Os04g0120000

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Revision as of 10:56, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0120000| Description = Peptidase S8 and S53, subtilisin, kexin, sedolisin domain containing protein| Version = NM_001058603.2 GI:297602080 G...")
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Gene Name

Os04g0120000

Description

Peptidase S8 and S53, subtilisin, kexin, sedolisin domain containing protein

Version

NM_001058603.2 GI:297602080 GeneID:4334972

Length

6982 bp

Definition

Oryza sativa Japonica Group Os04g0120000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1171479..1178460

Sequence Coding Region

1171479..1171676,1171767..1174000,1174086..1174337,1174418..1174528,1174618..1174699
,1174974..1175079,1175820..1176433,1176562..1176629,1177525..1177663
,1178132..1178321,1178357..1178460

Expression

GEO Profiles:Os04g0120000

Genome Context

<gbrowseImage1> name=NC_008397:1171479..1178460 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1171479..1178460 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaacgaaaaggttccatcgaacgcaccaatagcgcctcaagaaggtaacgctcctcaaaattccggtagcaataagcatccaggcgcttctagtgaagaaacgtggcgcacaccaagtgacccgtttccaatggaaataacacaagtcgccccccgcgatgatgatccggactacatacctatcgaacaggccatggtagtccgacgccgctcgaaacgtaaagccgggaggaacaggacagagcaagaagttgagatggacaccgctacgtctgcacctgaacgtacggagacatctacaagtgcaggcgggagtgggaaaaaaagacgtggtgagagaagcaagaataaattacccaaggaaacttacaacgtgattgctctcgatcaggatgggaagcccatcgagccaccgatagtgcggtccaagttcagcaacgcctgtggcactctagtcaggacgcgttgtcccattaatgtcaagttgtgggaaacagtggacgacaacatcaagacacttctctggaatgagttgcagaagtattttgtgttccctcctggatcagaggttagggggagagattacgcacttaaaaagatgggagatcgatggcgacagtggaagtccgatctaaatcgggattatgttcagaagaatctcccaccgtttacggattatggacatatatcgcaggctgactgggacacgtttgttgcggatcgtacaacagctgaagcattggctttgaggaaaaaaatgtccgagctcgcgaagaagaacaaatatccccatagattggggtcgagcggatacgctggtcacgtcgatcaatggcgggagatcgagcaaagatttgccgcggccggtaagcccctgctggtagaccccatggttgaacgtagcaagaactgggtttgggcgcgcagcacaggtcaagtctcggatgagggagacatactattcgagactccagacatagaagaagtgactactaatttgcagcagatagtcgagaaagaaagatcaggacagttcgtcccacggagggagagagatcagcttactgcggcgttggggacggctgaacactctggacgtgtaaggggtttgtcctcaaagacaagttggaaggtcgggtttccacaagacgcaccaagttataagaagagagacaaatacaaagaacaactatcggacaagatctatgcgcaagtgaaggaacacttctactcgttggcagctgaaaacccgacagcatttccaaggttattccctgatagccagcaacccacacaatccgcacagcaaacaactaatgtacccagcagtgtaggctcagtgcagacaagtaccttccctgtggatagtataactggaccaactccgtgcagtctcgtcgtaccaatcggccgcgctggaaagactaaggaggttgcaacgggtttagcgatacccggacgtcaattccacaacacggcaatccctgaggattacgcaagggtacaggtcgccaaggtccatagcgaccacgtttccttggaactagacatacctgcacctgaggggattgaacttctcggtgatgcagtgaatcagtttatcttgtggcaccgcagagacataatcctgagcgcggccgttcttgcagcaggatcttcaaccccatcctcatcgcaggcaatgactgctgccgctcctgcaccaccgtcgcctcctgaaccaccgtcacctcgacatccgccgtcaccaccaccgcttaggtcaccgcctcgccaacctacaccaccaccctccccttctcaacaaccgcctctcccgaccccgcaaccagttcaagcctctcccacctccccaactaaacagcatgctcccccggctccgccctcagttcaaacctctccacctacaccccaatctgctctggtagaagaagtgcacataccagatggtactacatccgaaccaaagtctaatactttggaacctcgtcgtataattccaaagttgatatcgacatacgacccaaaggagattgacaaggataaggagaagttcatgttttcagctttcaggaattctgagaagagaaaagaacttgctcacgtcttgtcagactcccagaagtcagtactagcggcccaagatgaagtgcaatcctggttatctgccgatgtgcctgaaacttatgagtatggcaagccattcttgccaacttatcttatgaacaagctaccatgggaaatgagggtaatgcacgaatggtatatgaaggcatctaggaaaggtctcggtttcataagcgtcgccgtcccggaaggcgctttcatgagtggtcctaatgggatattttttatctctttccaagacctttacgccctctacaagctagataaaatggacgttaatctcgttgcggctttctgtcttatgcaattccacgaagctgatagaactggagcaaaggttggatacgtcgatccaacaagaatatgcaaaacacaacacaccatagagctgagacaggactgcgagcaattggttggcaagaccccggaagaaaaggaagaatatgtgaagacattgcacaagaggaagaagctagaagtagcaacatacttggcaatagcaatgttggcgcacgccgacaaagatgtcttaatggtcccctaccagttcacagaccactacatattattccttgtatatccgaaagaccaattgatcatatcattggaccccgcacactatgacaaggagacatttatggaattcctcactattttgaatttagcacacaagtactaccgcaaaagaggtggaccagtacatattccatcccagaagaagttatccgtcaggactggctggccgatccccgaaatcccatatattgcacaacgattcaaccacactactatcttgaacgtggccgctgacctctgccgattcatccgtcgcgatgtctgcaacgcaagaggtgtcacgcctgagtcagcaagctttgccgatactggatatgaccccccgccaaaaaaatggaaagggatttgccaggttggcccatcgtttgaggccataagttgcaaccggaagtttatcggtgcacggtggtacatcgatgacgagattctaagtagcatatccgataacgaggttctttctcctagggatgtcgaaggccacggcacgcacacagcctcaacggctggcggcaacatcatccacaatgttagctttctggggctagctgcagggacagttcggggtggagcgccccgtgcacgattagccatatacaaggcctgttggtccggttatggctgctccggtgccaccgtgttgaaagccatggacgacgctgtctatgatggtgttgatgtcttatcactttctataggtggtacaaaagaagatgtgggaaccctacatgtcgtcgctaatggtatctcggttgtctacgctggtggaaacgatggtcccattgctcagacggtggagaaccaatcaccatggctagtaacggtcgctgcaaccaccattgatcggtccttgcctgtggttatcaccttgggaaacggcgaaaagttggtggcgcaatcctttgtcctcctggaaactgcaagtcagttcagtgagatacagaagtacacagacgaggaatgcaatgccaacaatattatgaacagcacggtgaaggggaaaatagccttctgcttcatgggagagatgttgaataataagcagcagacatcataccctgatgtcaccacggcagtggcagccaaaggaggcagagcaccggacattgctgcaccaggggtttcgattttagccgctgctcagattccatattacaaaggtgtttcctaccatttcgattctggaacatctatggcttgcccccatgtagctgggatcattgcggtgctcaagtccattcatccaaaatggtcacctgcggctctcaaatccgcaatcatgacaacaggctttgtttggaacgtagagatttgcgattatatatatttcgttcaacaatcggctcacttgattgaccttattggatttaaagaactagccaacaacttgtga</cdnaseq>

