Os04g0118700

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Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0118700| Description = Protein prenyltransferase domain containing protein| Version = NM_001058594.2 GI:297602076 GeneID:4334962| Length = ...")
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Gene Name

Os04g0118700

Description

Protein prenyltransferase domain containing protein

Version

NM_001058594.2 GI:297602076 GeneID:4334962

Length

2571 bp

Definition

Oryza sativa Japonica Group Os04g0118700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1097856..1100426

Sequence Coding Region

1097856..1100426

Expression

GEO Profiles:Os04g0118700

Genome Context

<gbrowseImage1> name=NC_008397:1097856..1100426 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1097856..1100426 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggccgccgccgccgcaacttcgccgccgccgccgccgccgccaccgcccacgcacccacctcccacctcggcgacagtccgctccctgaccgccgcgggcaaccacgccgccgccctccgcgcgctctcctccatcaccatggcgtcgccgcagcagcagctcgaccactcggcgctcccgcccgccatcaagtccgccgcggccctccgcgacgcccgctccgcccgcgccatccacgccgccgcgctccgccgcggcctgctccaccgcccctccccggccgtcgccaacgcgctgctcaccgcctacgcgcgctgcggccgcctcgccgccgcgctcgaggtgttcggctccatctccgactccgcgcatgacgccgtctccttcaactccctcatctccgcgctctgcctcttccgccgctgggaccacgcgctcgccgcgctccgcgccatgctcgccggcggccacccgctcacttccttcacgctcgtcagcgtcctccgcgccgtctcccacctccccgccgccgccgccgccgttcgcctcggccgcgaggcgcacgccttcgcgctcaagaacggcctcctccatggccaccagcgcttcgccttcaacgcgctcctctccatgtacgcccgcctcggcctcgtcgccgacgcgcagaggctcttcgccggcgccacgcccggccgcggcgacgtcgtcacgtggaacaccatggtcagcgtgctcgtgcagagcgggatgttcgacgaggccgtccagacgctctacgacatggtggcgctcggcgtgcggcccgacggcgtcacgttcgcgagcgcgctcccggcgtgctcgcggctagagctgctcgacgtcggccgggagatgcacgcctacgtcatcaaggacgacgagctcgccgccaactcgttcgtggcgagcgcgctggtggacatgtacgccacgcacgagcaggtggggaaggcgaggcaggtgttcgacatggtgcccgactccgggaagcagctcgggatgtggaacgccatgatctgcggctacgcgcaggccggcatggacgaggaggcgcttcgtctgttcgcgcggatggaggcagaggccggcttcgtgccctgcgagaccaccatggccagcgtgctgccggcgtgcgcgcgctccgaggcgttcgccggcaaggaggccgtgcacgggtacgtggtgaagcgcggcatggcgggcaaccggttcgtgcagaacgcgctcatggacatgtacgcgcgcctcggcaagacggacgtcgcccgccggatcttcgccatggtcgacctccctgacgtcgtctcctggaacaccctcatcaccggctgcgtcgtccagggccacgtcgccgacgcgttccagctcgcccgcgagatgcagcagctagaagaaggcggcgtggtgccgaacgccatcaccctgatgaccctcctgccggggtgcgccatcctggcggcgccggcgagggggaaggagatccacgggtacgcggtgaggcacgcgctggacacggacgtggccgtcgggagcgcgctggtggacatgtacgccaagtgcgggtgcctggcgctgtcgagggcggtgttcgaccggctgccgcggcggaacaccatcacctggaacgtcctcatcatggcgtacggcatgcacgggctcggcggcgaggccacggtgctgttcgaccggatgacggcgagcggcgaggcgaggcccaacgaggtgaccttcatggcggccctggcggcgtgcagccactccggcatggtggaccgtgggctgcagctgttccacgccatggagcgcgaccacggcgtcgagccgacgccggacatcctcgcctgcgtcgtggacatcctggggcgcgccggcaggctggacgaggcgtacgccatggtgacctcgatggagaccggcgagcagcaggtgtcggcgtggagcacgatgctcggcgcgtgccggctccaccgcaacgtccacctcggcgagatcgccggcgagcggctgctggagctggagccggaggaggcgagccactatgtgctcctctgcaacatctactccgcggccgggcagtggactcgggcggcggaggtgaggagcaggatgcggcggcgaggcgtggcgaaggagcccgggtgcagctggatcgaggtcgacggcgcgatccaccggttcatggccggcgagtcggcgcacccggcgagcgaggaggtgcacgcgcacatggaggcgctctggggggagatggtggcgcgcgggtacacgccggacacgtcgtgcgtgctccacgacatggacgacggcgacaaggcggccgtgctccggtgccacagcgagaagctcgccatcgcgttcgggctgctcagggcggcgccgggcgccaccattagggtggccaagaacctgagggtgtgcaacgactgccatgaggcggccaagttcttgtcaaagatggtcgggagggagatcgtgctcagggatgtcagaaggtttcaccatttccgcaacggccaatgctcctgtggggattactggtag</cdnaseq>

