Os04g0111900

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Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0111900| Description = Similar to Resistance gene analog PIC22 (Fragment)| Version = NM_001058569.1 GI:115456867 GeneID:4334935| Length = 6...")
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Gene Name

Os04g0111900

Description

Similar to Resistance gene analog PIC22 (Fragment)

Version

NM_001058569.1 GI:115456867 GeneID:4334935

Length

6571 bp

Definition

Oryza sativa Japonica Group Os04g0111900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:671690..678260

Sequence Coding Region

674866..678165

Expression

GEO Profiles:Os04g0111900

Genome Context

<gbrowseImage1> name=NC_008397:671690..678260 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:671690..678260 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctctcccctcgcgtcggtgggcaggggcggtggaatccggcgtggatccggtggcggaggcttgggcgaagctgctgcggtcgctttcccaggccatggcgcggctgagggtgcagatggagtcgttcgacgatgcccagatgaggtgggcgctggccgccggtgtccgagccaaggcgcagctgctggctagccgcctggctcagatcctcgccctcttctgggacgaggggcagcgcgcggcgctcccggcctgcgtgcgggatgccctgtacggcatggaagacatggtcgacgatttggagtaccacatgctcaagttccagcctcatcaacaagaggtcagatgcaatctgctcatctctcttgtcaatctccgctaccggctcatcatcagccacgcgtctcgctcccgcttcctcaaggatttggatttcgttgcgagcgaggcaggcagcctcctctccgcgatgcataagctcgagcccaccgctccgtcgctccctgccctgctgcttgctgacgacgatcatcaggttgtgtttgggcgccacaaggaggtcactgacattgttcgaatactcattgatccgccggcaagccaccaccaccaccctacttacgacatcctcccaatcgttggcatggggggcgtggggaagaccacactcgccaagttagtctatgatgatgccaaggttaagcagcatttcgagctcaggctctgggcgagtgtctctactagtggagggtttcacaaaattgacatcaccgaacaaatcttgcgttcagccaacccaacataccctgcttctattcacagtgaacctacgcttgacatgcttcagttccatctcagccaactggtagcgtccaagagattcttgcttgttctcgatgacatcagggaggagtccttcaccagcatggcctgccaagagatcctcagtcctctatcatcggcagaaaaggggagcagaattctggtgactactacaacagcctcagtgcctgccatgctgggggcatcttgtacataccacctgaatgtattggacatcgaggatttgtggtccttgctcaagaaatatgctttccatggaggcccaactcatgattccacccaggagcttgaagaaattgggaggaacatcgcatccaagctcaaaggattgccattggctgccaagatgcttggggggctgcttggagctacaaagagcacaaagacctggatgaatgtcttggacaaagaactttatggcgatagtattcttcccgtactagaattgagttacagttacctgcctcgacgactcaagcagtgcttttcgttctgcagtttgtttccgaggaactataaatttaacaaaagagtgttgatccaactttggatggcccaaggttttgttcagtcacagaacagtgctgacaaaaatatggaggacctggcagaagattattttgaggaacttctttcgcgatccttctttgatgtacgcagggaagcgtgtgaaacacactacgtgatgcatgaccttgtccatgacctcgcgcagtctgtttcggcagatcaatgccttcgtgttgagcatggcatgatttctgagaagccatcaactgctcgctatgtatctgtcacccaagatggactacaaggccttgggagcttctgcaaacctgaaaatttgcgtaccttgatagttctaagatcatttatattctcctcaagttgcttccaagatgaattcttcaggaagataaggaacttgcgtgtcttagaccttagttgctctaactttgtacagttgcctaactcgattggtgaactagtgcacctgcgttacctatctctccctcgcaccctcaatatgcttcctgagtcagtcagcaagctactgcacctcgaatcattgtgctttcacaagtgttcccttgaaaagcttcccgcaggcataactatgctggtcaacttgcggcaccttaacattgccacaaggttcattgcacaggtgtccggcattgggcggcttgtaaaccttcagggatcagttgaattccatgttaaaaagggggtaggatgtaccttggaagagctgaagggcttaaaagatctccgtgggaaactaaaaataaagggccttgataatgttttaagcaaagaagcagccagcaaagccgagttgtacaagaaacgacatcttagggagctcagtctggaatggaactctgcaagtagaaatctagtccttgatgcagatgctataatattagaaaacctacagccaccctctagcttagaagtactcaatatcaataggtaccaaggtgccatatgccctagttggctgcagttatcatcacttaagcagcttcaatccttggaccttattaactgcaggaatttggagatcctacctccattgggactattaccgtcactcaaatatctatgtatgaaggaactgtgcactgttaatcaaattggacatgagttctacggcgatgatgatgtaccatttccatccctgataatgcttgttttcgatgattttccaagtttatttgattggtctggtgaagtgaaaggcaatccgtttccccatctccaaaagctaacacttatagactgtccaaatttggttcaggttcctccattgcccccttctgtcagtgatgttacaatggagcgtacagcattgatatcctatttgaggcttgccagattgtcttcgccaaggtcagatatgctcacgcttgatgttcgtaatattagtatactttgctggggactgttccatcagttacatttggaatctgtcatatctttaaaaatagaaggtcgtgagacaccttttgccaccaaaggattgtgttcgtttacttctcttcaaaggcttcagttatgtcaatttgacttaacagacaatacgttaagtggaactctctacgcgcttccttcgctatgctccttggagatgatcgatctgcccaatataacatccctttcagttccatcagacattgatttcttcccgaaacttgctgaattgtacatatgcaactgtctgttgtttgcttcccttgattccttgcacattttcatttccctaaagcgattggtgatcgagagatgccccaaactgacagcaggatccttcccagcaaactttaagaacctcacatctctcaaggtactaagcatatcacactgcaaggatttccaatcttttcctgtgggtagtgtaccaccgtcactggaagcacttcatctcgttggttgccaccaaagttaa</cdnaseq>

