Os09g0562700

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0562700| Description = Similar to Pre-pro-TPE4A protein precursor| Version = NM_001070471.1 GI:115480684 GeneID:4347860| Length = 1900 bp| ...")
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Gene Name

Os09g0562700

Description

Similar to Pre-pro-TPE4A protein precursor

Version

NM_001070471.1 GI:115480684 GeneID:4347860

Length

1900 bp

Definition

Oryza sativa Japonica Group Os09g0562700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23183288..23185187

Sequence Coding Region

23183484..23184100,23184607..23184640,23185131..23185187

Expression

GEO Profiles:Os09g0562700

Genome Context

<gbrowseImage1> name=NC_008402:23183288..23185187 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23183288..23185187 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cacgctcgtctcctcctcttcctcacgagctgcctcctgccagtcgatcatggcggcgccgtgacggaggtgaaggaccaagggcgatgtggatcgtgctgggcgttctcgacggtggcggtggtggaggggatacagaagatcaagaaggggaagctggtgtcactgtcggagcaggagctggtcgactgcgacacgctcgacagcggctgcgacggcggcgtcagctaccgggcgctggagtggatcaccgccaacggcggcatcaccacccgcgacgactacccctacacggccgccgcctccgccgcctgcgaccgcgccaagctgggccaccacgccgccaccatcgccgggctccgccgcgtggccacccggagcgaggcgtcgctggcgaacgccgcggcggcgcagcccgtggccgtgtccatcgaggccggcggcgacaacttccagcactacaggaagggcgtgtacgacgggccgtgcgggacgcggctcaaccacggcgtcaccgtcgtcggctacggccaggaggaggcggcggcggacggcggcgccgccggcggcgacaagtactggatcatcaagaactcgtgggggaagaactggggcgaccagggatacatcaagatgaagaaggacgtcgccggcaagccggaggggctctgcggcatcgccatccggccgtcattcccgctcatgtga</cdnaseq>

Protein Sequence

<aaseq>HARLLLFLTSCLLPVDHGGAVTEVKDQGRCGSCWAFSTVAVVEG IQKIKKGKLVSLSEQELVDCDTLDSGCDGGVSYRALEWITANGGITTRDDYPYTAAAS AACDRAKLGHHAATIAGLRRVATRSEASLANAAAAQPVAVSIEAGGDNFQHYRKGVYD GPCGTRLNHGVTVVGYGQEEAAADGGAAGGDKYWIIKNSWGKNWGDQGYIKMKKDVAG KPEGLCGIAIRPSFPLM</aaseq>

Gene Sequence

<dnaseqindica>1088..1704#548..581#1..57#cacgctcgtctcctcctcttcctcacgagctgcctcctgccagtcgatcatggcggccgcatccttctgttccaaacgatctctcccatgcctactgctcatattagccgtcttcttcctcggttgctcgtcgccggcgacggcccgccgcgtcaccgagggcgaaccggcgacgacgacgacgatggtggagaggttccggcggtggaaggcggagtacaaccggtcgtacgccacggcgggggaggagcgccgccggctccgggtgtacgcgcgcaacgtgcggtacatcgaggcgacgaacgcggcggcggggctcgcgtacgagctcggcgagacggcctacaccgacctcaccaacgacgagttcatcgccatgtacaccgcgccgccgccgctgcggtcgtcagacggcgacgacgacgacgcggcgacgacgatcatcaccacgcgcgccgggccggtggacgaacacaacctgcagccggaggtgtacttcaacgagtccgccggcgcgccggcgagcgttgactggcgggcgagcggcgccgtgacggaggtgaaggaccaagggcgatgtggtacgcactactccagctagctaacacgtcaacctctcaattatttcattttttagataataataaactctcaattatttgtgacctctctgtaaacacatggctcgctactaaccacatgtgccccctgtctctttcattatgcgacccaaatgcataataataatactccctttctctctgtttttcaataaagtttaattttcgtttaattcgaatctagcatataaaaatgaaaaatataagtcatattaaaattacttctaataataaaataagtaacgtgaaataaataatacttacatgattttttaataagatgaatatgatttcatatttaaaagttaacagcatcatatatattgtattactaactattcgtatccttcgcctgcgtttgcaccatgtttgtaaagaaactatttcatttcttattagtaatattattattctactgtgtttagtgaagtaattaattagctatattactgtgtctgtattaaaaggatcgtgctgggcgttctcgacggtggcggtggtggaggggatacagaagatcaagaaggggaagctggtgtcactgtcggagcaggagctggtcgactgcgacacgctcgacagcggctgcgacggcggcgtcagctaccgggcgctggagtggatcaccgccaacggcggcatcaccacccgcgacgactacccctacacggccgccgcctccgccgcctgcgaccgcgccaagctgggccaccacgccgccaccatcgccgggctccgccgcgtggccacccggagcgaggcgtcgctggcgaacgccgcggcggcgcagcccgtggccgtgtccatcgaggccggcggcgacaacttccagcactacaggaagggcgtgtacgacgggccgtgcgggacgcggctcaaccacggcgtcaccgtcgtcggctacggccaggaggaggcggcggcggacggcggcgccgccggcggcgacaagtactggatcatcaagaactcgtgggggaagaactggggcgaccagggatacatcaagatgaagaaggacgtcgccggcaagccggaggggctctgcggcatcgccatccggccgtcattcccgctcatgtgatctctacatttttctaagttagtagctttcaaattagtcaaacttaggaaatttgggatggtgttcatcgcgtgcacgatgcacctacacacactacgctgttaatattacgtgtaaaactcgcgaatcacatgattgtttattacaattggaaataaatttatatacaaaggatagaaatttcttcagtggactt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0562700, RefSeq:Os09g0562700