Os04g0132500

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Revision as of 10:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0132500| Description = Protein kinase-like domain containing protein| Version = NM_001058632.1 GI:115456993 GeneID:4335004| Length = 4337 b...")
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Gene Name

Os04g0132500

Description

Protein kinase-like domain containing protein

Version

NM_001058632.1 GI:115456993 GeneID:4335004

Length

4337 bp

Definition

Oryza sativa Japonica Group Os04g0132500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:2021656..2025992

Sequence Coding Region

2021988..2024937,2025164..2025657

Expression

GEO Profiles:Os04g0132500

Genome Context

<gbrowseImage1> name=NC_008397:2021656..2025992 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:2021656..2025992 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagctgccattgccaccattgttgccaagccccatgcacttccttctcctcttactccacctcctctccttctcctcctccaccgccgcctcggcttcatcggaggtcgccttcctgacgcaatggctcaacaccacggcggcgcggccgccggactggtcgccgtcggcgtcgtcgccgtgcaagtggtcgcacgtcggctgcgatgccgccacggggagcgtcacctccgtcacgttccagtcggtgcacctcgccgcgccgctcccccccggcatctgcgccgcgctcccgtcgctcgcgtcgctcgtcgtctccgacgccaacctcaccggcggcgtccccgacgacctccacctgtgccgccgcctcgccgtgctcgacctcagcggcaactcgctctccggccccatcccggcctcgctcgggaacgcgacggccatggcgtcgctggcgctcaactccaaccagctctcgggcccaatcccggcgtcgctcggcaacctcgccgcgtcgctcagggacctcctgctcttcgacaaccgcctctccggcgagctcccggcgtcgctcggcgagctgcggctgctcgagtcgctgcgcgccggcggcaaccgtgacctcggcggcgagatcccggagtcgttctcgaggctctccaacctcgtcgtgctcggcctcgccgacaccaagatctccggcgcgctcccggcgtcgctggggcggctccagagcttgcagacgctgtccatctacacgacgatgctgtccggctccatcccggcggagctcgccggctgcggcaacctcaccaacgtctacctctacgagaactcgctctccggcccgctcccgccgtcgctgggcgcgctgccgcggctgcagaagctgctgctatggcagaactcgctgacggggcccatcccggacaccttcggcaacctcacctccctcgtctccctcgacctctccatcaacgccatctccggcgccatcccggcgtcgctcggccgcctcccggcgctgcaggacctcatgctcagcgacaacaacctcacggggaccatcccgccggcgctggcgaacgcgacgtcgctcgtccagctccagctcgacaccaacgccatctccggcctcatcccgccggagctcggccgcctcgccgcgctgcaggtggtgttcgcgtggcagaaccagctcgagggctccatcccggcgtcgctcgccggcctcgccaacctccaggcgctcgacctctcgcacaaccacctcaccggcgccattccccccgggatcttcttgctccgcaacctcaccaagctgctcctcctctccaacgacctctccggcgtcatcccgccggagatcggcaaggcggcgagcctcgtgcggctgcggctaggaggaaaccggctcgccgggacgatcccggcggcggtggccgggatgaggagcatcaacttcctcgacctcggcagcaaccgcctcgccggcggcgtccccgccgagctcggcaactgctcgcagctccagatgctcgacctcagcaacaacacgctcaccggcgcgctgccggagtcgctcgccggcgtccgcggcctgcaggagatcgacgtgtcacacaaccagctcaccggcggcgtccccgacgcgttcgggaggctggaggcgctcagccgcctcgtcctcagcggcaactcgctctccggcgccatcccggcggcgctgggaaagtgccgcaacctcgagctcctcgacctcagcgacaacgccctctccggccgcatccccgacgaactctgcgccattgatggcctcgacatcgcgctcaacctcagccggaacgggctcaccgggccgatcccggcgaggatctcggcgctgagcaagctctcggtgctcgacctgtcgtacaacgcgctcgacggcggcctcgcgccgctcgccggcctcgacaacctcgtcacgctcaacgtgtccaacaacaacttcaccggctacctcccggacacgaagctgttccggcagctgtcgacgtcgtgcctcgccggcaactccgggctctgcaccaagggcggcgacgtgtgcttcgtcagcatcgacgccagcgggaggccggtgatgagcgccgacgaggaggaggtgcagcggatgcaccggctcaagctcgccatcgcgctgctggtgacggcgacggtggcgatggtgctgggcatggtcgggatcctacgggcgcgcgggatgggcatcgtcggcgggaagggcgggcacggcggcgggagcagcgactcggagtccggcggcgacctggcgtggccgtggcagttcacgccgttccagaagctgagcttcagcgtcgagcaggtggtgcgcaacctcgtcgacgccaacatcatcggcaagggctgctccggcgtggtgtaccgcgtcggcctcgacaccggcgaggtcatcgccgtcaagaagctctggccaagcacccgcaacggcgccgacaaggacgacgtcgccggcggcgggcgcgtccgcgactcgttctcggcggaggtgaggacgctggggtgcatccggcacaagaacatcgtgaggttcctcggctgctgctggaacaagacgacacggctgctcatgtacgactacatggcgaacggtagcctgggtgctgtgctccacgagcgccgccatggcggccatggcggcggcggcgcgcagctggagtgggatgtgaggtacaggatcgtgctcggtgcggcgcaggggctcgcgtacctgcaccacgactgcgtgccgccgatcgtgcaccgcgacatcaaggccaacaacatcctcatcgggctcgacttcgaggcctacatcgccgacttcggcctcgccaagctcgtcgacgacggcgactttggccgctcgtccaacaccgtcgccggatcatatggctacatcgccccagagtacgggtacatgatgaagataacggagaaaagcgacgtgtacagctacggggtggtggtgctggaggtgctcaccgggaagcagcccatcgaccccaccatccccgacggccagcacgtcgtcgactgggtccgccgccggaagggcgccgccgacgtgctcgacccggcgctgcgcggccgctccgacgccgaggtcgacgagatgctgcaggtcatgggcgtcgccctcctctgcgtcgccccttcccccgacgaccgccccgccatgaaggacgtcgccgccatgctcaacgagatccgcctcgaccgcgacgactacgccaacgtcgacctcctcctcaagtccggcgccgccgccgcctcgccgcctcgcgccgccgccgccgccacgtcgacgtcgtcgagcacgccgccgagcagcagcagcttctccggctcatccgccatgatctacaactcatcatccaaggccaagtcgccattcgattga</cdnaseq>

