Os09g0563250

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0563250| Description = Conserved hypothetical protein| Version = NM_001189053.1 GI:297727236 GeneID:9266663| Length = 2751 bp| Definition ...")
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Gene Name

Os09g0563250

Description

Conserved hypothetical protein

Version

NM_001189053.1 GI:297727236 GeneID:9266663

Length

2751 bp

Definition

Oryza sativa Japonica Group Os09g0563250, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23211289..23214039

Sequence Coding Region

23211328..23211348,23211455..23211580,23212143..23212223,23212307..23212495,23212632..23213636

Expression

GEO Profiles:Os09g0563250

Genome Context

<gbrowseImage1> name=NC_008402:23211289..23214039 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23211289..23214039 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaatcagtttattctggcttgcaattgaatttggagtgggcattgctgttattgtactatgctttgttgataagaatgcattgagcaacattcaggacaagcttgggaatggcatgactcgtgctccatttgctgttatagtgggtttatttacacttctttcgttagttgcctgcatacctttaggggaacttttcttcttccacatgatactgataagaaaggggatcacaacctacgactatgttgtggcaatgagagctatgagcgaggcagcaccagaggatgatgaagaagcacatatcacctactcaccatcaaattcagcaacaacaggattcagtgttggaagctcacttggcctccaccacaagggtgcttggtgcacacctccaagaatatttattgatcaggatgaagtgattccacatttggaccctgggatggtaccttcaacggttgatcctgatgctgctggatatgccgaaagagcaaacaaatctaagaagcctgtcaaaatcagtgcccggagccttgcaaagctagatagaaatgaggttatgaaagctgcagcaaaagctcgggcatcatcctctgttctccgaccagtagacgctcgccgtggtcatgaaggtgatcttagctccagcggaaatgccagtgttaggagtagcatgagtgttgactacagcggcacaaaggaatcaagaggtgagatgagactgtctcctcttcagaactcatacccccaaagccttgcaagccaggatgactacgagactggcacacagactgcaagcagtttgagcagcccggttcacatccacaagcttgcctctcattctcagtttcatgcacctcctcatcaacctccaccccctgaaaggcctgtgccggggatagtgccagggatagtgcggccgcctgttcctaccacacagataaccaacccaatgttccagtcagccacatcttatgttcgggagaaccggagagcctctgttgtctgggaccaggaggctggtcggtatgtttcagtgcctgcgcagacaagggcagttcctggtcttgatctgccagcaagaaccccgcgtttcttggcaaatccaactggtgagtcaagcaaccatgggaaaaatcttgcacctgcaaacgcttcttcctcggcaatatcatcagggcagccatctgagagattgacgtacactgggcagtcgatattctttggcgggccaattctgagcacctcaggtacgaacgctcagaggagcgaagcgggcacaagagcacgacctgatggaagtagtgatcctcctaatgccttccagcgtgatacccggggcgagagagcacgcacgggctccttcccggtgtttgctcctgggacttttcagaagaacccaccatttgacaagtga</cdnaseq>

Protein Sequence

<aaseq>MAISLFWLAIEFGVGIAVIVLCFVDKNALSNIQDKLGNGMTRAP FAVIVGLFTLLSLVACIPLGELFFFHMILIRKGITTYDYVVAMRAMSEAAPEDDEEAH ITYSPSNSATTGFSVGSSLGLHHKGAWCTPPRIFIDQDEVIPHLDPGMVPSTVDPDAA GYAERANKSKKPVKISARSLAKLDRNEVMKAAAKARASSSVLRPVDARRGHEGDLSSS GNASVRSSMSVDYSGTKESRGEMRLSPLQNSYPQSLASQDDYETGTQTASSLSSPVHI HKLASHSQFHAPPHQPPPPERPVPGIVPGIVRPPVPTTQITNPMFQSATSYVRENRRA SVVWDQEAGRYVSVPAQTRAVPGLDLPARTPRFLANPTGESSNHGKNLAPANASSSAI SSGQPSERLTYTGQSIFFGGPILSTSGTNAQRSEAGTRARPDGSSDPPNAFQRDTRGE RARTGSFPVFAPGTFQKNPPFDK</aaseq>

