Os04g0127200

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Revision as of 10:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0127200| Description = Similar to Subtilase| Version = NM_001058616.1 GI:115456961 GeneID:4334987| Length = 4716 bp| Definition = Oryza sa...")
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Gene Name

Os04g0127200

Description

Similar to Subtilase

Version

NM_001058616.1 GI:115456961 GeneID:4334987

Length

4716 bp

Definition

Oryza sativa Japonica Group Os04g0127200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1692689..1697404

Sequence Coding Region

1692988..1692994,1693335..1693490,1694503..1695122,1695251..1695315,1695408..1695810
,1696342..1696513,1696597..1697126

Expression

GEO Profiles:Os04g0127200

Genome Context

<gbrowseImage1> name=NC_008397:1692689..1697404 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1692689..1697404 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gacatagagcttcctgaggtacacagcataagaccaagcattttgcatccgttgcatacaactcgtagccaggatttcctcggattggactacacccaatcagctggtttactgcatgatacaaactatggagacagcgtcatcattggaattatcgattcaggtatctggccggagtctccaagcttcaaagatgatggtctaggtcctttgccttccaagtggaagggcaaatgtctagccggccaagcatttggttctaaccaatgcaaccgaaagataattggggctcgatggtatgacaaacatttgaatccagacaatcttaaaggtcagtacaagtcagctagggatgctgatggacatgggacacacgtcgcgtccacagcggctggtgttctggtgccaaacgttagcttccatgggctagctgttgggtatgccagaggtgctgcaccacgtgcacgtcttgcagtttacaaggcgtgctggggatcgccgccaagctgtgatactgcggccgtcttgcaagcgtttgacgatgccatacatgatggtgtcgatgtgctgtccctttctattggtgcaccgggccttgagtatcctgctagcctccaggctgtcaagaatggcatatcagtcatcttttctgcagggaatgaaggtcctgcacccaggactgttaagaatgcatccccctgggccatgtcggtagcatcggccacaatagaccgtgctttccccactgttatcacactttccgacagcaccagtagctttgtgggtcaatctttgttctatgatacagatgataagattgacaactggtatgaagtctatcagtctagctgcctttttgggactccggaaacgtcaaatgtaactcttgctgtggggaagattgtgctttgcaacagtcctaactctgtgagcctaatttcaccaacaattcaaccggtttggaacattttgcttgctgtaaatgctttgaaggaggctggagcaaagggaattatttttgccgcatatgcttttgatatattggacgttgttgaaagttgtggcagcatgccttgtgttttggtggactttgaagttgcacaacagataaaacaatctgctgatgaaaacaccgcactggtagttaaggtggctgcagctcagacttggattggaggtgaagtgctcgctccgaaaatctcagccttctcctccagaggacctagcccactttatccagaattcctcaagcctgacattgcggcgccaggatctaacatcttggcagcagtccaagactcatacaagttcatgtcgggaacttcgatggcatgcccacatgtgtcaggtgtagttgcattgctcaaagcattgcatccggattggtctcctgctattatcaaatcagcactggtgactacagccagcaacgaaaaatatggtgtcccaatattagctgatgggcttccccaaaagatagcagatccatttgactatggtggtggcttcattgatccaaacagagccgttgatcctggcctagcatatgatgttgacccaaacgactacaccttactccttgattgtatttctgctgccaactcaagctgtgagtttgaacccataaatatgaaccttccatcaattgcaattcctaatctaaaagaaccaacaactgtgctgagaacagtaacaaatgttggccaagctgatgcagtttacaaggctgttgtgaaatcacctcccggtatgaagatatcagtggagccatctgttctacaattcagccagagcaaaaagaagcagagctttaaggtcattttcagcatgacccgcaaatttcaagggggctacctatttgggagcctagcatggtatgatggaggcactcactatgtcaggattccaattgcggttcgaccaatagtatccgataattatgcagatctctga</cdnaseq>

