Os04g0118100

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Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0118100| Description = Similar to Chloroplast Toc64-2| Version = NM_001058591.1 GI:115456911 GeneID:4334958| Length = 3025 bp| Definition ...")
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Gene Name

Os04g0118100

Description

Similar to Chloroplast Toc64-2

Version

NM_001058591.1 GI:115456911 GeneID:4334958

Length

3025 bp

Definition

Oryza sativa Japonica Group Os04g0118100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1060543..1063567

Sequence Coding Region

1060573..1060691,1060786..1060938,1061512..1061762,1061993..1062175,1062282..1062429
,1062713..1062884,1063005..1063139,1063244..1063390

Expression

GEO Profiles:Os04g0118100

Genome Context

<gbrowseImage1> name=NC_008397:1060543..1063567 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1060543..1063567 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggcgggtggaggacgaggagactacggcgccttcatggagaggttcgtgctgccgccgccgccatcgcagcaactccctctccacggcctcaccttcgccatcaaggacatcttcgacatcgccggccgcgtcaccgggttcggcaacccggactgggcgaggacccacgcgcccgccgccgccacctcccccgtcgtcctcgccgcgctcgccgccggcgccaccagcctcggcaccaccatcatggacgagatggcctacagcatcaatggggagaacacgcactacggcacgccgaccaacccttgcgcgcctgggagagtccccggaggatcctccagtggttcagctgtcgccgtcgccgccaacctcgtcgacttctccctcggcaccgacaccggcggcagcgtcagggtgcctgctgcctactgcggcatctttggactccgcccttcccatgggttggtttctgcagagaatgtcatccccatggcgcaaatgtttgatactgttgggtggttttccagagatttatctacgttgtctcgtgtaaccaaagtgctgttgccactccctgatgacattgtcaagcaacctactcaagtcacaattcctatggactgtttccagatcttaggctctctcgacgaccgcacctatcaaatcatcaatgcttcggtagcaaagagatttgatagtcagatattagacaataggaaccttggagatttcatctctgataatgttccaagcataggaaagttcatcactgacttctctgaaagcgaactcccttctgtgccagctctatccgtcatttcacatgtcatgcgaggccttcaaaggtctcagttcaaagcaaaccatgcagagtgggtcaacactgtaaaacctaacctaggccctggattacgggagagaatactggaggccattgcatctggggataatgaatccctggaggatttccaagctataagggctgaattcaagtctgcacttgctgctcttctgaaggatcatggaatccttgcaatccctacagttcctgggcctccacccaaggtgggcatggaagctgctcctctggaaaatttccgagcaagagcattttcacttctctccatcgctggattatccgggttttgccaggtgagtattccgctgggcatgcgcaatggtcttcctgtgtcagtttcgctcgtggcgcgacatggtgcagaccatttcctcctcaatgtggttgaggagctgtatcagacactcatagacgaagccactaaaacttggtcctcctga</cdnaseq>

Protein Sequence

<aaseq>MAMAGGGRGDYGAFMERFVLPPPPSQQLPLHGLTFAIKDIFDIA GRVTGFGNPDWARTHAPAAATSPVVLAALAAGATSLGTTIMDEMAYSINGENTHYGTP TNPCAPGRVPGGSSSGSAVAVAANLVDFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVS AENVIPMAQMFDTVGWFSRDLSTLSRVTKVLLPLPDDIVKQPTQVTIPMDCFQILGSL DDRTYQIINASVAKRFDSQILDNRNLGDFISDNVPSIGKFITDFSESELPSVPALSVI SHVMRGLQRSQFKANHAEWVNTVKPNLGPGLRERILEAIASGDNESLEDFQAIRAEFK SALAALLKDHGILAIPTVPGPPPKVGMEAAPLENFRARAFSLLSIAGLSGFCQVSIPL GMRNGLPVSVSLVARHGADHFLLNVVEELYQTLIDEATKTWSS</aaseq>

