Os09g0562600

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0562600| Description = EGF domain containing protein| Version = NM_001070470.1 GI:115480682 GeneID:4347859| Length = 2753 bp| Definition =...")
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Gene Name

Os09g0562600

Description

EGF domain containing protein

Version

NM_001070470.1 GI:115480682 GeneID:4347859

Length

2753 bp

Definition

Oryza sativa Japonica Group Os09g0562600, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23180379..23183131

Sequence Coding Region

23180409..23181444,23181522..23181680,23181789..23183002

Expression

GEO Profiles:Os09g0562600

Genome Context

<gbrowseImage1> name=NC_008402:23180379..23183131 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23180379..23183131 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaaggcaggcaggaggattcatttccatggcgtggtcaatgccaccgctggctttgttcgccgccgtgctggcgctgcagcaagctatcgccgccgccgcggcggccggagactgcccgaccacctgcggcgacgtggccgtgccgttcccgttcggcatcggcgccggctgctaccacttgcccgggttcaacctcacctgcgaccggagcagcgacccgccgcggctgctcctcggcgacgccgccgcgttccaggtgctcaacgtctccatcgtcaacgccacggtgcgcgccgcccgcgtcggcggcataaacatcacctacggcggcgggaacacgtcgtcggccgacgagggacgcggcgcttggcgggggctcggcgacggcgggccgttcgcgctgtccgaggatcgcaacgagctcgtcgtcgtctgggggtgcgacgtcgtggcgctgctcaccgacggcggggggagcggcaacagcagcaacgtcaccatcagcggctgcgcctccttctgccccggcaccgacgccggcggccaagcgatcgccgccccagcgggttccacgatgtcgctgaccgaggacaggcggtgcaccggcgtcggctgctgccagatgcccatcagcgtcggccgcgactcctaccaagtgcgtctccgccggctcaacccgagcccgccccagccgccgccgccgcagggcgccggcgacccgacggtggtgctcatcgcggagcaagggtgggtcgccgaggcctctaggtccacccgaggctacccgctcccggtcaccttcgacgagacggcggtgcccgtgttgctggggtggatgatcgcgtcgacccgcgtcggcgccgacggcgaggtgccggtgaactcgacgtgccccgccgacgccgcgcgcagcgcctgcaagagcagccacagctcgtgccgcaacgtctccagctccgcgcgcgccggctacgtctgcgactgcgacgccggcttccatggcaacccctacctcgccaccggatgccaagacatcaacgagtgcgagcgtgcagaggagcacggttgcttcggcgagtgcatcaacacggccggatcgttcctgtgccggtgccctgcaggaatgcaaggcaactacacccaacgcaatggatgtttcagacctcctcttcctgctcgttcttctacaggtttaagcatcggtgtgggtgtcagtagtgctgcaagccttatacttatagtgatcatggcgatcttcatcatccgcaagcagaaacgcaggagggccaagaagattaggcagaagtacttcaagcagaatcgtgggcagctactgcagcaactggtagctcagagggctgacattgcagagaggatgatcataccgttgggtgagctcaagaaggcaacaaacaactttgatagagctcgtgagctcggcggcggcggccatggcaccgtgtacaaggggatcttgtccgatctccatgtcgtcgccatcaagaaatcaaagattgcagttcaaagggagatcgatgagttcataaacgaggttgccattctctcgcagataaaccataggaacgtggtgaagcttttcggatgttgcctcgagacagaagtgccattgcttgtctatgagttcgtttccaatggaaccctttacagccatctccatgtcagtggaccaagatcactaccatggagtgacagattgaggattgcaactgagacagccaaagctattgcctatctgcactcatcagtttcaatcccaataatccacagagatatcaagtccactaatatactcctcgatgacactctgacctccaaggtgtcagactttggagcttcaagatgtatcccggttgatcaaacaggggtaacaacaaaggttcagggaaccttaggatacatggatccggcatactattacactcagaggcttacagaaaagagcgacgtgtacagcttcggggtcattcttgtagagcttctcacaaggaagaagccattttctcacctgacacctgagggtgaaggtctggttgcacattttgtcacttcatttacagaaggcaatctagttggagtgttagacctgcaaatcatggaggaggcagacatgaaagttgtcgaagtagtagctacgctagctgtgacatgtgtaaatctgagaggagaggaccggcctaccatgagacaggttgagatggcacttgaaggcattcaggcatccagggaaaatgtttcaggtaatctttctgcagagaagcttggagagagcaataatgtcgcgagggatttcatgccaagccaagaaggaagaagcatgacagaagggactaggcaatatagtttggaagaagagttcttgttgtcttcaaggtaccctcggtag</cdnaseq>

Protein Sequence

<aaseq>MQRQAGGFISMAWSMPPLALFAAVLALQQAIAAAAAAGDCPTTC GDVAVPFPFGIGAGCYHLPGFNLTCDRSSDPPRLLLGDAAAFQVLNVSIVNATVRAAR VGGINITYGGGNTSSADEGRGAWRGLGDGGPFALSEDRNELVVVWGCDVVALLTDGGG SGNSSNVTISGCASFCPGTDAGGQAIAAPAGSTMSLTEDRRCTGVGCCQMPISVGRDS YQVRLRRLNPSPPQPPPPQGAGDPTVVLIAEQGWVAEASRSTRGYPLPVTFDETAVPV LLGWMIASTRVGADGEVPVNSTCPADAARSACKSSHSSCRNVSSSARAGYVCDCDAGF HGNPYLATGCQDINECERAEEHGCFGECINTAGSFLCRCPAGMQGNYTQRNGCFRPPL PARSSTGLSIGVGVSSAASLILIVIMAIFIIRKQKRRRAKKIRQKYFKQNRGQLLQQL VAQRADIAERMIIPLGELKKATNNFDRARELGGGGHGTVYKGILSDLHVVAIKKSKIA VQREIDEFINEVAILSQINHRNVVKLFGCCLETEVPLLVYEFVSNGTLYSHLHVSGPR SLPWSDRLRIATETAKAIAYLHSSVSIPIIHRDIKSTNILLDDTLTSKVSDFGASRCI PVDQTGVTTKVQGTLGYMDPAYYYTQRLTEKSDVYSFGVILVELLTRKKPFSHLTPEG EGLVAHFVTSFTEGNLVGVLDLQIMEEADMKVVEVVATLAVTCVNLRGEDRPTMRQVE MALEGIQASRENVSGNLSAEKLGESNNVARDFMPSQEGRSMTEGTRQYSLEEEFLLSS RYPR</aaseq>

