Os04g0119500

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Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0119500| Description = Similar to Membrane related protein-like| Version = NM_001058601.1 GI:115456931 GeneID:4334969| Length = 3087 bp| D...")
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Gene Name

Os04g0119500

Description

Similar to Membrane related protein-like

Version

NM_001058601.1 GI:115456931 GeneID:4334969

Length

3087 bp

Definition

Oryza sativa Japonica Group Os04g0119500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1136024..1139110

Sequence Coding Region

1136401..1136840,1136925..1137006,1137621..1137704,1137796..1137978,1138310..1138484
,1138586..1138824

Expression

GEO Profiles:Os04g0119500

Genome Context

<gbrowseImage1> name=NC_008397:1136024..1139110 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1136024..1139110 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcggcgttgctcgatctgctcatgggggtcttccgccagccgaccctcggcggcgtcgccctcgagctcgcctccctcgccgcgccgctctggctcgccgccctcgtcggcctactcatcggctgggcgtggcgcccgcgctgggccctcgtcgtcgtcggggaggcgccgccgccgccgcgtgccgccgccgaggactcctgccgcaagaacgagctagttgccgccgttcctagaactgcgatggccgccgccgcgccggaggaggatgagggattggccgtcgacaccggagatttgatgcacctccgccgccttgtcgaggagaaggacggcgggccggcgtggattcacatgatggacaagacgctgcccacgatgcgctaccaagcatggaggagagatcctgagggtggcccgcctcaataccgcagtagcactatctttgaggatgcatcgccagaagttgtcagggatttcttctgggatgacgagttccggattaagaacacttgggacgacatgcttcttcagcacgatacgttggaggagtgcacaaagactggaacgatggttctccggtgggtcaggaagttcccgttcttctgcagtgacagggagtacattatcggtcgcaggatatgggcatctggaaagacgtattactgtgtaacaaagggtgtgcctcgcccctctgttccaaggtgcaacaaacctcgtcgtgtggacgtgtactactctagttggtgcatccgtccagttgaatcaagaaacggtgatggctcaatgaccgcatgtgaggtgctcctgttccatcatgaggaaatggggattccaagggaaattgcaaagctcggtgttcggcaggggatgtggggctgcgtcaaaaggattgagcctggcttgagggcataccaaatcgcaaggactgctggcgagcccctttcaaaatgcgctgccatggcacatgtcaacacgaaggttgatcctgatgagctcatcactgcagaggacaagacagaggccagttcaaccaacaacgctgaagctgagaaaccaaagcactggacaggcaatatacccaaagtcatccttgtaggtggcgcagttgccctggcatgcacgtttgaccatggactgttaacaaaggctctcatatttggtacggcgaggaggtttgcaggaccaggaaggagatga</cdnaseq>

Protein Sequence

<aaseq>MSALLDLLMGVFRQPTLGGVALELASLAAPLWLAALVGLLIGWA WRPRWALVVVGEAPPPPRAAAEDSCRKNELVAAVPRTAMAAAAPEEDEGLAVDTGDLM HLRRLVEEKDGGPAWIHMMDKTLPTMRYQAWRRDPEGGPPQYRSSTIFEDASPEVVRD FFWDDEFRIKNTWDDMLLQHDTLEECTKTGTMVLRWVRKFPFFCSDREYIIGRRIWAS GKTYYCVTKGVPRPSVPRCNKPRRVDVYYSSWCIRPVESRNGDGSMTACEVLLFHHEE MGIPREIAKLGVRQGMWGCVKRIEPGLRAYQIARTAGEPLSKCAAMAHVNTKVDPDEL ITAEDKTEASSTNNAEAEKPKHWTGNIPKVILVGGAVALACTFDHGLLTKALIFGTAR RFAGPGRR</aaseq>

