Os04g0111500

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Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0111500| Description = Exo70 exocyst complex subunit family protein| Version = NM_001058568.1 GI:115456865 GeneID:4334934| Length = 5678 bp...")
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Gene Name

Os04g0111500

Description

Exo70 exocyst complex subunit family protein

Version

NM_001058568.1 GI:115456865 GeneID:4334934

Length

5678 bp

Definition

Oryza sativa Japonica Group Os04g0111500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:652438..658115

Sequence Coding Region

652484..653680

Expression

GEO Profiles:Os04g0111500

Genome Context

<gbrowseImage1> name=NC_008397:652438..658115 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:652438..658115 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaagttttttacccacagtttctaacaagttcaatttttcctatttacagtctcttctatgaatatgatacaccatggattcttggtaaaaacacaaagacatccatggatttttcgaagtgtgaagatcttggaaaagattatcttattatgctgaaaattagcaccaaagttctccagtcgatgttctgtcagttttgtggacaaaatcaaccatttttccaaacaaaaaaagactactttcaacagtttgcaaagtcacctattaagaagatgttggagattgcactttctttcagtgagtcaaactggtctgaggagcatatccgtccaatgctacttgcctatgatacactacaagatgtccttcctaccataagggagttgtctcctgatgaacctgacgagttttttaccagcatcttacataacatgaggaatgcttccaggggaataattgacaatatgaagcgattcatacaacataaggtgcaaacctgggacaacattgctattcatccaacgacatgtttcctcataaatgcaataaagattttcaacgttcacaagaatttattgcattccactctggtccctggtgatggccaagactcatttggttatcttattaatggcgtcattgcttgctggaaattaaagatcaaagagctttccatgttagatgatccagacaaaaatgattcagacggaaacaatccaaacttgttcatattcttattgaataacataaagcattttaatagggatacaaatggtctgctggatgggttattggtccatagggagctcattgaagagtgcaagaatgagttccagagtgacatggaaaattatactagtagatatatgactgcatcttggggtccagccatatcttgtttgaacaatcatacaggcggaagcatacgtcaatctatgaatgcattcatttcaaagtttgaaggtacttttgattgccagaaggttttgaaagttcctgatagtgagctaaagcagaaattgcgagatgatatagaaaatttaatttttccagcatatgaaatatcctttgaggaactgcagagaaattccaattcaggattattttgctcatgttttccgagaaatttaacatgcagcatgtataccccagagatattacgacgttctgtgcaaggcttgtttgaaggatga</cdnaseq>

Protein Sequence

<aaseq>MQVFYPQFLTSSIFPIYSLFYEYDTPWILGKNTKTSMDFSKCED LGKDYLIMLKISTKVLQSMFCQFCGQNQPFFQTKKDYFQQFAKSPIKKMLEIALSFSE SNWSEEHIRPMLLAYDTLQDVLPTIRELSPDEPDEFFTSILHNMRNASRGIIDNMKRF IQHKVQTWDNIAIHPTTCFLINAIKIFNVHKNLLHSTLVPGDGQDSFGYLINGVIACW KLKIKELSMLDDPDKNDSDGNNPNLFIFLLNNIKHFNRDTNGLLDGLLVHRELIEECK NEFQSDMENYTSRYMTASWGPAISCLNNHTGGSIRQSMNAFISKFEGTFDCQKVLKVP DSELKQKLRDDIENLIFPAYEISFEELQRNSNSGLFCSCFPRNLTCSMYTPEILRRSV QGLFEG</aaseq>