Protein Sequence

<aaseq>DIELPEVHSIRPSILHPLHTTRSQDFLGLDYTQSAGLLHDTNYG DSVIIGIIDSGIWPESPSFKDDGLGPLPSKWKGKCLAGQAFGSNQCNRKIIGARWYDK HLNPDNLKGQYKSARDADGHGTHVASTAAGVLVPNVSFHGLAVGYARGAAPRARLAVY KACWGSPPSCDTAAVLQAFDDAIHDGVDVLSLSIGAPGLEYPASLQAVKNGISVIFSA GNEGPAPRTVKNASPWAMSVASATIDRAFPTVITLSDSTSSFVGQSLFYDTDDKIDNW YEVYQSSCLFGTPETSNVTLAVGKIVLCNSPNSVSLISPTIQPVWNILLAVNALKEAG AKGIIFAAYAFDILDVVESCGSMPCVLVDFEVAQQIKQSADENTALVVKVAAAQTWIG GEVLAPKISAFSSRGPSPLYPEFLKPDIAAPGSNILAAVQDSYKFMSGTSMACPHVSG VVALLKALHPDWSPAIIKSALVTTASNEKYGVPILADGLPQKIADPFDYGGGFIDPNR AVDPGLAYDVDPNDYTLLLDCISAANSSCEFEPINMNLPSIAIPNLKEPTTVLRTVTN VGQADAVYKAVVKSPPGMKISVEPSVLQFSQSKKKQSFKVIFSMTRKFQGGYLFGSLA WYDGGTHYVRIPIAVRPIVSDNYADL</aaseq>

