Os04g0118800

From RiceWiki
Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0118800| Description = Disease resistance protein family protein| Version = NM_001058595.2 GI:297602078 GeneID:4334963| Length = 5361 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0118800

Description

Disease resistance protein family protein

Version

NM_001058595.2 GI:297602078 GeneID:4334963

Length

5361 bp

Definition

Oryza sativa Japonica Group Os04g0118800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1100545..1105905

Sequence Coding Region

1100605..1100641,1101428..1101505,1101761..1101818,1102901..1104680,1104775..1105749

Expression

GEO Profiles:Os04g0118800

Genome Context

<gbrowseImage1> name=NC_008397:1100545..1105905 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1100545..1105905 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgaagatggaaacgtggggattggaggcaaatacacagatgggctcatttctcattcactcagagtgtcaaaacagcgatcatgcgtccacaagtacgctgccggagccaatgtcagcctgcaatgcaggtcatcaaagcaggagcatatgagcaccactgaggtcagatttgaggactggatggcagaggctgtggtgtttggaatcctatgcaagattggatccatcttgagttcacatctaacacaggcgttcgttgcacacttgggaaaggaggtatcagttttcattgaaattgaaagcagtattaagcaaatcagaagtgagtttaggttgatgcaagctttcctgcaagacggccaagaaaaagaaagtcatagcaggctggcagaaacctttctacacgaagttcagcaggtatcatttgaagttgaagacattctggatgaatttgtctatttgtttggccaaaaacaaaccgcatctctaaaatcattgaggaacttctttccaaaatctaaaagtatgatgcactggcagagactagcagcagagctcaaagaagcgcagaaccgcctccagaatttgcgaaatttgaaggttcagtacaatattgacttatccgaagaaagtcctagttctatcaggtatgaagatagccaagttcacacaatccaacacataaagcataataacaaaattgttggttttgcaaacgagcgagactgcctacaagagctgctgatgacaaacgagaaatcatgctcaataatttccatatggggcatgggaggttcaggtaaaactactcttgtcaaaactgtttttgaaagaaaagctatcaagaatcgttttgattgcctgatctgggtaactgtgtcacaaacatatgacattactgaaataatgagaaagattatacaatgtgcattgaaggaaacttgcccagctgacctagaaagcatgtgtagtgaaggtgtagccctgaagctccaggggactttgcagggaaggacatacatgatgatcttggatgatgtgtgggatacaaatgtttggttcaacttggaaccttttctagatttgaacagcagaggaagcaaggttgtaattactactcgcataaacgatgttgcttctttggcagatgacaagaaccgccttcaactacgaggactaaacgaggcagagtcttgggacctcttttgcatgtgggcattcagacatactgaagatcaaacatgtcctctcagattggagagagtagcaagacagattgttggcaggtgtgaaggtctgccattagctataacggctgtaggcaatttgctatcattcaaaagactggattcgtttgagtgggataaattctataatcaactaaattgggaattgcacaatcgattggataaccaaggacttaacatggtgacccgactcctaggtttaagctacaggcatctaccagcccacttgaagaactgtttccttttgtccagtatctttccagaggactatatgatacacgggaagtggctaagtagactgttaatagcagaaggtttagttgaaccaaggaaaaatatgacactggaggagattgcaacagagtacattgaaaagctagtagatcgctgcctgctccaagttgtcaggagggataagcttggaagaatatggcaactccagatgcatgacattgtgagggaactggcaatttcaatatctgaaaaggaaggattctgcatgatttatactagtaaagaagcacatacatcagtggttgggtgcgagcctcgtcgtttatcagttcatgagaattatgacagagtccagcaaattataaatgctcaacgtattcgttctttctacccatatcaattggatagtgattattccgtgatgtcaaatgtgcaatgggtgtcaacaagtgctagatacttgaaggggggttttttccccaagcaacttcctgaatcaattgacaggctccaaaatctccgaactttggacatctaccttactgaaataggaaaactgcccagcggcgtaaccaggctaaggttgctacgccatctgattgcaggcaaagctgaagctacttattttggccttgccgatgtctactcaggtgtgcaaatgcctaatggaacatggcaatcgctggacataaatgtattcacaggcatttctgcaagcaacaagttggtggaacaattggctaagttaacacagctgagatcgctgaagctgtcagacgttaaaagtactcactatgccaagctatttgtatccatcagcaagatgcgtcttctacagagcctgctaattgagactgccaatagggatgagtgtgtgagcttggaagccctgaaccctgcacctcatcaccttgaactactctttatgaaaggcaaactccatgagagcgtcataggctgccacctgtttgaggtaaataggctaagcctccgagagctgaatcttcagaatagcaggctcagcattgatccgcttccatcactctccaatttttgtaacctgacccttcttggtctgttcaacacttacagtggagaaagcttgctctttcaggcagggtggtttcctaagctccaaacactcactttggctgagctgcaaaatgtcaattcaatagtgatacaggagtatagcatggcaaatctctacaacctagctctcatctgcttgaaaaatctggagtatttgccccaaggcatggaattcctaaaatctgttgaagagttcaatctagtgggcatgcaccacaagttcatggaagatgtacaagctggttcctcatatgagaaagtcaaacacataccggtagttgactactttgaccaaagcaaagggaggtgggatcgactttcacgagtttatggcaaaggtaacccatga</cdnaseq>

