Os04g0121100

From RiceWiki
Revision as of 10:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0121100| Description = Peptidase S8 and S53, subtilisin, kexin, sedolisin domain containing protein| Version = NM_001058606.1 GI:115456941 G...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0121100

Description

Peptidase S8 and S53, subtilisin, kexin, sedolisin domain containing protein

Version

NM_001058606.1 GI:115456941 GeneID:4334975

Length

5969 bp

Definition

Oryza sativa Japonica Group Os04g0121100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1241288..1247256

Sequence Coding Region

1241288..1241368,1242874..1242904,1243046..1243659,1243773..1243843,1244280..1244525
,1245314..1245440,1246040..1246232,1246703..1247256

Expression

GEO Profiles:Os04g0121100

Genome Context

<gbrowseImage1> name=NC_008397:1241288..1247256 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1241288..1247256 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttgcggtcgccgccaccactgccagatcaactgggacaaccgccgccctcaccggttccgcccgccagggccaccccaaatggactcaactgtagagacagtggtggtatcacgcctgagtcaccaagcttcgctgatgatggatatggtccccctccatccaaatggaaaggaatttgccaagtcggtccctcgttcgaagccaaaagttgcaaccgaaaacttatcggtgcacggtggtatatcgatgacgatactctaagcagcatgagcaagaatgaaattctatctcctagggacgtggaaggccacggcacgcacacggcctcgacagccggtggcaacatcgtccacaatgctagcattcttggtctagctactggaacagttcggggtggcgcgccccgtgcacgagtagccatgtacaagatttgttggtccggcagcggctgctccgctgccgtccagttgaaagccttggacgatgctgtctacgatggcgtcgatgtgttatcactttctcttggtagtccattggaagatctaggcaccttgcacgtcgttgccaaaggaatcccagttgtatactctgctgggaacgatggacccgttgctcagacagtggagaactcatcaccatggctgttaacggttgctgcagccaccatggatcgatccttccctgtggttatcaccttgggcgataatcataagtttgtggcacaatcctttgtcctttcacggcaaacgacaagtcagttcagtgagatacaagttttcgagcgtgacgactgcaatgccgacaatatcaacagcacagtgaaggggaagacggtcttctgcttcgggacaaagttggatccggagccagacatcaacagcatcatcaaggtgacgggtgagaaaggaggaacaggggtgatcatgccaaagtacaacaccgacacgctactgcaggacggccccctcactttgcctattccctttgtcgtagttgactacgagatcgcctacaggatataccagtactacaccaatgaaaatgatggcaccgcaaaagtgaagatatcattaacccaaacaacgattggaaaagtaactgcccctaaagtagcagctttctcatcgagggggcccagttctatctatcctggggttatcaagcctgatattgctgccgtaggtgttacgattttagcggctgccccaaagaatgttattgatttaggtatcccataccatttcgagtctggaacatcgatggcttgcccccatgtgagtggtatcgttgctatactcaaatcactgcatcctgaatggtcacctgctgccctcaaatccgcaatcatgactacagcacttacctatgacaacgatgggatgccgatacaagctaatggaagagttcaaaagattgcggatccttttgattatggagcagggtttattaatccgaatatggcagctgatccagggctcatctacgacatctctgcatccgattatctcaagttcttcaattgcatgggaggactaggctcaggggacaactgcaccacagtgaaaggatcacttgctgacctaaacctcccgtccatctccatccccaacctcaagacaatccaagtcgcgacacgcaccgtcactaacgttggccaggccaatgccgtgtacaaggcattcctccaaccccccgtcggcatcgagatggctgttgagccgccaatgttggtgttctctaaggatagaaaggtgcagagcttcaaggtgacctttaaagtgacgaggaggccaattcagggagactataggtttggaagcttggcttggcacgatggtggtaaccattgggttcggatccccattgcagttcgcatcgtgattgaagagatctactcaaagatctcctaa</cdnaseq>

Protein Sequence

<aaseq>MELRSPPPLPDQLGQPPPSPVPPARATPNGLNCRDSGGITPESP SFADDGYGPPPSKWKGICQVGPSFEAKSCNRKLIGARWYIDDDTLSSMSKNEILSPRD VEGHGTHTASTAGGNIVHNASILGLATGTVRGGAPRARVAMYKICWSGSGCSAAVQLK ALDDAVYDGVDVLSLSLGSPLEDLGTLHVVAKGIPVVYSAGNDGPVAQTVENSSPWLL TVAAATMDRSFPVVITLGDNHKFVAQSFVLSRQTTSQFSEIQVFERDDCNADNINSTV KGKTVFCFGTKLDPEPDINSIIKVTGEKGGTGVIMPKYNTDTLLQDGPLTLPIPFVVV DYEIAYRIYQYYTNENDGTAKVKISLTQTTIGKVTAPKVAAFSSRGPSSIYPGVIKPD IAAVGVTILAAAPKNVIDLGIPYHFESGTSMACPHVSGIVAILKSLHPEWSPAALKSA IMTTALTYDNDGMPIQANGRVQKIADPFDYGAGFINPNMAADPGLIYDISASDYLKFF NCMGGLGSGDNCTTVKGSLADLNLPSISIPNLKTIQVATRTVTNVGQANAVYKAFLQP PVGIEMAVEPPMLVFSKDRKVQSFKVTFKVTRRPIQGDYRFGSLAWHDGGNHWVRIPI AVRIVIEEIYSKIS</aaseq>