Gene Sequence

<dnaseqindica>300..306#647..802#1815..2434#2563..2627#2720..3122#3654..3825#3909..4438#ggactgctgtcccagctccaaatccttgctaggtcaggaccggatctgtagcgagcggtcgcgcgggcatggtttcccccttcgtgccttgcctgtgaccgcggtccgccgaatcccagctctggccgtccatcggccactcgcctggactggatggtgcgacggcgctctccagggatcaacgcccctcgcggaaccgcagattgtttgcttggtctgctacttgagttcttagttccttttcatttgttgcgatgctggtccatgcacaccaactgctcgatgcattgcccaaataggacataggtaaggtattatccactgattgccgtgctctgttttctgtatcctgttgctagttttggatcctcttaacatgtttgactgactccataaacagcctcagcatgccaaaagtgcttctggacaaatattatgcatagttcagtaaattcttgcaattatatatgtgtttaattattatataggtggcttatagcaggtgctatatatccatcttatttggtggctatgaacgttatgagaaataaaagctcagcctgtagagaatagcatgatcatcctatcgacatgctgattcttggcacagttttcagtctaatgtttcatttcaatgcatgtacagagcttcctgaggtacacagcataagaccaagcattttgcatccgttgcatacaactcgtagccaggatttcctcggattggactacacccaatcagctggtttactgcatgatacaaactatggagacagcgtcatcattggaattatcgattcaggtaactacacttcctcatgtttgatatgtattccatcaggttctatacactagctaaatacattttaacagtaacacactgttcctgcctgggtacatatcattatggaagtgaatgtcaaatcaaatatgaaatatgtaagactgatccatttgtaaagaaagtacctgcatttcaacatatgcatatggctgacgcaaaattatttcaattatccagtgctccctctgtgcacttttgtagggagcattttgatttggcatggtctaaatatctagaaagaaatttaacttagaaatctattagtataagttttgtgcactataaacttgtattatttgttattcgtcaaaacttatggtgtttgaattaattaaatacatactattgggttgcatgcaccgaccatttcaacccaaaagcttaagctgatgaggaaaagtgggcaattcactttatattctaacactccccctaacgcgaggccccctcaagcctctaacgtggaataagaagtgggcagcaatttttatttaattgcgtgctagccaagattcgaactcgagacctctggctcttataccatattgaattacatgcaccgaccatttcaacccaaaagcttaagctgatgaggaaaagtgagcaattcactttatattccaacacatacatgccttgtataagtggatagatggagtattgatacttttataccacttttcacatgtggtttataacactggtgagtcaatttatatcactagaactttattatgtgtattgtgttcaaatttaatttcattcttgattttttttcctaaaagctacatattggtattgtatttcaaacattttgtttataaacaacgatgtgaaatccaaaaatccaaaatggctgtatttgtaacttgaggaaactgctaggctgcacatccaagggggttaaaattttggcagatatataatcacaatgaaggttattcctgttattgtcccctatatatgtcaggtatctggccggagtctccaagcttcaaagatgatggtctaggtcctttgccttccaagtggaagggcaaatgtctagccggccaagcatttggttctaaccaatgcaaccgaaagataattggggctcgatggtatgacaaacatttgaatccagacaatcttaaaggtcagtacaagtcagctagggatgctgatggacatgggacacacgtcgcgtccacagcggctggtgttctggtgccaaacgttagcttccatgggctagctgttgggtatgccagaggtgctgcaccacgtgcacgtcttgcagtttacaaggcgtgctggggatcgccgccaagctgtgatactgcggccgtcttgcaagcgtttgacgatgccatacatgatggtgtcgatgtgctgtccctttctattggtgcaccgggccttgagtatcctgctagcctccaggctgtcaagaatggcatatcagtcatcttttctgcagggaatgaaggtcctgcacccaggactgttaagaatgcatccccctgggccatgtcggtagcatcggccacaatagaccgtgctttccccactgttatcacactttccgacagcaccagtagctttgtggtatgttgatttcctcctttctattgttcatttcaagtatataggttcttgggtgcatgcatgtataaatgtacacaagccgtaacttctggatgcatgatgcctcactcactccttaatcgtcccagggtcaatctttgttctatgatacagatgataagattgacaactggtatgaagtctatcagtctaggtatggccaaacaattaacaagccataacacgccctatgctttgatgtttttatatgctttcatggttgaattataatgtttgtgcatgcagctgcctttttgggactccggaaacgtcaaatgtaactcttgctgtggggaagattgtgctttgcaacagtcctaactctgtgagcctaatttcaccaacaattcaaccggtttggaacattttgcttgctgtaaatgctttgaaggaggctggagcaaagggaattatttttgccgcatatgcttttgatatattggacgttgttgaaagttgtggcagcatgccttgtgttttggtggactttgaagttgcacaacagataaaacaatctgctgatgaaaacaccgcactggtagttaaggtggctgcagctcagacttggattggaggtgaagtgctcgctccgaaaatctcagccttctcctccagaggacctagcccactttatccagaattcctcaaggtgcatgcatactgagtttgatccattcccaggagtagtacattaatataaatataatttctctttcacctaattaattaactatgctatattgtatttttattacactattctaactaatattgtatctataacttctttggagcgtttattagcgcataaaaaatcgatgggctagcaacattgatttagcatttcaaccaaatacagttaggaagaactatcatagtatgttctcaccactgagcctgtaaaacaagtaactgaaaaacggaaattaaggaagcgcataagtgtcaggaggtaaaataattgagaaactgaaaatatagtaagatctctttcagagcacatactctatacaaggcctgagaagagcataccgataagagccagtaaattctgtcaaggtggtcagtttaatcacatatacatattttcccttttgtgacttaggactttataagttcattcaattatttatcctctgttggctctccttgcctcacataaactttcgtgttccaatagcctgacattgcggcgccaggatctaacatcttggcagcagtccaagactcatacaagttcatgtcgggaacttcgatggcatgcccacatgtgtcaggtgtagttgcattgctcaaagcattgcatccggattggtctcctgctattatcaaatcagcactggtgactacaggtgatttatattcctagaaaatacttctcaagcatataatatatcactgatttattttccttaccttcaacatggttctccagccagcaacgaaaaatatggtgtcccaatattagctgatgggcttccccaaaagatagcagatccatttgactatggtggtggcttcattgatccaaacagagccgttgatcctggcctagcatatgatgttgacccaaacgactacaccttactccttgattgtatttctgctgccaactcaagctgtgagtttgaacccataaatatgaaccttccatcaattgcaattcctaatctaaaagaaccaacaactgtgctgagaacagtaacaaatgttggccaagctgatgcagtttacaaggctgttgtgaaatcacctcccggtatgaagatatcagtggagccatctgttctacaattcagccagagcaaaaagaagcagagctttaaggtcattttcagcatgacccgcaaatttcaagggggctacctatttgggagcctagcatggtatgatggaggcactcactatgtcaggattccaattgcggttcgaccaatagtatccgataattatgcagatctctgaagaagcatagaactacagaatgttcatacttcaaaaggttctgtggagcaggcctcatcctatattatcccctcaaagttgagtttgtcagcctcaccaaaactgttgtactactttacatgttttgtttttctgtctgtaatttgtgatttcactacactatatgatacctcctatcatatggacagaggtccgaaaaaataatggaataaacgagggatatacctgtgtgtactcgttaaccccgctaaaagagatggagggcattggctcctctc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0127200, RefSeq:Os04g0127200