Protein Sequence

<aaseq>MDEDGNVGIGGKYTDGLISHSLRVSKQRSCVHKYAAGANVSLQC RSSKQEHMSTTEVRFEDWMAEAVVFGILCKIGSILSSHLTQAFVAHLGKEVSVFIEIE SSIKQIRSEFRLMQAFLQDGQEKESHSRLAETFLHEVQQVSFEVEDILDEFVYLFGQK QTASLKSLRNFFPKSKSMMHWQRLAAELKEAQNRLQNLRNLKVQYNIDLSEESPSSIR YEDSQVHTIQHIKHNNKIVGFANERDCLQELLMTNEKSCSIISIWGMGGSGKTTLVKT VFERKAIKNRFDCLIWVTVSQTYDITEIMRKIIQCALKETCPADLESMCSEGVALKLQ GTLQGRTYMMILDDVWDTNVWFNLEPFLDLNSRGSKVVITTRINDVASLADDKNRLQL RGLNEAESWDLFCMWAFRHTEDQTCPLRLERVARQIVGRCEGLPLAITAVGNLLSFKR LDSFEWDKFYNQLNWELHNRLDNQGLNMVTRLLGLSYRHLPAHLKNCFLLSSIFPEDY MIHGKWLSRLLIAEGLVEPRKNMTLEEIATEYIEKLVDRCLLQVVRRDKLGRIWQLQM HDIVRELAISISEKEGFCMIYTSKEAHTSVVGCEPRRLSVHENYDRVQQIINAQRIRS FYPYQLDSDYSVMSNVQWVSTSARYLKGGFFPKQLPESIDRLQNLRTLDIYLTEIGKL PSGVTRLRLLRHLIAGKAEATYFGLADVYSGVQMPNGTWQSLDINVFTGISASNKLVE QLAKLTQLRSLKLSDVKSTHYAKLFVSISKMRLLQSLLIETANRDECVSLEALNPAPH HLELLFMKGKLHESVIGCHLFEVNRLSLRELNLQNSRLSIDPLPSLSNFCNLTLLGLF NTYSGESLLFQAGWFPKLQTLTLAELQNVNSIVIQEYSMANLYNLALICLKNLEYLPQ GMEFLKSVEEFNLVGMHHKFMEDVQAGSSYEKVKHIPVVDYFDQSKGRWDRLSRVYGK GNP</aaseq>