Gene Sequence

<dnaseqindica>1..81#1587..1617#1759..2372#2486..2556#2993..3238#4027..4153#4753..4945#5416..5969#atggagttgcggtcgccgccaccactgccagatcaactgggacaaccgccgccctcaccggttccgcccgccagggccaccgtgagtgttgtcgccaaaatcggcccccgccgatgagcgccgttgtcggcgctgaatccacctgcgaccgccatcgcaaccgtcatcgccgaagccgtgtccgctggcgaccgcctccaccgctactagaaccacccgcgaccgctaccaccctcactggatccactcgcatgagatggcatcgttgctaagcactgccctaccggatccaccccctagtagcatcgttgccgccggatctccccaccgaatctgggagcactgccgccgtcgcttgatcctctcgcgctagccactgccgtcgcctgctcctcttgcgtggaagagaatcggagggggatttgaggagatgaggaaaaaattcactggaagggaagggaaggggtagttgaggagtagtacaaatgttttatttaggtgggacccactctaatgccttctttgtcacacatacactgcagtaggtgctattatataaaggctggtcccacatgggccaaccatatgatacaagtgggtcttatacattgctcatgtcctaagactagagaatgagtggatgttattgtttttaagatagatcgaatgagtcctagttttgagttatctatttttataaatacctttaatcttagatctaatagaaaatactttgggtgttgtattttctacttaaactacttaaattatttcaaattgttctaatttaagtgcatgttattaatcagaaggtttaaaaatctatttgatttgttcttaaaaatgcatggatcggtgaacatagtagctagcccgtagaatatatatgacccaacgtaatgaatctctttagtaatatagttaatttggatcttaaatttaaaattttattatagtaaataatctaatggtgtgcaccaatacaaaaaaatagctaaatgattcagacaatatagttgtttaaaatgtgttatcataaaatattttttccatctaactaaaagaggaaaataggagagaaaggaagtaggtggggaggtacatactggatgggagggggtgggatatgcaggacttttttttgtttttatccttttcatttgataaataaatctaatgatagaaaataatgggtccaccttatattagtgaaaatcgactagattttttgtttattctcagaaattttgttatttttataatttattagaaatgtggtggtgtagaagcatttgtaggagtgtaattaggtggtggcttgagagcgttaatatgatgtttaatggatttttagtacataatagatagatgcaagctacttatgactgaagggagtaataatgtagaggttggatggtggagttgtcggttcctgactccattcatcttaaatactaactatttagtactcacgttaagcaaacacaaatggttcctagtattgttacagacgttagtatatttattcacaatccatatgtactagtttatatcgtgtgtctgtcatttgtattacgcttctgcagccaaatggactcaactgtagagacagtggtggtaaagtctattagtaattccccactctacatcatcactttaaccttacttttttgggttaactggttagcagaggtaaattaataatatgccttgtaaaataacatttagaatttcaatcaatatgctcttatcccgtaggtatcacgcctgagtcaccaagcttcgctgatgatggatatggtccccctccatccaaatggaaaggaatttgccaagtcggtccctcgttcgaagccaaaagttgcaaccgaaaacttatcggtgcacggtggtatatcgatgacgatactctaagcagcatgagcaagaatgaaattctatctcctagggacgtggaaggccacggcacgcacacggcctcgacagccggtggcaacatcgtccacaatgctagcattcttggtctagctactggaacagttcggggtggcgcgccccgtgcacgagtagccatgtacaagatttgttggtccggcagcggctgctccgctgccgtccagttgaaagccttggacgatgctgtctacgatggcgtcgatgtgttatcactttctcttggtagtccattggaagatctaggcaccttgcacgtcgttgccaaaggaatcccagttgtatactctgctgggaacgatggacccgttgctcagacagtggagaactcatcaccatggctgttaacggttgctgcagccaccatggatcgatccttccctgtggttatcaccttgggcgataatcataagtttgtggtatatatatattatgtgcagttcattcattctgacttaaattggatatatatcccagatgtgtgaacttaatgatctaatcaattttcactaatgtgtggtgattcttgcaggcacaatcctttgtcctttcacggcaaacgacaagtcagttcagtgagatacaagttttcgagcgtgacgagtaagtgtagtaaatcaaataactaaaatctaaagctagtaaggtaattaaaataagtgctagcgagctacctagcaccaactgatcagtatcatgtacaacggtgtctaataacgggctctcttcgttgtcatgcaagtaaatttgatgacgtggaagaaagagagggaaggaatgagaaacatcgttgctacgcatgacaatggctcagagtcgactcttagcatttattaacggaaaatttgttgcatgagagtgaagaaaaggaaagaagtataattaaaaatatatttagtgcattaatgatttagaaatctcattgtctctactattgtagaaggatagtctctagtgacattaattaacatagagagctcatattagactctacttttgtacatgtcctcataagtggtcatctgttcctgccctgcagctgcaatgccgacaatatcaacagcacagtgaaggggaagacggtcttctgcttcgggacaaagttggatccggagccagacatcaacagcatcatcaaggtgacgggtgagaaaggaggaacaggggtgatcatgccaaagtacaacaccgacacgctactgcaggacggccccctcactttgcctattccctttgtcgtagttgactacgagatcgcctacaggatataccagtactacaccaagtaggtggtaacttaattagagaaagaattaaactacatatatactgaatatatttttggatcattagattgattataccacattcttcttgagaaaatatactccatgccatcaagtttgcgctagttcaataatttacctttgactttctcttttttataatgtaccattgaactcatcaattccttctacaatatgccattggatcatttactttttcaaaaattaccccaaatacccttacgtataagaaacaattgattgactggatagaagttttaaaaagatatgaaattctttgtgtagtctccttacatgatatataagcagatttttttacattaaaaacaccaaacaaaaaatattctatgtaggatgtagcatataagttatattttataaaaactatagtgcaagaatcttggaatttatgtacaatttttttatgttgtgtaaggaggctaaaaaaatttgaaattttctaaatcttctaaatgattaatcaattgcaatcttatatatttgtattggcatttttgaaaaaagaacacttggcccaattgtatattgtagaattatggctaaactcaatggtatataatagaaagatacaatattaatgacatatcattgaaccgatgcaagcttaatggcataaagttgactttccttcttctaactatttagtttaggttgtgcacttgaataattaattgcctttacttctagccatgcactgattagcaatcattcttcttttttgtcaacaaatacaatacaataacagtgaaaatgatggcaccgcaaaagtgaagatatcattaacccaaacaacgattggaaaagtaactgcccctaaagtagcagctttctcatcgagggggcccagttctatctatcctggggttatcaaggtaaaattagttacagtatgtactgataattaatgaaggttcatatacagaattgcctgtactcaaggcaatcgacaaatactttatcacaacatctacgttcatattagggctcaataatgcatatttgtttttcttgaatctgaaaattaattaatatttgtcggaatcatatatattacgttcatttatagctcagtatatatagctaaaggcttcgacggacatgctaaagagagcagtcaaaacaatacaaatgtgtgcaaaattaagttgctgacaacataggcacataactttgctgatcaacatagttttctaaattctaacatcattatcttggaaaggctggctgctgcaagatcactatttgtagttcagctcaattaattaagacagaaataatgtaaaagtaagccagttttatttctcttaccagctaatattcgctaggaataaataactgtaggtatatatccaaatcagaactatcataattgttattaagaacaagttgattatgttattgtttgaactgttttcccattgctcacaatattctgtaatcataacatggatgacgttctctcaaattgcagcctgatattgctgccgtaggtgttacgattttagcggctgccccaaagaatgttattgatttaggtatcccataccatttcgagtctggaacatcgatggcttgcccccatgtgagtggtatcgttgctatactcaaatcactgcatcctgaatggtcacctgctgccctcaaatccgcaatcatgactacaggtaactatttttcttttcataaacaacagatttagtttggagaacacaacttaattttgcgctaatacttcatcattttaaatggaccttatttatttttggcggggaggagaactttgattggtcaatacccaaaagaatagtacattcaaactgcattaattgttgaatagtctcacattagttattgaaggacaagggacctaatatataagtggggagcccctcacctcattggctagtttttggtgaaaaggtctctctacgatccaacattaacttcattatcaatgaacttaaatgaccaaaccagagcaatatgttgctatcccagagcaaccagcacatgctaacggggtcaatactacattttgttttctgaaccgttagccttcttgcaagcaaatatatgcatttgatgtacagattgagttcgtaacgttctggtcattatatttcttcacatccagcacttacctatgacaacgatgggatgccgatacaagctaatggaagagttcaaaagattgcggatccttttgattatggagcagggtttattaatccgaatatggcagctgatccagggctcatctacgacatctctgcatccgattatctcaagttcttcaattgcatgggaggactaggctcaggggacaactgcaccacagtgaaaggatcacttgctgacctaaacctcccgtccatctccatccccaacctcaagacaatccaagtcgcgacacgcaccgtcactaacgttggccaggccaatgccgtgtacaaggcattcctccaaccccccgtcggcatcgagatggctgttgagccgccaatgttggtgttctctaaggatagaaaggtgcagagcttcaaggtgacctttaaagtgacgaggaggccaattcagggagactataggtttggaagcttggcttggcacgatggtggtaaccattgggttcggatccccattgcagttcgcatcgtgattgaagagatctactcaaagatctcctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0121100, RefSeq:Os04g0121100