Os04g0119800

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Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0119800| Description = Conserved hypothetical protein| Version = NM_001058602.1 GI:115456933 GeneID:4334970| Length = 6219 bp| Definition ...")
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Gene Name

Os04g0119800

Description

Conserved hypothetical protein

Version

NM_001058602.1 GI:115456933 GeneID:4334970

Length

6219 bp

Definition

Oryza sativa Japonica Group Os04g0119800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1147780..1153998

Sequence Coding Region

1147780..1148164,1151769..1151975,1152043..1152794

Expression

GEO Profiles:Os04g0119800

Genome Context

<gbrowseImage1> name=NC_008397:1147780..1153998 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1147780..1153998 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gctcacgagcctctgtcttggtttgcacctgcaaatggaccgacgacgacgaccacggacgcctcttctgaccgcactgttgctcgtctcgctggctgcggcggcggcggcgagcggcgcgccctgctccggtctatcaagccgctcttcgtcggcggcgagttcggctacggcgatgcctggaacgagagcaccgactgctgcggctgggaaggcgtggtctgcggcggcggcggcggcggccaccacgtggtgtcgctgtctctggtccaggccggcatcgccggcgccgtcgacggcgcggcgttcgcggcgttcacggcgctgcaggagctggacctgtcgtggaatcgaatctctgccttctctcttccatctgcaggaggtgagcgtgcatttcagaagcttagcaagctctcgctttcgcacaacagtctaacaaatgaaggcgttgctgctctagttatcaaccgaactacactttcagagctgtaccttggcggaaaccagttacttacaacaagttggatatccaatttgacgtctcttagggtggttgatttatcccagaacttcttacacggatacaacggtatatgtaacctccatcaactagagtacctacaccttggtgtcaacatgctacatggaaccataaattcatgcttgggaaaactacaacaattgaagtacctgaacatggaaagaaactttctcatgggggagattgcaccgaacttacttatcaacttgaccaaactggagactatacacctgggggtgaacaatcttaccggcacattcatgctctcctggctagcaaacagctcaaacctcgttgatgttgtcctctcacacaactacaatctgaaaatcgaaaccgagcttgtgagatggacaccgttgttccagctggtatacttgaatttaagcaactgtgttatcaataggcgaagcaatggagttgtgccgacttttctgtcaacccagcttagcctatccgggatcgatctctcgcattgttcgctccaaggcaggattccaccctggctgttctacaatctatctgattttgtcttgctcaatggcaatagaatggatgtcattgatatggatgggcttggtggtaacatacctcaccggtgcaggtgcttgatttgtcagagaacaaaatatcgatgtcgatcccgaccaactttggaagcatttttcagtttttggactactgtgacatgtcctccaacaggttgtacggtgggattccatcattggcagaggcaacatcattggaggtgcttgacttgtcatctaacaacctcaatgaggaaatattgccaacattaa</cdnaseq>

Protein Sequence

<aaseq>AHEPLSWFAPANGPTTTTTDASSDRTVARLAGCGGGGERRALLR SIKPLFVGGEFGYGDAWNESTDCCGWEGVVCGGGGGGHHVVSLSLVQAGIAGAVDGAA FAAFTALQELDLSWNRISAFSLPSAGGERAFQKLSKLSLSHNSLTNEGVAALVINRTT LSELYLGGNQLLTTSWISNLTSLRVVDLSQNFLHGYNGICNLHQLEYLHLGVNMLHGT INSCLGKLQQLKYLNMERNFLMGEIAPNLLINLTKLETIHLGVNNLTGTFMLSWLANS SNLVDVVLSHNYNLKIETELVRWTPLFQLVYLNLSNCVINRRSNGVVPTFLSTQLSLS GIDLSHCSLQGRIPPWLFYNLSDFVLLNGNRMDVIDMDGLGGNIPHRCRCLICQRTKY RCRSRPTLEAFFSFWTTVTCPPTGCTVGFHHWQRQHHWRCLTCHLTTSMRKYCQH</aaseq>