Gene Sequence

<dnaseqindica>31..1066#1144..1302#1411..2624#agtcggccatgctgccttgatgatcgatcgatgcaaaggcaggcaggaggattcatttccatggcgtggtcaatgccaccgctggctttgttcgccgccgtgctggcgctgcagcaagctatcgccgccgccgcggcggccggagactgcccgaccacctgcggcgacgtggccgtgccgttcccgttcggcatcggcgccggctgctaccacttgcccgggttcaacctcacctgcgaccggagcagcgacccgccgcggctgctcctcggcgacgccgccgcgttccaggtgctcaacgtctccatcgtcaacgccacggtgcgcgccgcccgcgtcggcggcataaacatcacctacggcggcgggaacacgtcgtcggccgacgagggacgcggcgcttggcgggggctcggcgacggcgggccgttcgcgctgtccgaggatcgcaacgagctcgtcgtcgtctgggggtgcgacgtcgtggcgctgctcaccgacggcggggggagcggcaacagcagcaacgtcaccatcagcggctgcgcctccttctgccccggcaccgacgccggcggccaagcgatcgccgccccagcgggttccacgatgtcgctgaccgaggacaggcggtgcaccggcgtcggctgctgccagatgcccatcagcgtcggccgcgactcctaccaagtgcgtctccgccggctcaacccgagcccgccccagccgccgccgccgcagggcgccggcgacccgacggtggtgctcatcgcggagcaagggtgggtcgccgaggcctctaggtccacccgaggctacccgctcccggtcaccttcgacgagacggcggtgcccgtgttgctggggtggatgatcgcgtcgacccgcgtcggcgccgacggcgaggtgccggtgaactcgacgtgccccgccgacgccgcgcgcagcgcctgcaagagcagccacagctcgtgccgcaacgtctccagctccgcgcgcgccggctacgtctgcgactgcgacgccggcttccatggcaacccctacctcgccaccggatgccaaggtaaaattacatacagaattcgattctttttcttgtgaattcgagctaatttgtgtcgatttgggcgatttgcgaagacatcaacgagtgcgagcgtgcagaggagcacggttgcttcggcgagtgcatcaacacggccggatcgttcctgtgccggtgccctgcaggaatgcaaggcaactacacccaacgcaatggatgtttcagacctcctcttcctgctcgttcttctacaggtgagcaatcacacattcacacaatacttaatcacagctgcaacttgattggtgaaagaaaagtttacagtaatactatctctgctcttacattcttgtcatcttcaggtttaagcatcggtgtgggtgtcagtagtgctgcaagccttatacttatagtgatcatggcgatcttcatcatccgcaagcagaaacgcaggagggccaagaagattaggcagaagtacttcaagcagaatcgtgggcagctactgcagcaactggtagctcagagggctgacattgcagagaggatgatcataccgttgggtgagctcaagaaggcaacaaacaactttgatagagctcgtgagctcggcggcggcggccatggcaccgtgtacaaggggatcttgtccgatctccatgtcgtcgccatcaagaaatcaaagattgcagttcaaagggagatcgatgagttcataaacgaggttgccattctctcgcagataaaccataggaacgtggtgaagcttttcggatgttgcctcgagacagaagtgccattgcttgtctatgagttcgtttccaatggaaccctttacagccatctccatgtcagtggaccaagatcactaccatggagtgacagattgaggattgcaactgagacagccaaagctattgcctatctgcactcatcagtttcaatcccaataatccacagagatatcaagtccactaatatactcctcgatgacactctgacctccaaggtgtcagactttggagcttcaagatgtatcccggttgatcaaacaggggtaacaacaaaggttcagggaaccttaggatacatggatccggcatactattacactcagaggcttacagaaaagagcgacgtgtacagcttcggggtcattcttgtagagcttctcacaaggaagaagccattttctcacctgacacctgagggtgaaggtctggttgcacattttgtcacttcatttacagaaggcaatctagttggagtgttagacctgcaaatcatggaggaggcagacatgaaagttgtcgaagtagtagctacgctagctgtgacatgtgtaaatctgagaggagaggaccggcctaccatgagacaggttgagatggcacttgaaggcattcaggcatccagggaaaatgtttcaggtaatctttctgcagagaagcttggagagagcaataatgtcgcgagggatttcatgccaagccaagaaggaagaagcatgacagaagggactaggcaatatagtttggaagaagagttcttgttgtcttcaaggtaccctcggtagttttctggtcatctgtgttcatgtaaagctgatttcagtttcatttttccccaaggagtttatgtgttctttaaagaattgaaaattaccctcattcgagttaaaaacaatgggccatgacatgcttct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0562600, RefSeq:Os09g0562600

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os09g0562600&oldid=1521"