Os04g0129600

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Revision as of 10:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0129600| Description = Conserved hypothetical protein| Version = NM_001058627.1 GI:115456983 GeneID:4334999| Length = 3802 bp| Definition ...")
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Gene Name

Os04g0129600

Description

Conserved hypothetical protein

Version

NM_001058627.1 GI:115456983 GeneID:4334999

Length

3802 bp

Definition

Oryza sativa Japonica Group Os04g0129600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:1853440..1857241

Sequence Coding Region

1853440..1853715,1854014..1854197,1856595..1856812

Expression

GEO Profiles:Os04g0129600

Genome Context

<gbrowseImage1> name=NC_008397:1853440..1857241 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:1853440..1857241 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agcccagcgcagcaaagcgctgtggtaggccctttcccctcctcctccgaaaatgatggcggctcgccgtttctccgccgccacgccctcctctcccctcctcctccgccgccgcctcctctcctctcagccacagcccacggcggcggcggcggaggccgacgcgggcgcgggggagtgggtccgtcgcgcgggggcgctctcgcttctggggctcaccggcgccgtcgccgccagcgccgtcagcgacctctccgtcttcctctcctgctccaggcgatagagaaggcctcccagaaccagcaaatagtgaatgcgatcggcgcgcccatcgtgcggggtccctggtacagcgcttccatcgccgtgaatcacgcgaggcattccgtctcctgcactttccccgtgtcggcgcctcaaggaaatgggcttctcaagttcaaggctgttcgctcgggagatgagtcgtggttttcatttctgcagcccaatgactgggaaatactcctaatggatgctatccttgatgttcctactgacgatgggaaacaccaaacaattagggtaacaattccagacaacacagcacctccaccagcaattgattgcaaggcatgcaagtcccaaccaacgctgacgccaccaccacctccatctccgtcacctccacagaagtga</cdnaseq>

Protein Sequence

<aaseq>SPAQQSAVVGPFPSSSENDGGSPFLRRHALLSPPPPPPPPLLSA TAHGGGGGGRRGRGGVGPSRGGALASGAHRRRRRQRRQRPLRLPLLLQAIEKASQNQQ IVNAIGAPIVRGPWYSASIAVNHARHSVSCTFPVSAPQGNGLLKFKAVRSGDESWFSF LQPNDWEILLMDAILDVPTDDGKHQTIRVTIPDNTAPPPAIDCKACKSQPTLTPPPPP SPSPPQK</aaseq>