Protein Sequence

<aaseq>MSNEKVPSNAPIAPQEGNAPQNSGSNKHPGASSEETWRTPSDPF PMEITQVAPRDDDPDYIPIEQAMVVRRRSKRKAGRNRTEQEVEMDTATSAPERTETST SAGGSGKKRRGERSKNKLPKETYNVIALDQDGKPIEPPIVRSKFSNACGTLVRTRCPI NVKLWETVDDNIKTLLWNELQKYFVFPPGSEVRGRDYALKKMGDRWRQWKSDLNRDYV QKNLPPFTDYGHISQADWDTFVADRTTAEALALRKKMSELAKKNKYPHRLGSSGYAGH VDQWREIEQRFAAAGKPLLVDPMVERSKNWVWARSTGQVSDEGDILFETPDIEEVTTN LQQIVEKERSGQFVPRRERDQLTAALGTAEHSGRVRGLSSKTSWKVGFPQDAPSYKKR DKYKEQLSDKIYAQVKEHFYSLAAENPTAFPRLFPDSQQPTQSAQQTTNVPSSVGSVQ TSTFPVDSITGPTPCSLVVPIGRAGKTKEVATGLAIPGRQFHNTAIPEDYARVQVAKV HSDHVSLELDIPAPEGIELLGDAVNQFILWHRRDIILSAAVLAAGSSTPSSSQAMTAA APAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLPTPQPVQASPTSPTKQH APPAPPSVQTSPPTPQSALVEEVHIPDGTTSEPKSNTLEPRRIIPKLISTYDPKEIDK DKEKFMFSAFRNSEKRKELAHVLSDSQKSVLAAQDEVQSWLSADVPETYEYGKPFLPT YLMNKLPWEMRVMHEWYMKASRKGLGFISVAVPEGAFMSGPNGIFFISFQDLYALYKL DKMDVNLVAAFCLMQFHEADRTGAKVGYVDPTRICKTQHTIELRQDCEQLVGKTPEEK EEYVKTLHKRKKLEVATYLAIAMLAHADKDVLMVPYQFTDHYILFLVYPKDQLIISLD PAHYDKETFMEFLTILNLAHKYYRKRGGPVHIPSQKKLSVRTGWPIPEIPYIAQRFNH TTILNVAADLCRFIRRDVCNARGVTPESASFADTGYDPPPKKWKGICQVGPSFEAISC NRKFIGARWYIDDEILSSISDNEVLSPRDVEGHGTHTASTAGGNIIHNVSFLGLAAGT VRGGAPRARLAIYKACWSGYGCSGATVLKAMDDAVYDGVDVLSLSIGGTKEDVGTLHV VANGISVVYAGGNDGPIAQTVENQSPWLVTVAATTIDRSLPVVITLGNGEKLVAQSFV LLETASQFSEIQKYTDEECNANNIMNSTVKGKIAFCFMGEMLNNKQQTSYPDVTTAVA AKGGRAPDIAAPGVSILAAAQIPYYKGVSYHFDSGTSMACPHVAGIIAVLKSIHPKWS PAALKSAIMTTGFVWNVEICDYIYFVQQSAHLIDLIGFKELANNL</aaseq>