Protein Sequence

<aaseq>MQLPLPPLLPSPMHFLLLLLHLLSFSSSTAASASSEVAFLTQWL NTTAARPPDWSPSASSPCKWSHVGCDAATGSVTSVTFQSVHLAAPLPPGICAALPSLA SLVVSDANLTGGVPDDLHLCRRLAVLDLSGNSLSGPIPASLGNATAMASLALNSNQLS GPIPASLGNLAASLRDLLLFDNRLSGELPASLGELRLLESLRAGGNRDLGGEIPESFS RLSNLVVLGLADTKISGALPASLGRLQSLQTLSIYTTMLSGSIPAELAGCGNLTNVYL YENSLSGPLPPSLGALPRLQKLLLWQNSLTGPIPDTFGNLTSLVSLDLSINAISGAIP ASLGRLPALQDLMLSDNNLTGTIPPALANATSLVQLQLDTNAISGLIPPELGRLAALQ VVFAWQNQLEGSIPASLAGLANLQALDLSHNHLTGAIPPGIFLLRNLTKLLLLSNDLS GVIPPEIGKAASLVRLRLGGNRLAGTIPAAVAGMRSINFLDLGSNRLAGGVPAELGNC SQLQMLDLSNNTLTGALPESLAGVRGLQEIDVSHNQLTGGVPDAFGRLEALSRLVLSG NSLSGAIPAALGKCRNLELLDLSDNALSGRIPDELCAIDGLDIALNLSRNGLTGPIPA RISALSKLSVLDLSYNALDGGLAPLAGLDNLVTLNVSNNNFTGYLPDTKLFRQLSTSC LAGNSGLCTKGGDVCFVSIDASGRPVMSADEEEVQRMHRLKLAIALLVTATVAMVLGM VGILRARGMGIVGGKGGHGGGSSDSESGGDLAWPWQFTPFQKLSFSVEQVVRNLVDAN IIGKGCSGVVYRVGLDTGEVIAVKKLWPSTRNGADKDDVAGGGRVRDSFSAEVRTLGC IRHKNIVRFLGCCWNKTTRLLMYDYMANGSLGAVLHERRHGGHGGGGAQLEWDVRYRI VLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLDFEAYIADFGLAKLVDDGDFGRSSN TVAGSYGYIAPEYGYMMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGQHVVDWVRR RKGAADVLDPALRGRSDAEVDEMLQVMGVALLCVAPSPDDRPAMKDVAAMLNEIRLDR DDYANVDLLLKSGAAAASPPRAAAAATSTSSSTPPSSSSFSGSSAMIYNSSSKAKSPF D</aaseq>

