcaatcctcaccaccgcccgcctcctcttcgaccccgatttcccccacggcttcaacgtctccgagggcttcctgctcctctccggcgacatcgacgtctggcgcgacggcgtcggctccgccggggcgccggctcgcgaggcatccttcaacacgacgttcaccgtcgtcgccgccgcctctcccgtcgcgttcgtcgtcctcctcgacaggtatccaccgctccttgaccagagtggcctccgtgggagcaacgtctcatccgccgccgatggcgacgacggcaacgccacgaacagcctcgtcgccgtcgaggtcggcacggtgaagtcctacggcagagagtcccccgacgtcggcctcaacgtcaccgtcacgccaaaccgcactacggcgccgagcggcagcacggtgtggatccagtacgacgccgtcgagcaccgcctgtcggtgcacgtcgccgccgccggcgagccacggccatctaatgccctcctcgacgtgccgctatacctcgccggcgggcgcaccacccagaccgcgctcgtcggcttctttggcgggacgatcggggatatcatcgtcggcgtccgtggctgggagctgaccgtggagaggttgcgcggcgatgacggcggcggggggaagaagaggacgtcgtgggtggtgatactgctggcggtggtcgggtcggtggcgggcgtggcggccatggtgtccgtgctggtgtgtcgctttgtgcgcaagcgacgacacacggaacctaagcactag</cdnaseq>

Protein Sequence

<aaseq>MQSLYNLYKMMLVVLALLGVATAAAAAAGDVVSYSYPAFNATTT RDDSLVAATNASILTTARLLFDPDFPHGFNVSEGFLLLSGDIDVWRDGVGSAGAPARE ASFNTTFTVVAAASPVAFVVLLDRYPPLLDQSGLRGSNVSSAADGDDGNATNSLVAVE VGTVKSYGRESPDVGLNVTVTPNRTTAPSGSTVWIQYDAVEHRLSVHVAAAGEPRPSN ALLDVPLYLAGGRTTQTALVGFFGGTIGDIIVGVRGWELTVERLRGDDGGGGKKRTSW VVILLAVVGSVAGVAAMVSVLVCRFVRKRRHTEPKH</aaseq>

Gene Sequence

<dnaseqindica>13..951#catcacaagtaaatgcaatctctctataatctgtacaagatgatgctagtcgtcctagctcttctcggcgtcgcgacggcggcggcggcggcggccggcgacgttgtgtcgtacagctacccggccttcaacgcgacgacgacacgcgacgacagcctcgtcgccgccaccaacgcgtcaatcctcaccaccgcccgcctcctcttcgaccccgatttcccccacggcttcaacgtctccgagggcttcctgctcctctccggcgacatcgacgtctggcgcgacggcgtcggctccgccggggcgccggctcgcgaggcatccttcaacacgacgttcaccgtcgtcgccgccgcctctcccgtcgcgttcgtcgtcctcctcgacaggtatccaccgctccttgaccagagtggcctccgtgggagcaacgtctcatccgccgccgatggcgacgacggcaacgccacgaacagcctcgtcgccgtcgaggtcggcacggtgaagtcctacggcagagagtcccccgacgtcggcctcaacgtcaccgtcacgccaaaccgcactacggcgccgagcggcagcacggtgtggatccagtacgacgccgtcgagcaccgcctgtcggtgcacgtcgccgccgccggcgagccacggccatctaatgccctcctcgacgtgccgctatacctcgccggcgggcgcaccacccagaccgcgctcgtcggcttctttggcgggacgatcggggatatcatcgtcggcgtccgtggctgggagctgaccgtggagaggttgcgcggcgatgacggcggcggggggaagaagaggacgtcgtgggtggtgatactgctggcggtggtcgggtcggtggcgggcgtggcggccatggtgtccgtgctggtgtgtcgctttgtgcgcaagcgacgacacacggaacctaagcactagtatcatattcatataggactatgtataggtgtataagcttgtacgttaactagcttatttcgttttcaatatttcctcatctttctacggatttgttatatatagacttcctgcgacagaaaattggataaataactttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0110100, RefSeq:Os04g0110100