Os09g0563700

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0563700| Description = Conserved hypothetical protein| Version = NM_001070475.1 GI:115480692 GeneID:4347864| Length = 4177 bp| Definition ...")
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Gene Name

Os09g0563700

Description

Conserved hypothetical protein

Version

NM_001070475.1 GI:115480692 GeneID:4347864

Length

4177 bp

Definition

Oryza sativa Japonica Group Os09g0563700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23231827..23236003

Sequence Coding Region

23232781..23233065,23233716..23233832,23233921..23235651

Expression

GEO Profiles:Os09g0563700

Genome Context

<gbrowseImage1> name=NC_008402:23231827..23236003 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23231827..23236003 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcaggagctagtcaaacgctcctttagagaggatgcttcaatggcaggtgccatcttcatgtccaacaccgccacaagggagctgtgcttccgttccaacatctttggacttcccatagagtaccaaccttttgtgcggaatatcagacaaggaatgcctttgtttctgtttgatcatactgaacgcaaactctatggggtctttgaggctacctctgatggtggattcaatattatcagatctgccttttcgtcgattggatgctcatatcctgcacaggtctgcttcaaaattatttggaagtgcagaccactcaccgaagatgagttttcacctgccataaaagagaactactatatgccatggaagttctactttgacctttcctaccaacaggttgtctgcttatatcagttatttgatgagaagagggttgaacatcctattcacaaccattcaaagagtgctaatttggaaaatgatccctttaggaaagggacacaagaaagaaagagcttgagtccaaatattcctcattttcctgctgatcagccaggtctttttatgcctgcgagtacccccagattttcaacagttgaagcaagctactgtgcatccacaagcatgcaccaagcaccacatcccaatatgtcaatgcccctgggaactaatccttttggagttcaaattgcacctgtccacaacagccatcacgaccaagcagaactaccttacaacaataacatgctttttcctggatacttgccttctggacatgtagctcgggacacaactcaggaacttgggctttctgcaaatcactcatatcctccatctatgggctatgcatacggttgcttgccgcctcctggacatagacctcaggatgcaattgcaggagatgtaaactatgcccctccatatcctcaatttcctctgccaaatgaacaaggcagtgctactaacaggagagattattatgatgtccactgcaaacaatgccagtttgaagatatttatgaatcggagcatcagcacttcagcaaagcaaaagtcttagcacctccaatattaaaccaacaagatgttccagtataccctgcaattgctgaatcagcatttgatcagcggaaagaatgtttcactgaagaagactctgagaatgctcgacagaaacaaagttttaatcacactgatatggtgttttctggtcttggaaatagcaatagagcctacatgccagaccatctaaacaaaaatcctgatataagatctgaaagcaacacaatagctgttggtcagcatgcacaaagcagtgtgttttctcgcttatcacggatcccaccaccactgcatcaagaaattcctggtccttcgctcaacaagttggttctctcactttctcagagagcagaacattggggtaaccaggataaaataatcaccaatgatgtttgtgaacagttggtcagtgagcaagtaatggatacaccctatcctcttgctgagttgaaccagcaaagcggcttaattgaagaagaaattgaagggcttgcattcatgaactttaagagacgcagcgaaacaaggaacttggatgcaaatctaggaaaggaaattagggggcaagtgaagagaagaaagcttgttcgcccttcctttggagaagttaacaatgctggtagttctggaaaagagcttgaagctaaagtcttagagggagaaaaacatagcaatgatgaacatgatgaaaacaagttcagtattgacctaaataaacctgctgccatagatggtgatgtagcaaaggaggatgataccaccaccgcattgccacatccttctgttgcgatcaagatgcataaagagaaaccatctgaagaaaacatgagcaagccaaacagcccaaatacgacggaagagatgaaaaaacaagatccatcccttgacagcgccacgcatactgaaaagatttcacttgaattagatgttgcggatttgaatacaattgaccagtccaaactgcaagcaattctcagctcatctctgttgcaagcacttgacaagctcagaagagagaagctcaacaactctgaagaggctgaagaggtaaagatagcaacttga</cdnaseq>