Gene Sequence

<dnaseqindica>61..97#884..961#1217..1274#2357..4136#4231..5205#gcaaatgttcagttcatttgttgccactggagagacggggaagagagaagagtggggaggatggatgaagatggaaacgtggggattggaggcaaatgtattttagatgcatctaaaactatagaattatatcctatgttagatttaatgaaatattgctgatcaaacttaataaaatttcactaggaaaaaaaatctgttgtaatatacaaacgaatgttgtaatatgttacggtaacaaaatacaagttcaaaataagtacttcctctgtttttaaatattttacaccgttgacttttttaaatatgtttgaccgttcgttttattcaaaaaattttaagtaattattaattcttttcctattatttgattcattgttaaatatacttttatgtatatatatagttttacatatttcattaaagtttttgaatagaacgaacggtcaaacatgtattaaaaagttaacggtatcaaatatttagaaatagagggagtagcaaactaaattctagctagtgaacatatattgacaagtaaattttgttttttttatttattgcctgtagaagttgaagtcttacgtcacattcacatattaatctaatcttattattcttttcaaattttgtttaataaccatttaccccctccgtccaaaaagagtcaaacgagaggagagaatgtcgcatgctcttaacccaatttgtaactggtggtagtataataatttcctgcatcctccatggcctagttggatccggtttccagtgtcggcttcctcccgttccgtccagccaccgccaccgaccgggggatttacaattataacactacaaacattaacttttgctataataatattggacccacatttcatagacacagatgggctcatttctcattcactcagagtgtcaaaacagcgatcatgcgtccacaagtacgctgccggagccagtgagccaccaccacatcgatcacgcgcagctgcgcgcggccgcacataggcgaggcgcgaccgacttacctgctgtccggacaaggtcgcggaggacggcagagcgcgcgcacgccaggtgttcgacgcaattacatcgagaagaaaactctctggtagatagaattctcatctcggcttcggctgtgtgataagcaaatggtgaatttttggtttgctgtgagtgacgtctgttctttctgggtcttgaccagatgtcagcctgcaatgcaggtcatcaaagcaggagcatatgagcaccactgaggtcaggtagcagataccgaggtaactttggtccatcgttaccatctcagcagccacgggttccttgtgtatttgtcctaggctgacgcactccagcccttttgttttccaacaatttgcactcccaagtcccaactggcaactgctgttgacatttaagttttttagatcaaaaggctaccgcccagctttacttgaaaaagcataagatgtctggatacaggtttaaggctggggattccagcttacaagacaagcatttagccaagtctggcaacataagctgctggcccagcagaagcagagacaaaccagagagagcgccaaaactaccaccagattactgcacatttatccggcaaatcagctgcttcttcctgcttcttggatactggcatgcagtgaggccctcaaagcttccagctctcccctcaatttcattgggaccagatttttccactgtaagaaaaaagataaagctttatacggcacatgcataatgtcagaaatgttgacatttaagttttactcttgaatgccgattacagtacgaatcatatgatactctcgagctcaacttcctggaaggtgcaagttgcgatatttgatggttgatgcttaccacaaaatatagtctaaagtgtggcgtacatgagttcaccccatcgccattggtagcgtgagcgatcagttcaacaccgctcaacaactattcgacaaaacaccttcaaggcatctccctggcccttgtgattcctggctggctggctggttgcgaagaattaattcaggttccttctctcgtatctcttagattaatttgatgggtggtttcgatttcatacttccataagaagggtgttcggctatatcacaaattagattgtgtctatattacatttttatttcagtgctagatggatattttgtttgaaagctcacacaatcatttgttttcgatttaacacaacttttcagcaataccagtgcaaagtttgtacatatgatgatcgatgtttcacgtccaatcccacttttcaggtccactgataataactgtaattgagccagctatatttgactgcaagatttgaggactggatggcagaggctgtggtgtttggaatcctatgcaagattggatccatcttgagttcacatctaacacaggcgttcgttgcacacttgggaaaggaggtatcagttttcattgaaattgaaagcagtattaagcaaatcagaagtgagtttaggttgatgcaagctttcctgcaagacggccaagaaaaagaaagtcatagcaggctggcagaaacctttctacacgaagttcagcaggtatcatttgaagttgaagacattctggatgaatttgtctatttgtttggccaaaaacaaaccgcatctctaaaatcattgaggaacttctttccaaaatctaaaagtatgatgcactggcagagactagcagcagagctcaaagaagcgcagaaccgcctccagaatttgcgaaatttgaaggttcagtacaatattgacttatccgaagaaagtcctagttctatcaggtatgaagatagccaagttcacacaatccaacacataaagcataataacaaaattgttggttttgcaaacgagcgagactgcctacaagagctgctgatgacaaacgagaaatcatgctcaataatttccatatggggcatgggaggttcaggtaaaactactcttgtcaaaactgtttttgaaagaaaagctatcaagaatcgttttgattgcctgatctgggtaactgtgtcacaaacatatgacattactgaaataatgagaaagattatacaatgtgcattgaaggaaacttgcccagctgacctagaaagcatgtgtagtgaaggtgtagccctgaagctccaggggactttgcagggaaggacatacatgatgatcttggatgatgtgtgggatacaaatgtttggttcaacttggaaccttttctagatttgaacagcagaggaagcaaggttgtaattactactcgcataaacgatgttgcttctttggcagatgacaagaaccgccttcaactacgaggactaaacgaggcagagtcttgggacctcttttgcatgtgggcattcagacatactgaagatcaaacatgtcctctcagattggagagagtagcaagacagattgttggcaggtgtgaaggtctgccattagctataacggctgtaggcaatttgctatcattcaaaagactggattcgtttgagtgggataaattctataatcaactaaattgggaattgcacaatcgattggataaccaaggacttaacatggtgacccgactcctaggtttaagctacaggcatctaccagcccacttgaagaactgtttccttttgtccagtatctttccagaggactatatgatacacgggaagtggctaagtagactgttaatagcagaaggtttagttgaaccaaggaaaaatatgacactggaggagattgcaacagagtacattgaaaagctagtagatcgctgcctgctccaagttgtcaggagggataagcttggaagaatatggcaactccagatgcatgacattgtgagggaactggcaatttcaatatctgaaaaggaaggattctgcatgatttatactagtaaagaagcacatacatcagtggttgggtgcgagcctcgtcgtttatcagttcatgagaattatgacagagtccagcaaattataaatgctcaacgtattcgttctttctacccatatcaattggatagtgattattccgtgatgtcaaatgtgcaatgggtgtcaacaagtgctagatacttgaaggttctagaattaagcaatattccaatcacaacactgccgagagacattgggagcttgttcaatttacattatttaggattgagacgaaccanaggggggttttttccccaagcaacttcctgaatcaattgacaggctccaaaatctccgaactttggacatctaccttactgaaataggaaaactgcccagcggcgtaaccaggctaaggttgctacgccatctgattgcaggcaaagctgaagctacttattttggccttgccgatgtctactcaggtgtgcaaatgcctaatggaacatggcaatcgctggacataaatgtattcacaggcatttctgcaagcaacaagttggtggaacaattggctaagttaacacagctgagatcgctgaagctgtcagacgttaaaagtactcactatgccaagctatttgtatccatcagcaagatgcgtcttctacagagcctgctaattgagactgccaatagggatgagtgtgtgagcttggaagccctgaaccctgcacctcatcaccttgaactactctttatgaaaggcaaactccatgagagcgtcataggctgccacctgtttgaggtaaataggctaagcctccgagagctgaatcttcagaatagcaggctcagcattgatccgcttccatcactctccaatttttgtaacctgacccttcttggtctgttcaacacttacagtggagaaagcttgctctttcaggcagggtggtttcctaagctccaaacactcactttggctgagctgcaaaatgtcaattcaatagtgatacaggagtatagcatggcaaatctctacaacctagctctcatctgcttgaaaaatctggagtatttgccccaaggcatggaattcctaaaatctgttgaagagttcaatctagtgggcatgcaccacaagttcatggaagatgtacaagctggttcctcatatgagaaagtcaaacacataccggtagttgactactttgaccaaagcaaagggaggtgggatcgactttcacgagtttatggcaaaggtaacccatgatctgctcatcacctcatcttctataagctgcataatgcattcttttgaccttcagtgatcaattccctatccttgcagaccaagacaacaagcatcagcagtaagcaaataaaagatggaaatatacccggtctccaagttatatatatatactag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0118800, RefSeq:Os04g0118800