Gene Sequence

<dnaseqindica>2271..2710#2105..2186#1407..1490#1133..1315#627..801#287..525#agacgccatgagcgccagagagagattttggtgccaatagacacacactgatttcatcatcatctaggcccaaaaacctctactcttccgcgtcttggaaaattcttctcagattgcatcaccagtaggaggattgtcagattgctgctgctgctcttgtactagttgtattcaggattcagaatttgggcggacgacgacgaggataaatcggatcttttcttcctccttgattaattcctgaggcgtgtgtgtgattagttcaaaaaagaaaaatagaagcgagatgtcggcgttgctcgatctgctcatgggggtcttccgccagccgaccctcggcggcgtcgccctcgagctcgcctccctcgccgcgccgctctggctcgccgccctcgtcggcctactcatcggctgggcgtggcgcccgcgctgggccctcgtcgtcgtcggggaggcgccgccgccgccgcgtgccgccgccgaggactcctgccgcaagaacgagctagttgccgccgttcctaggtgagggtttatggtgtttcagaaatcaaacgagcctcgattgggtgaattcgagtggacatctggtttgtttactgatactgtggtgggtgtggatgcagaactgcgatggccgccgccgcgccggaggaggatgagggattggccgtcgacaccggagatttgatgcacctccgccgccttgtcgaggagaaggacggcgggccggcgtggattcacatgatggacaagacgctgcccacgatgcgctaccaagcatggaggagagatcctgaggtagtactacttaatccggtgtgaacattcaattcaatcgatatctcgccgcagcggcgtgaactcaattcgatggatacttactagtacatacatggaggaatatttcttgattctacaatcgagaaattcgggtttaggggattgtgtgtttgttggggagcaccggccgaattgtctctcaagtttgttgttgctgtgttagttttgaattactgctaagaaatacggtagatgataaactgataataaagttcatagttgaaaatatctggtcattaagccctaattctttagaattaaagagtttatgtggtttgtttcgttctagggtggcccgcctcaataccgcagtagcactatctttgaggatgcatcgccagaagttgtcagggatttcttctgggatgacgagttccggattaagaacacttgggacgacatgcttcttcagcacgatacgttggaggagtgcacaaagactggaacgatggttctccggtgggtcaggaaggtgagcttttcgtatgatatctctggtattctttgtacagagcaccagcaaactatatcttttgcttatactatatgccttggctgtgcagttcccgttcttctgcagtgacagggagtacattatcggtcgcaggatatgggcatctggaaagacgtattactgtgtaacaaaggtatagaacgaaacaatctgctttttttttctattagcaagttatttaatgctcctacataagttcctgtaattgcttttacaattctcatagttcctttcaagcaactgtttagctggaaattttgttgcatactgcattatcatcctattgcacaagggaaaaaaaaactccgtttttgtttgtttacagcacgcagtaggcatgaattctctgaaccaccaactatttaggtccggataaccaaacttatcatgtgttttcaaccttgcagtctaggtaatactatattctcaggccattccacacaatggctgagatgcttgtcctgtgagtaaaggcattattagctgttatgaggtccttttcaaattcctatgtttgccgacaaggccatgcctgtagagttgctcatgataatggcatgctttttgttctattgtggattccagaatgagtctaagagaagttacatttgccctttttacctctggtagtgctaagtatacttgctgcatcctggtcatctatagctacatatagcagttgtatgtttaaatatttaaccgtatatgcgcgaattaggttattgaacttttgtcataatttttcagggtgtgcctcgcccctctgttccaaggtgcaacaaacctcgtcgtgtggacgtgtactactctagttggtgcatccgtccaggtaattttgcagttccatcgctccattttgcgggatgacacattttgtgaggccaatgaatctaacacttgttctttttatcagttgaatcaagaaacggtgatggctcaatgaccgcatgtgaggtgctcctgttccatcatgaggaaatggggattccaagggaaattgcaaagctcggtgttcggcaggggatgtggggctgcgtcaaaaggattgagcctggcttgagggcataccaaatcgcaaggactgctggcgagcccctttcaaaatgcgctgccatggcacatgtcaacacgaaggttgatcctgatgagctcatcactgcagaggacaagacagaggccagttcaaccaacaacgctgaagctgagaaaccaaagcactggacaggcaatatacccaaagtcatccttgtaggtggcgcagttgccctggcatgcacgtttgaccatggactgttaacaaaggctctcatatttggtacggcgaggaggtttgcaggaccaggaaggagatgaagttaagtcctaatgaacaattcttcgcttatcatttttcaacagaaggtacaaaaggtcgcccgcaaagctgtcatcgtaccaatagtccaatacagcagatgatgcagatcaagccttttttgcagttcagatagtgccattgttgcatattctgggttggtttgtccatgttagatcagttcatgaaaagatctagttcgagacaaaaaggagtgttcgtttagcagactaggggcatactgctgttactgcagtttctgaggattagaactagctaagctgggattttgagaccaaaaaaccggttgtatggtgtacaatgtattaacgctcaaatttgaggtgctataaaatatagtgctattgtttgttac</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0119500, RefSeq:Os04g0119500