Os04g0116600

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Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0116600| Description = Glucose/ribitol dehydrogenase family protein| Version = NM_001058582.1 GI:115456893 GeneID:4334949| Length = 2527 bp...")
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Gene Name

Os04g0116600

Description

Glucose/ribitol dehydrogenase family protein

Version

NM_001058582.1 GI:115456893 GeneID:4334949

Length

2527 bp

Definition

Oryza sativa Japonica Group Os04g0116600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:971675..974201

Sequence Coding Region

971727..972361,973078..973402

Expression

GEO Profiles:Os04g0116600

Genome Context

<gbrowseImage1> name=NC_008397:971675..974201 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:971675..974201 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctacgggggcggcgccgctctggttcacctcgctggccggcctcggcgccgcctacctcaccgtcgtcttcctccgcctcctcccttacctcgccctctacctccgccggcccaaggacctccgccgctgctacggcgagtgggccgtggtcaccggcccgacgacggggctcgggcgatccatggccatggagctcgcccgccgcggcttcaacctcgtcctcctcgacctcgatcgggataacctccgcgaggtgtcggaggcgattcgcgaggcccacgccggcgcggtggccaccaggacggtggtgttcgacctgtcgaccgtcggcaccggcgccggcgaggaggggatgcggcggctgagggaggcggtggacggggtggaggtcgggatgctggtgaacaacgccgccgtggcgaggcccggggcgctctactttcacgaggccgacgtggagcggctggtggcgatgatacgggtgaacgccatggcgctgacggcggtgaccgccgccgtgctgccggcgatggcgaggcgcggccggggagccatcgtcaacgtcggctccggctccaccgtcgccgtcccgtcttttcccttgtacactgtctacagctccaccaaacggtacgtggagcagctgtcgaagagcctgtacgtggagtacaaagggaaggggatcgacgtgcagctgcaggtgcccttctacgtccacacaaacatgctctccgccgccatcaaggacaggatgctgctgccggcgttcgtggcgacggccgacgactacacgcgggcggcggcgcggtgggtggggcacggccacatcgccgtccccgacgccggccagcagctgcagtggttcctcgccgccttcgtgccggacttcgcccacgactggtatcgcctccgcaagcacctgcagcaccgggccatcctctggaacctcatttaa</cdnaseq>

Protein Sequence

<aaseq>MATGAAPLWFTSLAGLGAAYLTVVFLRLLPYLALYLRRPKDLRR CYGEWAVVTGPTTGLGRSMAMELARRGFNLVLLDLDRDNLREVSEAIREAHAGAVATR TVVFDLSTVGTGAGEEGMRRLREAVDGVEVGMLVNNAAVARPGALYFHEADVERLVAM IRVNAMALTAVTAAVLPAMARRGRGAIVNVGSGSTVAVPSFPLYTVYSSTKRYVEQLS KSLYVEYKGKGIDVQLQVPFYVHTNMLSAAIKDRMLLPAFVATADDYTRAAARWVGHG HIAVPDAGQQLQWFLAAFVPDFAHDWYRLRKHLQHRAILWNLI</aaseq>

Gene Sequence

<dnaseqindica>53..687#1404..1728#gaatgtacattagcccaggcgcccagcagcaagctgtacctagcaagcgacaatggctacgggggcggcgccgctctggttcacctcgctggccggcctcggcgccgcctacctcaccgtcgtcttcctccgcctcctcccttacctcgccctctacctccgccggcccaaggacctccgccgctgctacggcgagtgggccgtggtcaccggcccgacgacggggctcgggcgatccatggccatggagctcgcccgccgcggcttcaacctcgtcctcctcgacctcgatcgggataacctccgcgaggtgtcggaggcgattcgcgaggcccacgccggcgcggtggccaccaggacggtggtgttcgacctgtcgaccgtcggcaccggcgccggcgaggaggggatgcggcggctgagggaggcggtggacggggtggaggtcgggatgctggtgaacaacgccgccgtggcgaggcccggggcgctctactttcacgaggccgacgtggagcggctggtggcgatgatacgggtgaacgccatggcgctgacggcggtgaccgccgccgtgctgccggcgatggcgaggcgcggccggggagccatcgtcaacgtcggctccggctccaccgtcgccgtcccgtcttttcccttgtacactgtctacagctccaccaaacggtacaaatgcgatacgctacgcatgcgagcgttcaatatttcggaactaaatttctgaaatttcaggaatctcggaacacaaaaccagcccgaaaactatttctccagaatttttttttaaatctagcaaaagttgttcaaatttagtcacagattatcattctttttctcgggccgaaatagtctgaagtttctttgaagccccaaaaataaaatgtgcaaatcgatatatatagaaccatgtggtatgcatgcatccaacaaaatatatacatttatgtagcttcagtcaaccgaccaaatagcaaaagcaatatagaaaaagtatttccatcactggagagggcatccccatcccctctatttttttataggctacctaaatagtttataatttataaatattttttataaaaattgaaagataaatatattacttcataaactgcaagttcaaatttaattattttttttataatttctagaaattaaatttgaccatgcattttttagttttttttgaagtgatatatattttctcttgtctattctttttcaaaaaatgataatggggacgttcactcgagagataaaaatccatctcggcaatatataccactactgcactagcatatgagttgattaactccctgcaaaatcttgccctgaatttttctagaaaatgggtaaacttgccctgaatggattaatgacaggtacgtggagcagctgtcgaagagcctgtacgtggagtacaaagggaaggggatcgacgtgcagctgcaggtgcccttctacgtccacacaaacatgctctccgccgccatcaaggacaggatgctgctgccggcgttcgtggcgacggccgacgactacacgcgggcggcggcgcggtgggtggggcacggccacatcgccgtccccgacgccggccagcagctgcagtggttcctcgccgccttcgtgccggacttcgcccacgactggtatcgcctccgcaagcacctgcagcaccgggccatcctctggaacctcatttaatttcatccatattttggccctgtttggatatagggaagtttagtctgtcacattaaatatttgggcactaatcttgagcattaaatatacactaattacaagactaattacacagatggaggctaatttgcaaaatggatctattaaccctaattagtccataatttaacaatgtagtgctacactaaataagtgctaatcatagattaattaggcataatagattcgtctcgccaagtagcctctatctgtgtaattagttttgtaagtagtctgtgtttaatacttcaaattaatgtttaaatatctaatgtgacagtgacgagctaaagtttaatcactagatccaaacaagcccttaactggcagaaaatttttttttacctcaaatctcttgaacaatccaccagtcaatcaagcaatatatatgcatttttattttctttttgcatatatagttgttgcatatatgttaatggtttagtgtggcgatgaagtttgtgagtgtgttactccaccaactaaggtttaaataatgatccctgatgtatatataaaatatggttctgtacatgtgtccttttaattattgatatgtacttcctctgtttcacaatgtaagtcattctagtatttccaacatttatattaatgttaatgaatctagatagatatatatatgtctagatttattaacattaatataaatgtggaaaatgatagaatgacttacattgtgaaacgggggagaacgtgttatccttccaagttatccttccaatactacttgtccttgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0116600, RefSeq:Os04g0116600