Gene Sequence

<dnaseqindica>1..276#575..758#3156..3373#agcccagcgcagcaaagcgctgtggtaggccctttcccctcctcctccgaaaatgatggcggctcgccgtttctccgccgccacgccctcctctcccctcctcctccgccgccgcctcctctcctctcagccacagcccacggcggcggcggcggaggccgacgcgggcgcgggggagtgggtccgtcgcgcgggggcgctctcgcttctggggctcaccggcgccgtcgccgccagcgccgtcagcgacctctccgtcttcctctcctgctccaggtcaaaaccctagaatcccttgcccaatctccattggagtattgtattgagcgcgtgattcgcctgttcgaactgacgattaggatggtgggggggattcggatcagctaacacctatcaacagcaatttgatttgaaacgcatgaccgatgaatctgtgcatccttcctggggagtatgagagctagcattcgcaacgtgtgatgatgatgttttgcttcgcgatttttttgcatcgagttagtgagagagagatggtttgggggctaactactggtggtgctcttgttgcagccaggcgatagagaaggcctcccagaaccagcaaatagtgaatgcgatcggcgcgcccatcgtgcggggtccctggtacagcgcttccatcgccgtgaatcacgcgaggcattccgtctcctgcactttccccgtgtcggcgcctcaaggaaatgggcttctcaagttcaaggctgttcgctcgggaggtagtatgtgatatattgtttttactacttggatgctggctggatagttgttaaattgacatgaattttcttttctgcactaaacttgaattaccaccacttgaacttttaatgcatactctgcatgaatgttcatttacggatggaatagaacatatttttttagtctgcatcatttatgaagtgcttcatatcatgttctcattgcatttggacgaaaagcaaatcatattagcagattcgtttatgatttgccttacctgatagcataatgatataggtataaaaactctctgactataggtacaaataatagctataggatatgatgaacaccacgtatgcatcaatagatctcataatgctaaggtctgaggtgaacttcataatagtcattatccaccatccaaatggaatattatgaatgattggccctgatctttcatggtaatatgaatccagaaacctcctcatttgttggcatagcttgcctcctttgatgcaccagtcaaaaacctagataacaaattcttatttccccctgcaaacactcagtgtgcaaaggtgaaaatagggattgtccagtgattatattcctacacctggtacaaaaccaaagatgaaccctagatgattcctcaagcacactcacaagtgctgccaatgccatggtggtttcctggtattttttttactcaaaatattcaatccaccctcttagacgcccattggcctatgacatttatagcctagcaccagcttccctagtttaagatcatatttgaagtcccttagaaacaaacaatatgagttctcctaaaaatcaacaggagtatgctattttgcacaagattggaggctgggttggccacactttttggatttggataaggttccagccacactcctaaaaatcgaagttgcttggacttgtgctcaaagtactagcgagatttgtttttatgggcttggttgcagtagattttatcgctgtgtttggattcattctgtttttgtataatctgttggattagatcagcttggaaggccaattactagagtactggacttgtggttggttcaatcctttgcttggtttttacacatttacactctgcctaaacggttaagtattactccttatgggctgataatacttgtcgttttggacaaggacacggttttcaaaatacaattttgaccactattttttattataatatatatagaaatatcaataaatatatgattttattgaagtacatttaagatcaatctatagatatggtcaccatatttctaagacaaatattttagatgttatttatagacaaatagccttgtccaaaacgacaagtattatcaacccggagggagtagtaaggtagttcctttattcacaaattttgactaccagtagagcttgggtagatgaaagatctatggtggcaagttgagagacacaccatgcaattattaggtgcagaatacaactgtgttatttcattgttgaacagtaaaacaactttgcagctacaaactagcctaccaaaaattatgaggttagagctattggatccttgcttaagtgtacaacgtagcaataaaaaaaaaagatggcttgtcaaatttcaagtagttggcacttcatgtttgaactttacccgaagcgctgcaaatatactcgcaccggtcagaactcagaaatacttgtccttctggatataccttggatccaatctttttaaaatattttgattgtaaatataaaaaccgtgcatgtagatttgtttgaaaagtattatcataatattatatatttgttttattttacaaatacattaaaatagaaattaatggtcaaagttgcattttgaagatagtgacaatgtccaaaaggataagtatttgtgactggacggagttatattttggtatttgaactaataagcaaactctaaaattctagttctcttaaaaaggttggttccactagggctaggtcagcattgctgtgatgcctacattggcctagtaatgctctttttctcactcaactcacagtaataaacttttttctgtgacaagaactatttagactaaacgttgaatgtagtttgtaaatttggtcctgtcggtgtttctgattgctcagtggatgattttcttggtatcgagacttaatgctcatgctaatgtgttgctactgatattgcattcctccgggagctgttagttcttaaatttatcacttcgagatatttcctccaatgaagtactgtctaactaaagaaatttttgttagacaactgatatcaatacttttgagtggctattaagtcttgatccatgttgtaggagcctaaatcttatcccgtcatgttcttattcttgcagatgagtcgtggttttcatttctgcagcccaatgactgggaaatactcctaatggatgctatccttgatgttcctactgacgatgggaaacaccaaacaattagggtaacaattccagacaacacagcacctccaccagcaattgattgcaaggcatgcaagtcccaaccaacgctgacgccaccaccacctccatctccgtcacctccacagaagtgaattcgtctggagaaattcttttggtccggaaatacctaccttggattagtcttttttactctattcctcattgaccatgaaagaaataagtactgcagttggaccgagagaacagcagattctttacttttgtttttgcaatgatacaacatagaataggttacctgattgttccccactcagcaatactttggaaggtggatccatcaatcactaaactagatttgctttaggacttgctagcgaggcagcgttttggcactcaagttttttagggtttatactacatgatactccatgagaatctaggttggttaattcagtgcttcttcctggttgtccaagccttctggttggcatgtggaaatacatcatactaaatactgatattatgtagcagtttgggtaggaatgtacgatttgaagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0129600, RefSeq:Os04g0129600