Protein Sequence

<aaseq>MAMAAAAATSPPPPPPPPPTHPPPTSATVRSLTAAGNHAAALRA LSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANAL LTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGH PLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTF ASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM VPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSE AFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTL ITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYA VRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGE ATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILA CVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLEL EPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGE SAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGL LRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW </aaseq>

Gene Sequence

<dnaseqindica>1..2571#atggccatggccgccgccgccgcaacttcgccgccgccgccgccgccgccaccgcccacgcacccacctcccacctcggcgacagtccgctccctgaccgccgcgggcaaccacgccgccgccctccgcgcgctctcctccatcaccatggcgtcgccgcagcagcagctcgaccactcggcgctcccgcccgccatcaagtccgccgcggccctccgcgacgcccgctccgcccgcgccatccacgccgccgcgctccgccgcggcctgctccaccgcccctccccggccgtcgccaacgcgctgctcaccgcctacgcgcgctgcggccgcctcgccgccgcgctcgaggtgttcggctccatctccgactccgcgcatgacgccgtctccttcaactccctcatctccgcgctctgcctcttccgccgctgggaccacgcgctcgccgcgctccgcgccatgctcgccggcggccacccgctcacttccttcacgctcgtcagcgtcctccgcgccgtctcccacctccccgccgccgccgccgccgttcgcctcggccgcgaggcgcacgccttcgcgctcaagaacggcctcctccatggccaccagcgcttcgccttcaacgcgctcctctccatgtacgcccgcctcggcctcgtcgccgacgcgcagaggctcttcgccggcgccacgcccggccgcggcgacgtcgtcacgtggaacaccatggtcagcgtgctcgtgcagagcgggatgttcgacgaggccgtccagacgctctacgacatggtggcgctcggcgtgcggcccgacggcgtcacgttcgcgagcgcgctcccggcgtgctcgcggctagagctgctcgacgtcggccgggagatgcacgcctacgtcatcaaggacgacgagctcgccgccaactcgttcgtggcgagcgcgctggtggacatgtacgccacgcacgagcaggtggggaaggcgaggcaggtgttcgacatggtgcccgactccgggaagcagctcgggatgtggaacgccatgatctgcggctacgcgcaggccggcatggacgaggaggcgcttcgtctgttcgcgcggatggaggcagaggccggcttcgtgccctgcgagaccaccatggccagcgtgctgccggcgtgcgcgcgctccgaggcgttcgccggcaaggaggccgtgcacgggtacgtggtgaagcgcggcatggcgggcaaccggttcgtgcagaacgcgctcatggacatgtacgcgcgcctcggcaagacggacgtcgcccgccggatcttcgccatggtcgacctccctgacgtcgtctcctggaacaccctcatcaccggctgcgtcgtccagggccacgtcgccgacgcgttccagctcgcccgcgagatgcagcagctagaagaaggcggcgtggtgccgaacgccatcaccctgatgaccctcctgccggggtgcgccatcctggcggcgccggcgagggggaaggagatccacgggtacgcggtgaggcacgcgctggacacggacgtggccgtcgggagcgcgctggtggacatgtacgccaagtgcgggtgcctggcgctgtcgagggcggtgttcgaccggctgccgcggcggaacaccatcacctggaacgtcctcatcatggcgtacggcatgcacgggctcggcggcgaggccacggtgctgttcgaccggatgacggcgagcggcgaggcgaggcccaacgaggtgaccttcatggcggccctggcggcgtgcagccactccggcatggtggaccgtgggctgcagctgttccacgccatggagcgcgaccacggcgtcgagccgacgccggacatcctcgcctgcgtcgtggacatcctggggcgcgccggcaggctggacgaggcgtacgccatggtgacctcgatggagaccggcgagcagcaggtgtcggcgtggagcacgatgctcggcgcgtgccggctccaccgcaacgtccacctcggcgagatcgccggcgagcggctgctggagctggagccggaggaggcgagccactatgtgctcctctgcaacatctactccgcggccgggcagtggactcgggcggcggaggtgaggagcaggatgcggcggcgaggcgtggcgaaggagcccgggtgcagctggatcgaggtcgacggcgcgatccaccggttcatggccggcgagtcggcgcacccggcgagcgaggaggtgcacgcgcacatggaggcgctctggggggagatggtggcgcgcgggtacacgccggacacgtcgtgcgtgctccacgacatggacgacggcgacaaggcggccgtgctccggtgccacagcgagaagctcgccatcgcgttcgggctgctcagggcggcgccgggcgccaccattagggtggccaagaacctgagggtgtgcaacgactgccatgaggcggccaagttcttgtcaaagatggtcgggagggagatcgtgctcagggatgtcagaaggtttcaccatttccgcaacggccaatgctcctgtggggattactggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0118700, RefSeq:Os04g0118700