Gene Sequence

<dnaseqindica>333..3282#3509..4002#agaagcccaatgcattgaagcaagcacccacatttcaccatgacaccaccaccaccactatccatctggagcaagcaaccaagcaccaagacacaagcaaacagctcaacctgttgagtgttttgaggaggaaaagagagagagagtagctagagagagagagagagagagagagagagagaaacaaggtgtttgttttcactcttgaaccatggtgagtgagtgaagagtgagagtgaagttcatagagatcatcacctctcttgaaccaagcaagcttggttagcatagtgtattgtgcactgccccaagcaagcacagcacgatttttgatgcagctgccattgccaccattgttgccaagccccatgcacttccttctcctcttactccacctcctctccttctcctcctccaccgccgcctcggcttcatcggaggtcgccttcctgacgcaatggctcaacaccacggcggcgcggccgccggactggtcgccgtcggcgtcgtcgccgtgcaagtggtcgcacgtcggctgcgatgccgccacggggagcgtcacctccgtcacgttccagtcggtgcacctcgccgcgccgctcccccccggcatctgcgccgcgctcccgtcgctcgcgtcgctcgtcgtctccgacgccaacctcaccggcggcgtccccgacgacctccacctgtgccgccgcctcgccgtgctcgacctcagcggcaactcgctctccggccccatcccggcctcgctcgggaacgcgacggccatggcgtcgctggcgctcaactccaaccagctctcgggcccaatcccggcgtcgctcggcaacctcgccgcgtcgctcagggacctcctgctcttcgacaaccgcctctccggcgagctcccggcgtcgctcggcgagctgcggctgctcgagtcgctgcgcgccggcggcaaccgtgacctcggcggcgagatcccggagtcgttctcgaggctctccaacctcgtcgtgctcggcctcgccgacaccaagatctccggcgcgctcccggcgtcgctggggcggctccagagcttgcagacgctgtccatctacacgacgatgctgtccggctccatcccggcggagctcgccggctgcggcaacctcaccaacgtctacctctacgagaactcgctctccggcccgctcccgccgtcgctgggcgcgctgccgcggctgcagaagctgctgctatggcagaactcgctgacggggcccatcccggacaccttcggcaacctcacctccctcgtctccctcgacctctccatcaacgccatctccggcgccatcccggcgtcgctcggccgcctcccggcgctgcaggacctcatgctcagcgacaacaacctcacggggaccatcccgccggcgctggcgaacgcgacgtcgctcgtccagctccagctcgacaccaacgccatctccggcctcatcccgccggagctcggccgcctcgccgcgctgcaggtggtgttcgcgtggcagaaccagctcgagggctccatcccggcgtcgctcgccggcctcgccaacctccaggcgctcgacctctcgcacaaccacctcaccggcgccattccccccgggatcttcttgctccgcaacctcaccaagctgctcctcctctccaacgacctctccggcgtcatcccgccggagatcggcaaggcggcgagcctcgtgcggctgcggctaggaggaaaccggctcgccgggacgatcccggcggcggtggccgggatgaggagcatcaacttcctcgacctcggcagcaaccgcctcgccggcggcgtccccgccgagctcggcaactgctcgcagctccagatgctcgacctcagcaacaacacgctcaccggcgcgctgccggagtcgctcgccggcgtccgcggcctgcaggagatcgacgtgtcacacaaccagctcaccggcggcgtccccgacgcgttcgggaggctggaggcgctcagccgcctcgtcctcagcggcaactcgctctccggcgccatcccggcggcgctgggaaagtgccgcaacctcgagctcctcgacctcagcgacaacgccctctccggccgcatccccgacgaactctgcgccattgatggcctcgacatcgcgctcaacctcagccggaacgggctcaccgggccgatcccggcgaggatctcggcgctgagcaagctctcggtgctcgacctgtcgtacaacgcgctcgacggcggcctcgcgccgctcgccggcctcgacaacctcgtcacgctcaacgtgtccaacaacaacttcaccggctacctcccggacacgaagctgttccggcagctgtcgacgtcgtgcctcgccggcaactccgggctctgcaccaagggcggcgacgtgtgcttcgtcagcatcgacgccagcgggaggccggtgatgagcgccgacgaggaggaggtgcagcggatgcaccggctcaagctcgccatcgcgctgctggtgacggcgacggtggcgatggtgctgggcatggtcgggatcctacgggcgcgcgggatgggcatcgtcggcgggaagggcgggcacggcggcgggagcagcgactcggagtccggcggcgacctggcgtggccgtggcagttcacgccgttccagaagctgagcttcagcgtcgagcaggtggtgcgcaacctcgtcgacgccaacatcatcggcaagggctgctccggcgtggtgtaccgcgtcggcctcgacaccggcgaggtcatcgccgtcaagaagctctggccaagcacccgcaacggcgccgacaaggacgacgtcgccggcggcgggcgcgtccgcgactcgttctcggcggaggtgaggacgctggggtgcatccggcacaagaacatcgtgaggttcctcggctgctgctggaacaagacgacacggctgctcatgtacgactacatggcgaacggtagcctgggtgctgtgctccacgagcgccgccatggcggccatggcggcggcggcgcgcagctggagtgggatgtgaggtacaggatcgtgctcggtgcggcgcaggggctcgcgtacctgcaccacgactgcgtgccgccgatcgtgcaccgcgacatcaaggccaacaacatcctcatcgggctcgacttcgaggcctacatcgccgacttcggcctcgccaagctcgtcgacgacggcgactttggccgctcgtccaacaccgtcgccggatcatatggctacatcgccccaggtaagttttttctttaagataatggaagctttatcgaaacttattcaattacatcaagatggtacaaccaattgagcccactccgcttaaaattcacgcaaccaaaaaggacaaaccacccatcttaagcacaaatgttgaacagaatcatatagttcagtggctttcaatactatgtcacaaaagttacttcaatctttcaccttctgattaacaaacattgcagagtacgggtacatgatgaagataacggagaaaagcgacgtgtacagctacggggtggtggtgctggaggtgctcaccgggaagcagcccatcgaccccaccatccccgacggccagcacgtcgtcgactgggtccgccgccggaagggcgccgccgacgtgctcgacccggcgctgcgcggccgctccgacgccgaggtcgacgagatgctgcaggtcatgggcgtcgccctcctctgcgtcgccccttcccccgacgaccgccccgccatgaaggacgtcgccgccatgctcaacgagatccgcctcgaccgcgacgactacgccaacgtcgacctcctcctcaagtccggcgccgccgccgcctcgccgcctcgcgccgccgccgccgccacgtcgacgtcgtcgagcacgccgccgagcagcagcagcttctccggctcatccgccatgatctacaactcatcatccaaggccaagtcgccattcgattgaaaccaccatataactctgaacagaaaacataagaaaaatgtttgtgccttcttgggcttgtttgatgatcttacatgtgtttgtggtggagaatttgatgcgagtttgttgtgaatttgtgatggtaggtggtgagctgtgtaaatgaatggggggaagaggaggagaaggataggctgtttgaattcgtttctttttgttttgtttttggagagtagaagtagatggagctgaggaattaggaagaactagaacctgcagaagcaaaaagcttgatggctttgttttgttagtgttcagtgtatgcctgttgaataaagatccaagattacctt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0132500, RefSeq:Os04g0132500