Gene Sequence

<dnaseqindica>1..198#289..2522#2608..2859#2940..3050#3140..3221#3496..3601#4342..4955#5084..5151#6047..6185#6654..6843#6879..6982#atgtcgaacgaaaaggttccatcgaacgcaccaatagcgcctcaagaaggtaacgctcctcaaaattccggtagcaataagcatccaggcgcttctagtgaagaaacgtggcgcacaccaagtgacccgtttccaatggaaataacacaagtcgccccccgcgatgatgatccggactacatacctatcgaacaggccgtaagtgatgaaaatcgttagccatgtattattccctaaatatgatgtgacatgaacctaatggtgtatagagttacctattctgtgcagatggtagtccgacgccgctcgaaacgtaaagccgggaggaacaggacagagcaagaagttgagatggacaccgctacgtctgcacctgaacgtacggagacatctacaagtgcaggcgggagtgggaaaaaaagacgtggtgagagaagcaagaataaattacccaaggaaacttacaacgtgattgctctcgatcaggatgggaagcccatcgagccaccgatagtgcggtccaagttcagcaacgcctgtggcactctagtcaggacgcgttgtcccattaatgtcaagttgtgggaaacagtggacgacaacatcaagacacttctctggaatgagttgcagaagtattttgtgttccctcctggatcagaggttagggggagagattacgcacttaaaaagatgggagatcgatggcgacagtggaagtccgatctaaatcgggattatgttcagaagaatctcccaccgtttacggattatggacatatatcgcaggctgactgggacacgtttgttgcggatcgtacaacagctgaagcattggctttgaggaaaaaaatgtccgagctcgcgaagaagaacaaatatccccatagattggggtcgagcggatacgctggtcacgtcgatcaatggcgggagatcgagcaaagatttgccgcggccggtaagcccctgctggtagaccccatggttgaacgtagcaagaactgggtttgggcgcgcagcacaggtcaagtctcggatgagggagacatactattcgagactccagacatagaagaagtgactactaatttgcagcagatagtcgagaaagaaagatcaggacagttcgtcccacggagggagagagatcagcttactgcggcgttggggacggctgaacactctggacgtgtaaggggtttgtcctcaaagacaagttggaaggtcgggtttccacaagacgcaccaagttataagaagagagacaaatacaaagaacaactatcggacaagatctatgcgcaagtgaaggaacacttctactcgttggcagctgaaaacccgacagcatttccaaggttattccctgatagccagcaacccacacaatccgcacagcaaacaactaatgtacccagcagtgtaggctcagtgcagacaagtaccttccctgtggatagtataactggaccaactccgtgcagtctcgtcgtaccaatcggccgcgctggaaagactaaggaggttgcaacgggtttagcgatacccggacgtcaattccacaacacggcaatccctgaggattacgcaagggtacaggtcgccaaggtccatagcgaccacgtttccttggaactagacatacctgcacctgaggggattgaacttctcggtgatgcagtgaatcagtttatcttgtggcaccgcagagacataatcctgagcgcggccgttcttgcagcaggatcttcaaccccatcctcatcgcaggcaatgactgctgccgctcctgcaccaccgtcgcctcctgaaccaccgtcacctcgacatccgccgtcaccaccaccgcttaggtcaccgcctcgccaacctacaccaccaccctccccttctcaacaaccgcctctcccgaccccgcaaccagttcaagcctctcccacctccccaactaaacagcatgctcccccggctccgccctcagttcaaacctctccacctacaccccaatctgctctggtagaagaagtgcacataccagatggtactacatccgaaccaaagtctaatactttggaacctcgtcgtataattccaaagttgatatcgacatacgacccaaaggagattgacaaggataaggagaagttcatgttttcagctttcaggaattctgagaagagaaaagaacttgctcacgtcttgtcagactcccagaagtcagtactagcggcccaagatgaagtgcaatcctggttatctgccgatgtgcctgaaacttatgagtatggcaagccattcttgccaacttatcttatgaacaagctaccatgggaaatgagggtaatgcacgaatggtatatgaaggcatctaggaaaggtctcggtttcataagcgtcgccgtcccggaaggcgctttcatgagtggtcctaatgggatattttttatctctttccaagacctttacgccctctacaagctagataaaatggacgttaatctcgttgcggctttctgtctgtaagtctaaactctttattacatgttgcacgtttcattcgaaacaactaaaccaaatctcatttcttctttattcattgtacagtatgcaattccacgaagctgatagaactggagcaaaggttggatacgtcgatccaacaagaatatgcaaaacacaacacaccatagagctgagacaggactgcgagcaattggttggcaagaccccggaagaaaaggaagaatatgtgaagacattgcacaagaggaagaagctagaagtagcaacatacttggcaatagcaatgttggcgcacgccgacaaagatgtcttaatggtcccctaccagttcacgtaagctctctcttctttttgtttaattaatttatcttcttcggaattttctgtctccaataagcctatcttatatgtagagaccactacatattattccttgtatatccgaaagaccaattgatcatatcattggaccccgcacactatgacaaggagacatttatggaattcctcactattttgaatttgtaagtgataaacatttcattactataaattgtttaggtcgatcaccagtcttctaactactaataaaacaattgtttccttcaaacagagcacacaagtactaccgcaaaagaggtggaccagtacatattccatcccagaagaagttatccgtcaggactggctggccggtactatcaaatttataccaatacaactaattatcgaatagtacatatatactaaatatatctactgagatcggtccccataattatatcgcagtgctacaaacaaccaccaggaaccaacttgtgtggttattacgtgtgcgagatgctcagagtaaatgggaggtacaaaacaaccagtaaccgagtaggtcatcgaactcttctctacaaagaaacccatctcgcacacacttctcactgagtaccgttttattttcctttctgtgtgcagatccccgaaatcccatatattgcacaacgattcaaccacactactatcttgaacgtggccgctgacctctgccgattcatccgtcgcgatgtctgcaacgcaagaggtctcttctacgacaaccagagtgaactcgcaatggacgacaaatttaaacctctcagagagtgggagaaagaacatatgcaataacatgtacactacttatacatatgatgaaaaaactgtgccacttgtattatatatttgtatgtaaattacaattgaattaatggttatgtattacatgtttgttactgcggcacttgtcttatcttatatgcttactactccgaaatacgataataaatccctcaataatttaatattaattacgaatcaccaaaatgctagaataaatattattttagctattcggaaattgaatttcgcatgcggtctacttaagacgcccgcatgcgaaaatagatcttcgcatgcggtcttcttaggtcgaccgcatgggaaaatatatcttcgcatgcggcttcttatatggaccgcatgcgaagatctattttcgcatgcggccgtcttaagtgaccgcatgcgaagatcaatcttcgcatgcggctgcgacggccgcatgcgcaaatggtgatctttgcagaccatttcgcgcatgcgggccggccaaccgcatgtgaagatcgattccgcccgtatgaaaaacgctttctgtagtagtgctctatcatcaccttaattaattgtacttttgaatgaaatagtcggtacatgcaacttgataactgtgatttatcaaataatatttagaattttaattaatttgctattttcttataggtgtcacgcctgagtcagcaagctttgccgatactggatatgaccccccgccaaaaaaatggaaagggatttgccaggttggcccatcgtttgaggccataagttgcaaccggaagtttatcggtgcacggtggtacatcgatgacgagattctaagtagcatatccgataacgaggttctttctcctagggatgtcgaaggccacggcacgcacacagcctcaacggctggcggcaacatcatccacaatgttagctttctggggctagctgcagggacagttcggggtggagcgccccgtgcacgattagccatatacaaggcctgttggtccggttatggctgctccggtgccaccgtgttgaaagccatggacgacgctgtctatgatggtgttgatgtcttatcactttctataggtggtacaaaagaagatgtgggaaccctacatgtcgtcgctaatggtatctcggttgtctacgctggtggaaacgatggtcccattgctcagacggtggagaaccaatcaccatggctagtaacggtcgctgcaaccaccattgatcggtccttgcctgtggttatcaccttgggaaacggcgaaaagttggtggtatgtttgtattaattagataaataatatatatgtgtccgacgatataatgccagctgtttgcaatttgtttatcgatcatgcattaatttgattatctccatctcatctctgacgacacttcgcaggcgcaatcctttgtcctcctggaaactgcaagtcagttcagtgagatacagaagtacacagacgaggagtaagtgtagtagctaggaaatcaatactaattaccatatgattcaatacatatacatttttttcaattaagataatagaaaaattctggcctttacctagaagtaagctcaagtcaaattgttatttcgtacccctccgttttataatttcatattataagttgtttctaatcaaagttttataagtttataaccaaatttacaaaaattgatatagtaatattttaaatataaaacaaacatattattaaaatatattcaatgttaaatttaatgaaactaatttagagttgtagatgttgctaatttttttataaatttggtcaaacttaaagatgtttgaataagaaaaaaaagttaaacgacttataatacgaaatggaggtagcgagtagcacatatatatgtcataatttggatggcaagatattgctaagagcaaatcctattgcgaaatcttcatccataattgacaaagagctatgtaaccatcatctctatataaagacatgcgtacttcatcttatcgtttgtccttctcaagtagtaaactttagtggaatcagccatatacaaaataatactacctccgttttataaatagatgatgccgttgactttttctcacatgtttgaccattcgtcttatttaaaaaatttacgtaattataatttattttgttatgagttgttttatcactcatagtactttaagtgtgatttatatcttatacatttgcataaaatttttgaataagacgaatggcctaacatgtgagaaaaagttaacggcgttatctatttaaaaaacagagatagtatatcatatataaaaacatcatgtactagctaggtagtgtataaaatgatttgctgctgctgctgctgctgcagatgcaatgccaacaatattatgaacagcacggtgaaggggaaaatagccttctgcttcatgggagagatgttgaataataagcagcagacatcataccctgatgtcaccacggcagtggcagccaaaggaggcagagcagtcatcttgccgctgttctacaccgaaacaattctccaagatgatcccatcatcactgatttggatattccgtttttttatatctttttttttgcaattttatggaacttaaatggtattcatacacacaattatcaaggagttaaggattggtattgtcattttacagttttattttctttaaggtgggaattcctagatttttctaattagtgtataatttctctcttctaccttctagaaataaataaggtggtaacttaattttagaaggatctgcaactagtacaaataaataaagaaaggcaatttcctaatagatggagtactctatttcagatgcattaatttttttcttttgcaagaaaatttaattaacaatttcttcaatcaacaagaatgttttcacctgttttctcatcagacaatgttctgttaacataacacggcattctcccaaatttgcagccggacattgctgcaccaggggtttcgattttagccgctgctcagattccatattacaaaggtgtttcctaccatttcgattctggaacatctatggcttgcccccatgtagctgggatcattgcggtgctcaagtccattcatccaaaatggtcacctgcggctctcaaatccgcaatcatgacaacaggtaattaattatctcttttttttttataacaaaaggctttgtttggaacgtagagatttgcgattatatatatttcgttcaacaatcggctcacttgattgaccttattggatttaaagaactagccaacaacttgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0120000, RefSeq:Os04g0120000