Os04g0129200

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Revision as of 10:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0129200| Description = 3'-5' exonuclease domain containing protein| Version = NM_001058624.1 GI:115456977 GeneID:4334995| Length = 2314 bp|...")
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Gene Name

Os04g0129200

Description

3'-5' exonuclease domain containing protein

Version

NM_001058624.1 GI:115456977 GeneID:4334995

Length

2314 bp

Definition

Oryza sativa Japonica Group Os04g0129200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1824390..1826703

Sequence Coding Region

1824390..1824452,1824532..1824642,1825329..1825490,1825594..1825724,1825900..1826076
,1826451..1826703

Expression

GEO Profiles:Os04g0129200

Genome Context

<gbrowseImage1> name=NC_008397:1824390..1826703 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1824390..1826703 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaactccggcgagcctcctgcctcgtcctccctcggcaatgccggagaggaggaggaggaggacgacttctactgggacgccgaggcggaggccgagctgcaggccatcgaggccgcctacgccgccgccaagcgccgccgcctccccgactggccaagccccaacccggtcaccgcatccgcatccgcatccgcatccgggggttgttcccccgcgccgccatgggctccctctcctcccgctttccgaggtaatgtgaaggcaaggtaccaaccagtaatgttcaatggcagcatagtgtactgcaggaccccttcagaagtggagaaagccacaagggacattttatgcaaaattgaaaccatgaaggcctctggccaggtttctcttggattcgatctcgagtggaggccctttccgagaagaggagatccaccatgtaaagttgctgtaatgcagttatgcatggagagaactcgttgttatgtcatgcacatcattcactccggagtgccacctgtactaaagtctcttttggaggatagttcgtccgttaaagttggaatatgtatagataatgacgcaaggaaaatgttcaatgactatgatgtccatgtacagccattgatggatctgtcaaatcttgctaatgccaagttaggtttccctcctaaaagatggagtcttgcttcattaactgaaatggtcacatgtagagagttgccgaagccaagcaacataagaatgggaaactgggaggcatatgttctctcaaagcaacaacttcagtatgctgctacagatgcctacatatcttggcacttgtatgaggtactgcagagtctcccagacaataatgttgaggttgaaaaggagacaattacagcagcatag</cdnaseq>

Protein Sequence

<aaseq>MNSGEPPASSSLGNAGEEEEEDDFYWDAEAEAELQAIEAAYAAA KRRRLPDWPSPNPVTASASASASGGCSPAPPWAPSPPAFRGNVKARYQPVMFNGSIVY CRTPSEVEKATRDILCKIETMKASGQVSLGFDLEWRPFPRRGDPPCKVAVMQLCMERT RCYVMHIIHSGVPPVLKSLLEDSSSVKVGICIDNDARKMFNDYDVHVQPLMDLSNLAN AKLGFPPKRWSLASLTEMVTCRELPKPSNIRMGNWEAYVLSKQQLQYAATDAYISWHL YEVLQSLPDNNVEVEKETITAA</aaseq>

Gene Sequence

<dnaseqindica>2252..2314#2062..2172#1214..1375#980..1110#628..804#1..253#atgaactccggcgagcctcctgcctcgtcctccctcggcaatgccggagaggaggaggaggaggacgacttctactgggacgccgaggcggaggccgagctgcaggccatcgaggccgcctacgccgccgccaagcgccgccgcctccccgactggccaagccccaacccggtcaccgcatccgcatccgcatccgcatccgggggttgttcccccgcgccgccatgggctccctctcctcccgctttccgaggtgctcttcttggctttcccccctttctttgacatgatatgacgtttaatttaaagaatccctttttattcctggagctggatcgatttcatgtctctcgcatcagttcttttagggtcatagggattaatgtttcttggtagtacaacatatgcatcgttggggggtaaatttctcaattttgctgaaatgaaatgccagctccgtgtaacatttccttctcctgaggaaatagtcagaaatattgaagaatttgttttctaggttcttttgacaggaatcagggatttactggcattgccgtggttaatttctgaggtcaatgtagtttatgtatatcatccttcattttgattgaaatgggtattctgcaggtaatgtgaaggcaaggtaccaaccagtaatgttcaatggcagcatagtgtactgcaggaccccttcagaagtggagaaagccacaagggacattttatgcaaaattgaaaccatgaaggcctctggccaggtttctcttggattcgatctcgagtggaggccctttccgagaagaggtttgctgtttttcctaaatcctaaccaaatctttaattgcattttcagcatgttcagattgagcaaatgtgggtttctggaatcaagtcttcttttttgaaaaaaaagaaagcctcaaactcttgcaagtaatgatattgacggaacataactgatggggtatggattttgcaggagatccaccatgtaaagttgctgtaatgcagttatgcatggagagaactcgttgttatgtcatgcacatcattcactccggagtgccacctgtactaaagtctcttttggaggatagttcgtccgttaaagtaaacacagcttccctctttccctgcagataaatccccatttttcccacgcacgggttaacatgttttcatcatgcaaaccattgtttccatgtcagtgcaggttggaatatgtatagataatgacgcaaggaaaatgttcaatgactatgatgtccatgtacagccattgatggatctgtcaaatcttgctaatgccaagttaggtttccctcctaaaagatggagtcttgcttcattaactgaaatggtcacatgtagagaggtaatatttatggtatcaagcattgttctctttgcccagttctggtagcattgaataaaaatgtgttctttctgttcagttatttatgtttgtggtctatgcattacagcaagttcggttgcacaactagttaaatgatacaagttcacctaatatttggtaggatctcttaaatgtatttcaaatacaagcatttttcttttgaaggttcttgataagttgatatacctttgattagtttatatctattagtggctcaccactagtccaatacatgttctccatccctgccctcacacagcaagacgttaaataaaacaatgcaaagcccggtgttagtgatgcggtaatcagttacatagaaacacaaccatgtcggctatcaaacttgttttgacacattatcatatcatacagaaataaaaaaagagttttggcaactggcacctgcagaaaggcgtagctattgtgtgtatgtatttgagtgtattattgtatcatgcacaaataaaaatggatggtatggttgtatgcctgtggtcttctaaaacattttcacacccaaacctagggctccttaaaatgaatgggtaaacctagtgttttgtgttaaaagcgcctgaaaaatttgggttttctaaaatttaaattttgatgctttaatcgctgcatcttctcgtctatagttgccgaagccaagcaacataagaatgggaaactgggaggcatatgttctctcaaagcaacaacttcagtatgctgctacagatgcctacatatcttggcacttgtatgaggtatatgagtgtactacttacttataaattatttttttctatccctacagtcttgacagccaattctactcttgattaggtactgcagagtctcccagacaataatgttgaggttgaaaaggagacaattacagcagcatag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0129200, RefSeq:Os04g0129200