Gene Sequence

<dnaseqindica>40..60#167..292#855..935#1019..1207#1344..2348#tgtgttggacggaagaactatttcacgttcatttcacttatggcaatcagtttattctgggtttgtaatgctgacttgtttatatccttttctaagttgttatacaggtgttgtagagtgtttcttttcttgaattgttctgaatatttagcctcttgtgtgacagcttgcaattgaatttggagtgggcattgctgttattgtactatgctttgttgataagaatgcattgagcaacattcaggacaagcttgggaatggcatgactcgtgctccatttgctgttatagtggtaagtatcatacgattttttatcctgtagcttttagtgtttatgaatctcctcttggttataaggagtcatctgtagaagcatctttccactgatatctgatgactgatgagctaccacaacttagcgactaaatagaactacaagtgatgtgcgcaattgcttcacaaaccccattcttagcacctcatcgttatagcttacagtgaaggagaggaatgtgatggtgagccggtgacaccagaaccaaacatgcatctgaatcacctcacatcctctttttcactgcacaaggataggccacagtgaggtgtgaaaactgggtttgtgaaattactgtgtcgtctgcacataacttctgtgaatgtatttaattttaggaatctctaattttttacagcattttatgtcttgttagctcttctatctgttattcccttcacttgttgaaacgcatatttgcatattggatgtatattgagcaatacttaccggttcttaatttttaatattgctttttttttgctgataattaactgaataggaaatttcttatgtgcagggtttatttacacttctttcgttagttgcctgcatacctttaggggaacttttcttcttccacatgatactgataagaaaggtttgcttcaggattcttaaatggaaatgtaacacatatccaattgatatacattctcaactatgtcgcttgtgtatattcaggggatcacaacctacgactatgttgtggcaatgagagctatgagcgaggcagcaccagaggatgatgaagaagcacatatcacctactcaccatcaaattcagcaacaacaggattcagtgttggaagctcacttggcctccaccacaagggtgcttggtgcacacctccaagaatatttattgatcaggtgagcctgcatttttcaaatcgcaattatgtggaagttaaattacagctccaaagctggaatacaatataattatgatattgtaagcactttctgaagccctgctaaatttaattgtgctgaaactttccactaggatgaagtgattccacatttggaccctgggatggtaccttcaacggttgatcctgatgctgctggatatgccgaaagagcaaacaaatctaagaagcctgtcaaaatcagtgcccggagccttgcaaagctagatagaaatgaggttatgaaagctgcagcaaaagctcgggcatcatcctctgttctccgaccagtagacgctcgccgtggtcatgaaggtgatcttagctccagcggaaatgccagtgttaggagtagcatgagtgttgactacagcggcacaaaggaatcaagaggtgagatgagactgtctcctcttcagaactcatacccccaaagccttgcaagccaggatgactacgagactggcacacagactgcaagcagtttgagcagcccggttcacatccacaagcttgcctctcattctcagtttcatgcacctcctcatcaacctccaccccctgaaaggcctgtgccggggatagtgccagggatagtgcggccgcctgttcctaccacacagataaccaacccaatgttccagtcagccacatcttatgttcgggagaaccggagagcctctgttgtctgggaccaggaggctggtcggtatgtttcagtgcctgcgcagacaagggcagttcctggtcttgatctgccagcaagaaccccgcgtttcttggcaaatccaactggtgagtcaagcaaccatgggaaaaatcttgcacctgcaaacgcttcttcctcggcaatatcatcagggcagccatctgagagattgacgtacactgggcagtcgatattctttggcgggccaattctgagcacctcaggtacgaacgctcagaggagcgaagcgggcacaagagcacgacctgatggaagtagtgatcctcctaatgccttccagcgtgatacccggggcgagagagcacgcacgggctccttcccggtgtttgctcctgggacttttcagaagaacccaccatttgacaagtgatttcctgttcttgatgtcatctctgctcaagagcttccatgacaatagaatgaatgatgcatctgcacttggatagttcagatcagttgaagaggctgcctcttctggtgcagccacaagaagtagcaaaaaacagagagagagaggatgatttttagaatactttagagaaggttgctcaaggactaactttgttcaatgttcagagagtgacattcactgactggtgcgcgtgtgttttgtttgcgtgcgtgttaggaattcagaaatttgattcgtgacaggtggtaggagagctaattgttcctgatatgaaatgttgatcatctccctccagttgggcttcgtgcgcgctggagatgtttggagtgttctttgcagttgctgtttattcatcttggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0563250, RefSeq:Os09g0563250