Protein Sequence

<aaseq>MRQELVKRSFREDASMAGAIFMSNTATRELCFRSNIFGLPIEYQ PFVRNIRQGMPLFLFDHTERKLYGVFEATSDGGFNIIRSAFSSIGCSYPAQVCFKIIW KCRPLTEDEFSPAIKENYYMPWKFYFDLSYQQVVCLYQLFDEKRVEHPIHNHSKSANL ENDPFRKGTQERKSLSPNIPHFPADQPGLFMPASTPRFSTVEASYCASTSMHQAPHPN MSMPLGTNPFGVQIAPVHNSHHDQAELPYNNNMLFPGYLPSGHVARDTTQELGLSANH SYPPSMGYAYGCLPPPGHRPQDAIAGDVNYAPPYPQFPLPNEQGSATNRRDYYDVHCK QCQFEDIYESEHQHFSKAKVLAPPILNQQDVPVYPAIAESAFDQRKECFTEEDSENAR QKQSFNHTDMVFSGLGNSNRAYMPDHLNKNPDIRSESNTIAVGQHAQSSVFSRLSRIP PPLHQEIPGPSLNKLVLSLSQRAEHWGNQDKIITNDVCEQLVSEQVMDTPYPLAELNQ QSGLIEEEIEGLAFMNFKRRSETRNLDANLGKEIRGQVKRRKLVRPSFGEVNNAGSSG KELEAKVLEGEKHSNDEHDENKFSIDLNKPAAIDGDVAKEDDTTTALPHPSVAIKMHK EKPSEENMSKPNSPNTTEEMKKQDPSLDSATHTEKISLELDVADLNTIDQSKLQAILS SSLLQALDKLRREKLNNSEEAEEVKIAT</aaseq>