Protein Sequence

<aaseq>MALPSRRWAGAVESGVDPVAEAWAKLLRSLSQAMARLRVQMESF DDAQMRWALAAGVRAKAQLLASRLAQILALFWDEGQRAALPACVRDALYGMEDMVDDL EYHMLKFQPHQQEVRCNLLISLVNLRYRLIISHASRSRFLKDLDFVASEAGSLLSAMH KLEPTAPSLPALLLADDDHQVVFGRHKEVTDIVRILIDPPASHHHHPTYDILPIVGMG GVGKTTLAKLVYDDAKVKQHFELRLWASVSTSGGFHKIDITEQILRSANPTYPASIHS EPTLDMLQFHLSQLVASKRFLLVLDDIREESFTSMACQEILSPLSSAEKGSRILVTTT TASVPAMLGASCTYHLNVLDIEDLWSLLKKYAFHGGPTHDSTQELEEIGRNIASKLKG LPLAAKMLGGLLGATKSTKTWMNVLDKELYGDSILPVLELSYSYLPRRLKQCFSFCSL FPRNYKFNKRVLIQLWMAQGFVQSQNSADKNMEDLAEDYFEELLSRSFFDVRREACET HYVMHDLVHDLAQSVSADQCLRVEHGMISEKPSTARYVSVTQDGLQGLGSFCKPENLR TLIVLRSFIFSSSCFQDEFFRKIRNLRVLDLSCSNFVQLPNSIGELVHLRYLSLPRTL NMLPESVSKLLHLESLCFHKCSLEKLPAGITMLVNLRHLNIATRFIAQVSGIGRLVNL QGSVEFHVKKGVGCTLEELKGLKDLRGKLKIKGLDNVLSKEAASKAELYKKRHLRELS LEWNSASRNLVLDADAIILENLQPPSSLEVLNINRYQGAICPSWLQLSSLKQLQSLDL INCRNLEILPPLGLLPSLKYLCMKELCTVNQIGHEFYGDDDVPFPSLIMLVFDDFPSL FDWSGEVKGNPFPHLQKLTLIDCPNLVQVPPLPPSVSDVTMERTALISYLRLARLSSP RSDMLTLDVRNISILCWGLFHQLHLESVISLKIEGRETPFATKGLCSFTSLQRLQLCQ FDLTDNTLSGTLYALPSLCSLEMIDLPNITSLSVPSDIDFFPKLAELYICNCLLFASL DSLHIFISLKRLVIERCPKLTAGSFPANFKNLTSLKVLSISHCKDFQSFPVGSVPPSL EALHLVGCHQS</aaseq>

