Os04g0118500

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Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0118500| Description = Similar to Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (Rotamase Pin1) (PPIase Pin1) (MdPin1)| Version = NM_00...")
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Gene Name

Os04g0118500

Description

Similar to Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (Rotamase Pin1) (PPIase Pin1) (MdPin1)

Version

NM_001186812.1 GI:297722754 GeneID:9266162

Length

2068 bp

Definition

Oryza sativa Japonica Group Os04g0118500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1087359..1089426

Sequence Coding Region

1087612..1087737,1089093..1089287

Expression

GEO Profiles:Os04g0118500

Genome Context

<gbrowseImage1> name=NC_008397:1087359..1089426 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1087359..1089426 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcaagcacgagggctcccgccgcaaggcctcctggaaggatcccgacggccgcgtcatctccgctaccacgcgcgccgacgccgccgcgcgcctcgccgacctccgcgaccagatcctctccggccgcgccaacttcgccgacctcgccgcccgccactccgactgctcctccgcgcgccgtggcggcgacctggggcacttttgggaggaggcagatgcagaaacccttcgaagatgcgacatttgctctcaaggttggtgagatgagtgacactgtggacactgacagtggtgttcacatcatcctgcgcactgcttaa</cdnaseq>

Protein Sequence

<aaseq>SSTRAPAARPPGRIPTAASSPLPRAPTPPRASPTSATRSSPAAP TSPTSPPATPTAPPRAVAATWGTFGRRQMQKPFEDATFALKVGEMSDTVDTDSGVHII LRTA</aaseq>

Gene Sequence

<dnaseqindica>1690..1815#140..334#actccatgtggtttgcacaaacggactcgaaaagcgtattcgcagaaagcgtattggtgaggcggaggagtagaggaggagatcgagatggcgtcgtcggcgacggagacggagacggtgagggcgttgcacatcctgatcaagcacgagggctcccgccgcaaggcctcctggaaggatcccgacggccgcgtcatctccgctaccacgcgcgccgacgccgccgcgcgcctcgccgacctccgcgaccagatcctctccggccgcgccaacttcgccgacctcgccgcccgccactccgactgctcctccgcgcgccgtggcggcgacctgggtgcgtcccccgatctgatctctctctctctcagatccacttcttggcccatccattcgtttcttgcggacttagttggtgtagccaaatcaaggagatctttcaacctttcttctgtgagtgagacgcgattctttcatcttgccacttcaatcaacttttgcgctataattgcaacccttaatccatacaggagttatgtgtaagtttgtaatagtaacagtaactactcaaacaagaattatcgatcgatagagctatatgctcgggagttcctggagctcctaggaggaggtaggtcacatctatcatctatggattgttgcctaactgtttgtacaaggatcagttagcttgttcacatctatcatctactcatttttgtcacagtgtgaaatgaggcatttaatgaaattctaattttaactcgtgtataacattcacagatgtcatgacatgagtaggacatccaataatttgcttggtctgatggcatagtttgctggtctgtttatcatgaaagatcaccagcctcccactggatctgtgttgttagtgtctgcaacctactagtggacgtagtgtctgcgcgatacaagatttgctattttgtcaacgaatttgtgcactactggggctaactttgcaggtagaactatagcctttcaagaataattaaccaggctaaattaagccaaatgaaatgagctggttcagctgtaagagcatacaagtcagatgaatagcttatgctgaaaactagagtattaattcccaaatgggtgttactgttgattcccttcattcgatcattgatggtcagctcctctgataaaatgttttttgtagttaattactgcaccatttttttttctcttccttttgtgtttcccaattgtttggttgcacgcgttatatcagtgtaacaagcacttctgcagtcattccattatgttgtgatatccatcttttattgtgcaagtttattctgttaagacttgtttgtagccacattacacgtcttccatcagcctatggcattgtcttcattattccttagcatcggcatgccgagtagggagtgtcacatgtctgtttcaagtagaaatatttaatcgagaattctttaagagaatttacctaagcacccatattcttctctgtgtgtgcgcatctttaagtatagctttaagggaataactttgcaatctttgtgttgcattacggccacttatgttttatgtgcttcttgggcactgttatctttacagataatgcataatgattttctggtatgggttctatctttgccagtactataggtcttttctaaccgtggcgtaaccctccttgcaggcacttttgggaggaggcagatgcagaaacccttcgaagatgcgacatttgctctcaaggttggtgagatgagtgacactgtggacactgacagtggtgttcacatcatcctgcgcactgcttaagatgctgatatcgatcgtcagctggttggcttccaaatgttattttctggtagcctaaaacttcaaatcaaaatgaaccctgtaacgaatatgatatgttccgcgacccgcttttgtttcgacatttgagcacatggtatggcatgtttccgtgatgaacattttaatctcctattgctccgttttctagcgattgttcatttgttttcaatatttggaaaccctatcaatatatgaatggacacatgggtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0118500, RefSeq:Os04g0118500