Gene Sequence

<dnaseqindica>955..1239#1890..2006#2095..3825#agggaggaggagatcaatcggcaagccaaaaaacaaaaaaagatttcttttcttttcttttcctcctgttgctcgtcgacgcgccgccgccgccgccgccgccgcctcctccatcgccatcaactctcccggccggccgtcttcttcctccgctcccttttggtatttctcgttgcggtatctttttatcccctactgttgctacttcgctacttcgctttctcctgctgttcatcgcgtcgcagtcgctggtactcctaaatctgtttctttttctttcttttttctttttttttttgctaatggagtacggtattcaatctgttcctagatgatttgtacggttcgatactctgatggtttgctttttagattggtttactgtaactgatcttctccggttgttcctttccaacttatgtgctactcatgaggctaaccgacctgattgcaacatctcccttaatctcctatacatcaggggtttttctcttgtgtgtattttttctcctgtgtgtattttttctcttgtatgtactgcatcagagaactctagtctagtaaaaaataagttctatctttcgacgttattgggggcaatttaattggttcatccatgcattccatgcgagtttttttttcttacaagtcactgtttggtcatcctgtttgactcccttgttccacctttctcgctctttatccagttattttttcttgctttctcctattctttcatcgtgggttattaagtattaacttaactgaactctaccttcactttcagaacttgctttcaagcattgtatgtgataaccaactcaataactctgtactctaatgtatgaattgtttgccatgaactgacatacatgattctatccatgtaactactaaccaatcacaatttatttatttctaattatttctcctgtgcatatgttcaaggtctgaatgaggcaggagctagtcaaacgctcctttagagaggatgcttcaatggcaggtgccatcttcatgtccaacaccgccacaagggagctgtgcttccgttccaacatctttggacttcccatagagtaccaaccttttgtgcggaatatcagacaaggaatgcctttgtttctgtttgatcatactgaacgcaaactctatggggtctttgaggctacctctgatggtggattcaatattatcagatctgccttttcgtcgattggatgctcatatcctgcacaggtaaactgtagctaatatatgcgtcttgatcaattaatcatgctacggtctgttgatgatcggctaccctttggcttagaaagcctgacaagtgattatttggatatcttttaacaacatggaccttgtcaatttaatctttccagaacatataatgcctagtttgtcgctgctttatcactaaattttatgataattgataccccaaatgcaaccatttgttcttggccttttagtgttctaggtgatctgtcatgtggaattgtaagctacggcatgcaaagaaatggattgagtttctctatggttatagtgctgttagtgtgtgccataaaatggttaaagtttaaaagtcctcataatttagatggttacttcacttctttttttctgtgtatacaattgtaagtgtggacattttctgttgataaactgcatttactactagataatcattaaagcatatactatcacattatgatggattggtgcttacagaatgacatgataaacaatagaatggggaactttatgtacgagttgatctttggatacttccatttgtctttttggtatttgaagccacttactggttataagtactatgctcaaaattattcattcagttttgagctgtcattttcccctaggtctgcttcaaaattatttggaagtgcagaccactcaccgaagatgagttttcacctgccataaaagagaactactatatgccatggaagttctactttgacctttcctaccaacaggtatgctgtaattaacaaaacttgatgggtgaacttccatgagcctgatgataggctatacttatgcaatcttgattgatacttgcaggttgtctgcttatatcagttatttgatgagaagagggttgaacatcctattcacaaccattcaaagagtgctaatttggaaaatgatccctttaggaaagggacacaagaaagaaagagcttgagtccaaatattcctcattttcctgctgatcagccaggtctttttatgcctgcgagtacccccagattttcaacagttgaagcaagctactgtgcatccacaagcatgcaccaagcaccacatcccaatatgtcaatgcccctgggaactaatccttttggagttcaaattgcacctgtccacaacagccatcacgaccaagcagaactaccttacaacaataacatgctttttcctggatacttgccttctggacatgtagctcgggacacaactcaggaacttgggctttctgcaaatcactcatatcctccatctatgggctatgcatacggttgcttgccgcctcctggacatagacctcaggatgcaattgcaggagatgtaaactatgcccctccatatcctcaatttcctctgccaaatgaacaaggcagtgctactaacaggagagattattatgatgtccactgcaaacaatgccagtttgaagatatttatgaatcggagcatcagcacttcagcaaagcaaaagtcttagcacctccaatattaaaccaacaagatgttccagtataccctgcaattgctgaatcagcatttgatcagcggaaagaatgtttcactgaagaagactctgagaatgctcgacagaaacaaagttttaatcacactgatatggtgttttctggtcttggaaatagcaatagagcctacatgccagaccatctaaacaaaaatcctgatataagatctgaaagcaacacaatagctgttggtcagcatgcacaaagcagtgtgttttctcgcttatcacggatcccaccaccactgcatcaagaaattcctggtccttcgctcaacaagttggttctctcactttctcagagagcagaacattggggtaaccaggataaaataatcaccaatgatgtttgtgaacagttggtcagtgagcaagtaatggatacaccctatcctcttgctgagttgaaccagcaaagcggcttaattgaagaagaaattgaagggcttgcattcatgaactttaagagacgcagcgaaacaaggaacttggatgcaaatctaggaaaggaaattagggggcaagtgaagagaagaaagcttgttcgcccttcctttggagaagttaacaatgctggtagttctggaaaagagcttgaagctaaagtcttagagggagaaaaacatagcaatgatgaacatgatgaaaacaagttcagtattgacctaaataaacctgctgccatagatggtgatgtagcaaaggaggatgataccaccaccgcattgccacatccttctgttgcgatcaagatgcataaagagaaaccatctgaagaaaacatgagcaagccaaacagcccaaatacgacggaagagatgaaaaaacaagatccatcccttgacagcgccacgcatactgaaaagatttcacttgaattagatgttgcggatttgaatacaattgaccagtccaaactgcaagcaattctcagctcatctctgttgcaagcacttgacaagctcagaagagagaagctcaacaactctgaagaggctgaagaggtaaagatagcaacttgactgtttccatgaactctgaaggagatgcaaagcctacatgcagttgattttagtacgtagtaccaaccaatactacttcagcagtactggagcagaatgactacaaggcatggttaagcaccaagtatcatgtgatgtagtataggaacaatagctaccttttctcatgtagtagtaccattgctattttgtgttatcctataaaactaactaatattctcggggaagtacggctctctcacgctgctctgccacgtagatctgtgtgatctgtcatgtggaattgtaaagcttctgcgtgcaaagaaatggattgagtttctctatagttatagtgctgttagtgcgtgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0563700, RefSeq:Os09g0563700