Gene Sequence

<dnaseqindica>1..385#3990..4196#4264..5015#gctcacgagcctctgtcttggtttgcacctgcaaatggaccgacgacgacgaccacggacgcctcttctgaccgcactgttgctcgtctcgctggctgcggcggcggcggcgagcggcgcgccctgctccggtctatcaagccgctcttcgtcggcggcgagttcggctacggcgatgcctggaacgagagcaccgactgctgcggctgggaaggcgtggtctgcggcggcggcggcggcggccaccacgtggtgtcgctgtctctggtccaggccggcatcgccggcgccgtcgacggcgcggcgttcgcggcgttcacggcgctgcaggagctggacctgtcgtggaatcgaatctctgccttctctcttccatctgcaggaggtatgtacgcatgcatccatcttcgtcagaatcgaaccaagcataacttaatttgaagttccaaaatggacaatttgatttagaattgcaaagtttttcagatttgattttatcttctgcgaggatgatgatggaattgattttattttaatctcaaccagcatgattgtgtgcatgcctatatggattctgcgggcttaatcttattttaatcatattaattacagtttttttatcagcgaaacactaaactgtacattatgaaaataatagttactattaaaatatttaaaagatatataggacagtatgttgaatattttgtctcgtgcatatataaaacaacaaatctaattttaatggttaaaatataattattattatcgtcaaacttcatgtgagattttatggatacgaattcaatgatataattggattattaaataagtgattgtgatgatcattagaggccgagagaaagaaaaaggagagaagagctgttgagctagtgggcttgggctgctttggttcgccgagctttgctagcgttaagtgcttgctggcagcaagcagcaggcctttggacattgtgcccacgttagggttgtatgataccattctttaactaaaacttgccatgttgtaggtagcaaaaaaattatgaaatttgatcaaaatttagttaaattagttcatgaaaagttggtaaaacgtagaaattttttgaaagaacccatttcaccctggttggtccgttgtcacaacccatggggaatgcccttcgaattgaaagaacacacatgttgctcttcatatttaattgattcaattcgatctaatcatacaaattacagaaacactggaaagcctttcaccaagagagcagctaagcatgtatatccgtatctattgtcactcaaacagttcaaggttattttagtgtgtacggctaggacttatcttaaaagtagtagaatttaatttgtagctcaatgattttgcattttagtttggataaatttgaaccaagtaacactggtcgaaggatcagatattcaaaggaaataagttatagaagggtaaaagactactatttcagatattcaaggctccaggccattggtgccggcgtaacatggtctgtgttggtctcagcctcgccgtggtcggccgccacaatatactgtatggccattgtttccgctactttgtttgcaccaccaactgaccaacataaatgcccaagacaactagacagcgagagttgccagaccaagtaggtcatttggtcttccgtttgcctaggaacaagggcatctatttaagccacaaatgaataatacatcctatattttctctgaaatatttgggtatgccggtgcatacccggcaccacccctaggtccacccctgatggtcccatctcgcgagcagcattagcagtagcgtggccgaatttaaaattttctatgtaaagtgaggacataaacgtaaacggttatatcagaggtgtggttcaaccaattggtttggatataattatttttggtggatgcactaaattacaagaaaaaaaaattgatacccacatgttattaatcttttacttatcgttgtatgtctacgtgctcccacatagtattggcccaatgtctgtttttttcctcgagttgggtacacaaggaaaagcattttccttgttaaaaaagagctaattgcaggttgggcaatgtatttttctagcaaagattcaatttgatcatcttttgtccaatatttttgcttaaaaccatatatatctttggataggggtgggcatttagtcagaccgaacaatttggtctcggccttcagtctttagtgaaatttcggtcatcagattcttgagacagattaatcctgaacaaaatcgaagatcgactactttggtcagtctggttcagccttggtcacaactgaactaagcgctttgtgttcacagccaaaataaaaatcactggtgaagaaacaattacaccatcgaactgactgcaaaatatgtaattacagacaaaaagatcacagaaaacaattacacatatacatgctgtattgctgtatagggctattgggctgcacagtgaaattcggccattttcagttaaccgagccatataaccagactaaatttggttagtacactttgatgactgaatttctcagtctcgttttttttccctcaatctgttcggctcggtctattttgtctacctctatatctttggcttggaggaaactatcggggtctagtggctagcagcatggttggtgagttagtcatcccaggttcggttcctcccttctacaaaatatttgggggatgtctctccctccaaatattgtttttttatatctttggctaggctatctcacactttttgctactgtctctccaatctcttctccacctccaattcctgacctccaccatggccatcgtcagctcaacccttgacctcaagctcatgatctagctctgtccacctagagctccaacgattactttctctagatgacaatagagagctgaagctcggtagcaggcctctctaatgcactcagatcctagcaactggcagggttggcaacggggtggatcagggctgggttggacaagattagccttagccttgactttctcccccaacctctggcctaaaggagaaaacagtgccaaataaagccccgcccctggtcttgctagggacctaacctcccatcaaggcctcattagttgctggcaggcaacaaagacacataaaggtggtgtggaggtgaggttggtgggcatgtggtgggtggtggtgggaggcatgtagtcaagggagccgagggaggcggcggagcagcagctgcacgtttcgtgcgatgaaaatgagggtggcgtcactcgggactgggagagggagttgttgtgcatggacatacacatcgatccttgagctagtaaggtatgtggggattagtttagatccattttatactccaagtatttgggccagcctgatattgtgggtttttctcttgtaacttgaggagatatcctcctccattgagattagtttcttggccctaggccctcatgatgtcggggcgccatgctgatggattcgcaggtgcagattttgctctcgtcccttagatgcgggtctctacacccattagggaaactgtcacccatagcagccagatttgagaaagacgaactcagcccttggttgtgcttatctgagagtccaccctctgctaagcttgatctatgcttgcatcacccaaaactagaagattgaacttgtgcaccctaccccaatgatagagctccatttcctacaaccgtgccatgctgcccaagctcgaggtccatcttggcctatgtcctcatggcccgtggattttacctctacatctgagtgccgatttgagtagtgggaacttaaggatatagtatatcgattcatgtctaactctacatttttttaaaaaaagaaagagttttgcttgccagtatgttttaacaatatgcacaataaaatagaataactcagattgttatgtaccaatttaggtgagcgtgcatttcagaagcttagcaagctctcgctttcgcacaacagtctaacaaatgaaggcgttgctgctctagttatcaaccgaactacactttcagagctgtaccttggcggaaaccagttacttacaacaagttggatatccaatttgacgtctcttagggtggttgatttatcccagaacttcttacacggatacaacggtatatctccgctctttttgttagtatccagggcaatttatccaatatttgtgttttagttttgcaggtatatgtaacctccatcaactagagtacctacaccttggtgtcaacatgctacatggaaccataaattcatgcttgggaaaactacaacaattgaagtacctgaacatggaaagaaactttctcatgggggagattgcaccgaacttacttatcaacttgaccaaactggagactatacacctgggggtgaacaatcttaccggcacattcatgctctcctggctagcaaacagctcaaacctcgttgatgttgtcctctcacacaactacaatctgaaaatcgaaaccgagcttgtgagatggacaccgttgttccagctggtatacttgaatttaagcaactgtgttatcaataggcgaagcaatggagttgtgccgacttttctgtcaacccagcttagcctatccgggatcgatctctcgcattgttcgctccaaggcaggattccaccctggctgttctacaatctatctgattttgtcttgctcaatggcaatagaatggatgtcattgatatggatgggcttggtggtaacatacctcaccggtgcaggtgcttgatttgtcagagaacaaaatatcgatgtcgatcccgaccaactttggaagcatttttcagtttttggactactgtgacatgtcctccaacaggttgtacggtgggattccatcattggcagaggcaacatcattggaggtgcttgacttgtcatctaacaacctcaatgaggaaatattgccaacattaatagggaatttgtcaattctaacatctcttctactctccaataatgacctgacagggcctatgccacctttccattggaatttgggtagtttgaagcacctcagccttgagaacaaccgatcttcgggatggctatctccattgctgtcgaacagcagtaatctcaagacactcaatgtgagaaacaaccatctatcaggaatcatcccggatggcctcctgagcttccaacagcttggtgtgatcctccttggagggaatgattttcatggtccaataccattggacctttgcttcaacaactatctccactttgttgatctctccaacaatcaattctctggggagataccaaattgcttctacaatgatttctggacagatttgccaatgtacttcaacgatgacccattctcaggcaatatcacagagcgcatgtctgtcgacttcacgacgaaaggcgagaaccttacctacatgggagagcctctagtgctcatgacgggcattgatctgtccatgaatcaattgtcaggcgccatccctccgccattaggtttcctgaggcagctcaagtctctaaacttatcacataaccaacttgttggcccgataccagagacattcatgtatatgcaggatatggagagccttgacctctcatacaaccacctcaatggcagcctgcctatgcagctggcaaatctctccttcctgtgctcgttcaatgtcgcctacaacaacctctctggtgagatacccttccaacaacagcttgggacattcgatgaatcggcattcgaggggaatgacaatctctgtggtgaaatcatcaacaaaaactgctcatcagtgctgcatcagaatcaaggagtgttcgacgccattgacacgtcacttgttttctggtcctacgtttttgggtgttttgcacttggattttggggcaccgtggcattgctgatatgggatgaagtgtgcaggaggagactgtgtgacttgatggatgctctaatgtttaagctgggttgggaatttgtgccttgaatcctgatatgtctagctaagagtctaggagacatggaaagacagagcaatcccttctttttttttgcacgagatgcacatgctgtcacatcctgattttcgtttcaggatttataaattatttaataaattaataatagaatttatattaaatgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0119800, RefSeq:Os04g0119800