Gene Sequence

<dnaseqindica>96..3395#ggggaaagttgttgcgcacagcacacattctctttctgaaacgctcgaaatcccccaaaaattggcccccctcgctcgtagtccggcgtccggcgatggctctcccctcgcgtcggtgggcaggggcggtggaatccggcgtggatccggtggcggaggcttgggcgaagctgctgcggtcgctttcccaggccatggcgcggctgagggtgcagatggagtcgttcgacgatgcccagatgaggtgggcgctggccgccggtgtccgagccaaggcgcagctgctggctagccgcctggctcagatcctcgccctcttctgggacgaggggcagcgcgcggcgctcccggcctgcgtgcgggatgccctgtacggcatggaagacatggtcgacgatttggagtaccacatgctcaagttccagcctcatcaacaagaggtcagatgcaatctgctcatctctcttgtcaatctccgctaccggctcatcatcagccacgcgtctcgctcccgcttcctcaaggatttggatttcgttgcgagcgaggcaggcagcctcctctccgcgatgcataagctcgagcccaccgctccgtcgctccctgccctgctgcttgctgacgacgatcatcaggttgtgtttgggcgccacaaggaggtcactgacattgttcgaatactcattgatccgccggcaagccaccaccaccaccctacttacgacatcctcccaatcgttggcatggggggcgtggggaagaccacactcgccaagttagtctatgatgatgccaaggttaagcagcatttcgagctcaggctctgggcgagtgtctctactagtggagggtttcacaaaattgacatcaccgaacaaatcttgcgttcagccaacccaacataccctgcttctattcacagtgaacctacgcttgacatgcttcagttccatctcagccaactggtagcgtccaagagattcttgcttgttctcgatgacatcagggaggagtccttcaccagcatggcctgccaagagatcctcagtcctctatcatcggcagaaaaggggagcagaattctggtgactactacaacagcctcagtgcctgccatgctgggggcatcttgtacataccacctgaatgtattggacatcgaggatttgtggtccttgctcaagaaatatgctttccatggaggcccaactcatgattccacccaggagcttgaagaaattgggaggaacatcgcatccaagctcaaaggattgccattggctgccaagatgcttggggggctgcttggagctacaaagagcacaaagacctggatgaatgtcttggacaaagaactttatggcgatagtattcttcccgtactagaattgagttacagttacctgcctcgacgactcaagcagtgcttttcgttctgcagtttgtttccgaggaactataaatttaacaaaagagtgttgatccaactttggatggcccaaggttttgttcagtcacagaacagtgctgacaaaaatatggaggacctggcagaagattattttgaggaacttctttcgcgatccttctttgatgtacgcagggaagcgtgtgaaacacactacgtgatgcatgaccttgtccatgacctcgcgcagtctgtttcggcagatcaatgccttcgtgttgagcatggcatgatttctgagaagccatcaactgctcgctatgtatctgtcacccaagatggactacaaggccttgggagcttctgcaaacctgaaaatttgcgtaccttgatagttctaagatcatttatattctcctcaagttgcttccaagatgaattcttcaggaagataaggaacttgcgtgtcttagaccttagttgctctaactttgtacagttgcctaactcgattggtgaactagtgcacctgcgttacctatctctccctcgcaccctcaatatgcttcctgagtcagtcagcaagctactgcacctcgaatcattgtgctttcacaagtgttcccttgaaaagcttcccgcaggcataactatgctggtcaacttgcggcaccttaacattgccacaaggttcattgcacaggtgtccggcattgggcggcttgtaaaccttcagggatcagttgaattccatgttaaaaagggggtaggatgtaccttggaagagctgaagggcttaaaagatctccgtgggaaactaaaaataaagggccttgataatgttttaagcaaagaagcagccagcaaagccgagttgtacaagaaacgacatcttagggagctcagtctggaatggaactctgcaagtagaaatctagtccttgatgcagatgctataatattagaaaacctacagccaccctctagcttagaagtactcaatatcaataggtaccaaggtgccatatgccctagttggctgcagttatcatcacttaagcagcttcaatccttggaccttattaactgcaggaatttggagatcctacctccattgggactattaccgtcactcaaatatctatgtatgaaggaactgtgcactgttaatcaaattggacatgagttctacggcgatgatgatgtaccatttccatccctgataatgcttgttttcgatgattttccaagtttatttgattggtctggtgaagtgaaaggcaatccgtttccccatctccaaaagctaacacttatagactgtccaaatttggttcaggttcctccattgcccccttctgtcagtgatgttacaatggagcgtacagcattgatatcctatttgaggcttgccagattgtcttcgccaaggtcagatatgctcacgcttgatgttcgtaatattagtatactttgctggggactgttccatcagttacatttggaatctgtcatatctttaaaaatagaaggtcgtgagacaccttttgccaccaaaggattgtgttcgtttacttctcttcaaaggcttcagttatgtcaatttgacttaacagacaatacgttaagtggaactctctacgcgcttccttcgctatgctccttggagatgatcgatctgcccaatataacatccctttcagttccatcagacattgatttcttcccgaaacttgctgaattgtacatatgcaactgtctgttgtttgcttcccttgattccttgcacattttcatttccctaaagcgattggtgatcgagagatgccccaaactgacagcaggatccttcccagcaaactttaagaacctcacatctctcaaggtactaagcatatcacactgcaaggatttccaatcttttcctgtgggtagtgtaccaccgtcactggaagcacttcatctcgttggttgccaccaaagttaactgacaatgtggtgtcaagaaaaatgctccttaacacaccaaagctcactgatggaccatgaaggtaaagctgctgctgattgcttacttgtcctctaattgttatgtagctgtgaaatgtatgccttcaaataatcatgcattttatttcgttgacaattcaggaatcaggaaatgttcctcgactcttcgaacacagaaatatgcattttcactagtgatgatatgaaatgtttcccaagttgtatctgcctaatagatgataatcaagccaaccactagcttgatggacttgtaacataggctctataaaatggtttcactagttgataaattttactcaaatccatggctttcattagatatggccgcatattcgttgtttatggattaggaatcagatatgtgtatactagtcatagaggtgtaccttctacaaatttgatgaaaaactctcaacccctataaagggttatacacaagtttgaactgtacattaagttcttttagtggttgctaagattgttcgcagctctctagttccgggaaaaaaattgctcaatggctatatagccatgagctaaccagtttctttatccttgatactgctatatccaaatatgtgattggaaaatttgttggtggccacagccacatttgtgaagtttatgtgatatacacttctaaactactaaatatagagtatgcaccataatagcattagaatgcatgtaccaaaacaaaatttacgataaatttcatgagtaccaaatagcatgcatataggtcgatgggcacttaaaatgcattcataatttcgtatgcagcattttgtatcgcacatcggtttgcaccttaaccaggtgctcccttgaaattctctttgcttcagattgtgatctagcatttgaataattaggatcaacagattattagctatttgttttgttctttagcgttggatgtataaaaaactgctcagagttttgataaatacacaatagttgcttaaccagtaaagtgacatggtaatctgcatacttattacaaatgaggaaacaccccctgcgtccatcgcaacaaacatatggtacagattgggagagggtaacaacaaaaaggaaatcatgtggatacaagataaaatcccaaacatgaactgcatttctgcaaacatcagtcaccaccttaggtttgaagcagaatataaaacgtgtctaaaacaaacagtcagagacctggaacaaagtattgccctgcaactcccttgcatttgtcttgatgctgttttgtgccgcagagatctcattgctagccatatattttgtttaggtgcagctaagtgtcatactcttgcaggcttataggagagcattgtgatgctttgaactcatgaagtgctatttctgaattctgatctaacgtatttgtttgatttctgcagaacataaacaaaaaaaaatcttgacaacggatagcaggttacacaaataatgttgcatggagaaatcaagtgacggctcgcaagtagtaggagaggacgagcggtagtgcatatgacgtcgaccttgccaagtaacttcaggctcatcccttggagacatgagagatgagcgaccatacaatacaaggccaatgtattctgatctgtttaggatctcttcatcacctcgtctctttatatttctttgttaagccagggttggacggccatctccttgctaggctgaagaaacaatggaacacatcctagtctctgtttttagccttcagaattgaaagttgatcctatagaggttaggcttctcttccatctccccaactcttgacacaaacaacttctccagttgctggtctagggctttgaagggcacaagaaagtaggataagaaaggatttaactcgcttaatttgttttggaaatctagaagcaatgggagcgattgcatgtttaatggtgcaaatcctagtgtgctggctgtaattcaaggcgccttatggtgcttggctggtgcttctgagctccgtgggggtgctcgaatctcgataggtcgttagcccgtatggtttaaggggtagtttatttttgaattttttttaaagggaagtctatatgggatttggatgatattttaggcttcaatcatgcagattttaaatccaattggatgctctttcaccaagtagatcgaaaatgtttcaccaagtagatcgaaaatgttttaatcttttaaaaaactgaaacacaatcaaatcatcttatgaaacattttgctataacatatgtaacaacggttctcaatatactaaaacatgaatgatttagctatcaaaaatcattcaaatcattcgacagctatttaaccttccataggatgggggattttctaattccccatccatttgtatctctctcttgcttaatgaaatatgtgtagatcacctacgtgttcaagaaaatgatgcaaaggaaagggccgttagttcagatataggcaaattattatgcttgtgcttgattccaaatactctgtccgtttcaaaattatattcttgtcctttcttgtttttggtgccttaacttcatctttatttttattagaaaataacatcctctaagagcaaggataataatagagcccacttcctactattagctcattttaaagccaacatatataatagattagctataagattggctacaattttcttctcatctctctatctctcagttatacatttaatgcatttgtcttagagcttgtgataagctagctgagagccaacatccttaatttttcactacatctctccgccacctaaggttataataggcttatagctcactattatacttgctctaagtaggagataaagggcatcgatacggtgtcaaaaggtacgcatgtacatgcctttggaatttaggtgggcagcaccggacgcgattgcgtggaaatctaatagcctacgacggtggaccggtcggtttaaatgatagttgatggtcagattttttttttagaatttcgaggatttctctgattttagaaggtatcatgtgatggtgtacgagtgttttttaggaaatgtactgaacttttagtttataatagtattgtcgaaacgacaaccgcatacgtcgaaagacgtggttactcaacagtggttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0111900, RefSeq:Os04g0111900