Gene Sequence

<dnaseqindica>4436..5632#gcttatcccttataggcgccgcctcactccaccggcggccgccgccgcgaccctagagggggcgcctcgcttctgcttaccgaggtaaaggactgagctgccgtacacttgcaaccaatgtcgatttgatctgaaattggcacacggcttagctcatccttagttcttgttgggtttgtttccgttccgaaaaacgatgataaaaatcggtttcttgttgttgtttagggtgccaataaaaaccgaagggtttagtttccaactagatccgtggatctagtgtctcataatctcccaattttccctatattgtttctttttttttgagggggataagaagaagaagaagtaggaggcacactctcgttcatccccaccgattttgatattctagctccagtttctcacagcaaaatgctgatttggccacaggatcgttagggtggatgaaaggtagcccggattcttcatcgacgagagaggagcagaggattgctgcttggctgctactcgtttcctgcgtcctcctatggctatggccattcctgctgctgctgctgctgctctgtgggtgttgccatgccacagatagttgcgtcgctagattccttttgccctctaagttatcttccttaatactgtatggaacaggccgtttccatgcgacagaccggagaggtgatatgccgcctgcacatgtggaaccgggatggactgtcaacagctgccaacagtcactacgaatgcatcaaccgaccccccctttcgatccggacaaatctaacccacttctgctcctgcccatgcgactcatcagaaaggagcagtcctgacaattatgcatctagtgtagcaagtgactcaaatggtggtggcattggagcaaggaacgggcatccgcttcgttattcttcaaatgtccatcttctcgacgagaatgtcaacctcatctcaactgagtctgtggcacagcttgataccgctatgggccgttgcggagagatcataggtgatcacagagaagaactgctcatggtcttcactaacaattcagatatgttgagcaggtaattcacagccttttaattatccaacgtcaaacgtttctctgattccattaccccattacctgtcttttttggtcgcatacgccatgtttgaaccagccataattaacatggaaatttcctgtatggcattttttcccagcaccccaggaaaaggagcaactaaaaaaaaattctaatctgctcacatattatgtgttaataagccatatagttggcttgacgtgcagtgcaaaacacttctccattatatatgaaaaacaatccatatcattacaagtttgcaaccaacgcaccgttctagccaaggttgcagggtcaaacacagaaagaacaagggtccgtgtggttcatgggcaaaggttgtatgggagatggccatccatgttttgttggatggatccaactttccattaagagaatccaggacaccttaagtcttttggattgtggtgcattttagaattgttaaatatatgtaatggcaatacttttatgacattttaaatgagtaaatttcgcaaaagttcacatgttttgacaaaactagcagaaaactacatgttttaacttttaagtcacaatatcgcaaaattacaggcatagtgccaaaatattatcagtaaactagttgtttaagacgtaacactgattttctcaagaactattcaaaatttccgtcagggttagtggataacagagctaggtatggaacctgtagaatctgtagtttgtattttgtaatgaatccagtgccaaatccgtagctttgcaatttttatgcttaaatctgtagcttttgacaaattctctaggtatgtagttaatgcaacattgcaggccaaatctgaagttattgtctttttgatagttttgttaaagtattttactttttctaaattactcttatgatatcaacatagcacaattaaccattataatctttttgattgaacataaagaaacattgactaacattaaattttgaattgtccaccttatttttcgaagtcacttctagaaaatcactctaatcgttccactcttgggaatcctttgatgttcatttcatcttgtgacagttctaaattgaccaggtgtagtttggtgcatgatgtagctccacttcattataacaggcacctgtccggattcatagtagtcacatcccgtactagattaacttattttaggatggagagagtaagtctgaagcaagaaatagatctctatttcaattgccaatcctcatttcttaagtttccattctttaccctgttcatctatcccaatcctcactagtcagtcatcacccttctctgccatcgacaagaaatgacagccccagcacttaacctaccttgtcactcacttttctgttgctcatacagacacattcttggaaatcagcgtacaactatctgctttgggattgtctccaaacaatgacaagtgacaaataaggttctcacatgacatatggcctgatgaatgtgagcagagtcaggattcagtattgttttattaagtagagctaggactatgtgtaattttttttttaactagagtcgcgctcctcccatttcattaagagaaatcacagcattcagactacatgagttcaaacgaaaacaaaaaaaacgaagactatctagacccctttctccctttcttctgcgccatggtgtcatcccaccatggataagaaaatgggggcagataacaacgacctggtgaaacggccatgggccaataaatatttcatccaagttttgagcatcagtgaaaccaaaaggaacctttcttatcagacagggacaactgcagagaaaaaagactccccagacaaggactatgtgtaattaggagtggaaaagaaaaagctcatgtagctggctcgtttgggtcatttcaaaactgctctgattgatctactctaattttttaaataaaaaactattcaatttttaacgaaagttgttttcactttggcttgacttggcttggctcgttagctcgttgacaaaaaaataatccctaacgatagagaaaaatataataaataacaaaaacttaatttcgaagaaagctcgataaaaagctgaacaagcttttttcccacccctattagtaacaactttattgccagaggagatataggagttgatgcagtagaagcatatggagagatgtactcgtttcacagcattgtcaaacttctgtacatatattgtttgtgttggtgtatctttgttttgtttttctgagctagcttgtggataaatctataggtattggccaggttgaaaagggattgaggatagcatcaaatacctgattgtcaacttgtgaagagcactgataaagaatagtagatttccagtttcctccatcccattttgcctgttcccttagcttttcctatctgccttttcttattctttagttcttacccaaaattctcatctttttcctgccttttatttctgtgaaagaattcccctggtttccgctgaaaataaggtcatcagaatgtttgtgatccctaggggcctagggtgtcgatcagcgtgggttggaggtgctcggtggtgtagtagtggatatttgtatgttgcttgaattgtggaggtgttagtcaacctagattgttggaaatgttggctctaataccttaaatgataaaaccaacatcagtaaacgaaataaccaatagaatgtattgatgtgattgaataggggacaaatgtatgaagtatgtgggaactcttttctggatccaaaactgatatggtactaaactttagactcttaaaacagactccctgttcttttcagattgttcgccagattattgaaatggattgtttgctccacgctttgaaaactacattttctcaaaaaactttcttcaactgcattacttagatcacttattttaagctgtttgttaactttatttttaattgtcactataatcaagtagataatccacggcaataatcttctttataatctaaatcaaatagggcctcaatgctaaatcttaattattactgcatacagaagtaatctatgttgtttcctaaattttagatataccgtgtgtaatttcttccatgatgcaaatctatggctacctagtcaagctaaaaaactacatagtagttgagtaattaaattgaatggtatcctgaatgcttaccaaaccatccaatttctagttgcatggcttaagtatataattattttttctttctatttcatttccagttgcaatcatgggacagcttcttgttatgctaaaatcccaggatatgagtaatccaatttgtctttgcttataacaatgctttttttttctaaatatgcaagttttttacccacagtttctaacaagttcaatttttcctatttacagtctcttctatgaatatgatacaccatggattcttggtaaaaacacaaagacatccatggatttttcgaagtgtgaagatcttggaaaagattatcttattatgctgaaaattagcaccaaagttctccagtcgatgttctgtcagttttgtggacaaaatcaaccatttttccaaacaaaaaaagactactttcaacagtttgcaaagtcacctattaagaagatgttggagattgcactttctttcagtgagtcaaactggtctgaggagcatatccgtccaatgctacttgcctatgatacactacaagatgtccttcctaccataagggagttgtctcctgatgaacctgacgagttttttaccagcatcttacataacatgaggaatgcttccaggggaataattgacaatatgaagcgattcatacaacataaggtgcaaacctgggacaacattgctattcatccaacgacatgtttcctcataaatgcaataaagattttcaacgttcacaagaatttattgcattccactctggtccctggtgatggccaagactcatttggttatcttattaatggcgtcattgcttgctggaaattaaagatcaaagagctttccatgttagatgatccagacaaaaatgattcagacggaaacaatccaaacttgttcatattcttattgaataacataaagcattttaatagggatacaaatggtctgctggatgggttattggtccatagggagctcattgaagagtgcaagaatgagttccagagtgacatggaaaattatactagtagatatatgactgcatcttggggtccagccatatcttgtttgaacaatcatacaggcggaagcatacgtcaatctatgaatgcattcatttcaaagtttgaaggtacttttgattgccagaaggttttgaaagttcctgatagtgagctaaagcagaaattgcgagatgatatagaaaatttaatttttccagcatatgaaatatcctttgaggaactgcagagaaattccaattcaggattattttgctcatgttttccgagaaatttaacatgcagcatgtataccccagagatattacgacgttctgtgcaaggcttgtttgaaggatgaactctatttctcctccctctctatatatagttccaacaaatgtacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0111500, RefSeq:Os04g0111500