Gene Sequence

<dnaseqindica>31..149#244..396#970..1220#1451..1633#1740..1887#2171..2342#2463..2597#2702..2848#agagagagacagagagagctcgagctcgacatggcgatggcgggtggaggacgaggagactacggcgccttcatggagaggttcgtgctgccgccgccgccatcgcagcaactccctctccacggcctcaccttcgccatcaaggacatgtacggattgctcgctcgctcgctgccttcttcttcttcctttctcccccaaatgaacgacgaatactcactgtcttgtttggttaattcgcagcttcgacatcgccggccgcgtcaccgggttcggcaacccggactgggcgaggacccacgcgcccgccgccgccacctcccccgtcgtcctcgccgcgctcgccgccggcgccaccagcctcggcaccaccatcatggacgagatggcctacaggtacccactgcgacccccatgctctttttcagaatactccttcttaaacacaagccacagaaagaacaaactttgatttttagaggcacttttaatttccaaatcttcttggaaggataagctaagtcttgcatttttaatgccctgtagaaggatttgacagtaaagcacccatctttggtcagcttccagattaatttatctttcagattattcagtacaatcgactgaactttctgttgaaagtttatctccatgctaaagcaagttgtcacccataacaattctcctgaactttgtttctaaaaaaaaagaagaagaattctcctaaacttaaatccaatttcacccctcttttgtcactttggcaactgtaacatgcttggtgaaggtactgttataaatgaaaggatattgctcagctaatggtttcctaccaagccaactatccccccaaaataaatttgttttccccatttccaataattttgtcacaaaatttgtaaaaggttggttgtcacaaaatttgtgggtcttaactcttatgagctaggattggtttgttgttgtcagcatcaatggggagaacacgcactacggcacgccgaccaacccttgcgcgcctgggagagtccccggaggatcctccagtggttcagctgtcgccgtcgccgccaacctcgtcgacttctccctcggcaccgacaccggcggcagcgtcagggtgcctgctgcctactgcggcatctttggactccgcccttcccatgggttggtttctgcagagaatgtcatccccatggcgcaaatgtttgatactgttggtaattattcacttactatctcctccatttcccttttagtattgattactactgcataggtattgtttctgttcaaattacacccttaatgttactgcataatgttggtcaaattacttcagcacagttacaatcaggtgaaaacaaagacctgttaatcagtattaattactactgcgagtggtgctgattgatgagtttctggtttattcatgcaattgcttgtgcagggtggttttccagagatttatctacgttgtctcgtgtaaccaaagtgctgttgccactccctgatgacattgtcaagcaacctactcaagtcacaattcctatggactgtttccagatcttaggctctctcgacgaccgcacctatcaaatcatcaatgcttcggtagcaaagagatttgatagtgagtagtactatctacgcactcatgttgttctagcttagagctctagaattcttgctttctaccatacatcttgtctgatggggttgttcctttgttttcacaggtcagatattagacaataggaaccttggagatttcatctctgataatgttccaagcataggaaagttcatcactgacttctctgaaagcgaactcccttctgtgccagctctatccgtcatttcacatgtcatgcgaggccttcaaaggtttcacctacagctagcttattcaggatatctagtaatattgctttaaggtttgagttaatagtgctagctactgactactgcacaccatgccaaatagtttagtatattcttttagtacaccaatcatcttgttcataatcgtggtagaaaaatccaataattttcagcagcatctagtgataggatttgtgctcgttcactagccagagttgcatatgtaggacaaggagtctgggagataaaactgtaaattaatccattaaaactatgtgtacttcaggtctcagttcaaagcaaaccatgcagagtgggtcaacactgtaaaacctaacctaggccctggattacgggagagaatactggaggccattgcatctggggataatgaatccctggaggatttccaagctataagggctgaattcaagtctgcacttgctgctcttctgaaggtaactgaaagaatgatttcctcctgcattcttctgcagccaataattttctggtgatttgtgtcaattatcagataagtagtttccagctctcttagccacttgcttgtttattcataggatcatggaatccttgcaatccctacagttcctgggcctccacccaaggtgggcatggaagctgctcctctggaaaatttccgagcaagagcattttcacttctctccatcgctggattatccgggttttgccaggtagaactagctagcaagttaatctatcttttcttattaattctaccttgacaatggttggggtgactaatgtttttttgatgtgttctgcctatgtgctgcaggtgagtattccgctgggcatgcgcaatggtcttcctgtgtcagtttcgctcgtggcgcgacatggtgcagaccatttcctcctcaatgtggttgaggagctgtatcagacactcatagacgaagccactaaaacttggtcctcctgaatcctgccctatttcatctgtatatgcctaatacacagtcaaaacacatttcatatggaaatggagtgatactgatacagatactacagtagactgcccatgtaattaacatttgcatatgcatggatgtttgcactgcacagacaaagttctttgggataaaacttgtgctttacc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0118100, RefSeq:Os04g0118100