Os04g0136900

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Revision as of 10:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0136900| Description = Conserved hypothetical protein| Version = NM_001058637.1 GI:115457003 GeneID:4335012| Length = 6261 bp| Definition ...")
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Gene Name

Os04g0136900

Description

Conserved hypothetical protein

Version

NM_001058637.1 GI:115457003 GeneID:4335012

Length

6261 bp

Definition

Oryza sativa Japonica Group Os04g0136900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:2428687..2434947

Sequence Coding Region

2432799..2433696,2433777..2433860,2434599..2434681

Expression

GEO Profiles:Os04g0136900

Genome Context

<gbrowseImage1> name=NC_008397:2428687..2434947 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:2428687..2434947 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccagctagtgacaagcaactagcatccacagtgaagaaagtaacatcgcgtgagctgccaaagaaaggtgcagacattgtaaatatgtctcagggcacttcaccgctgccaaaggataaaggtactgcgacagagcctggaaagaccgtgggcaccaaacggtctgatgctccttcaagtcctgggtatcataatgtttatgtacgaagaaaagtggaaaatgaccatagtaaagtgagttcttctcaggaggtgaagggtaatggaagagacaaaacaaaagagcaggagacacagcaaaatgtgcaacatgatcagaccaataaaccagaagtgtcatcttctgttgctgtgcaacatgatcagtccaataagccagatttgtcatcttctgttgctgtgcaacatgatcagaccaataaaccagaattgtcatcttctgttgctgtgcaacatgatcagtccaataagccagatttgtcatcttctgttgctgtgcaacatgatcagaccaataagccagaatggccatcttctgttgctgtgcaacatgatcagaccaataagccagaattgccatcttctgttgctgtgcaacatgatcagaccaataagccagaattgccatcttctgttgctgtgcaacatgatcagaccaataagccagaattgccatcttctgttgctgaatctggaggcatagtgtctcctaaatctcctgaaaaaacaaatgaacaaattgtgaacaagaaaaatgagcctcctgtagctcctggtactaccgttcaagatgatacccataagtcaagcaatcaatactggaatgcgagatttaatcggttacagacatatttggagagctgtgatcggtcaactcaggagggttatatgcgaatgcttaggtccctctcggcggctgatcgaagcatgcatgcaattgatctggagaaaagggcaattcacttattagtggaggaagggaaagagctgcaacggatgaaggctttgaatgttctgggaaaagtttcgccaaacggtccttcaaaacaggcccctttgtag</cdnaseq>

Protein Sequence

<aaseq>MPASDKQLASTVKKVTSRELPKKGADIVNMSQGTSPLPKDKGTA TEPGKTVGTKRSDAPSSPGYHNVYVRRKVENDHSKVSSSQEVKGNGRDKTKEQETQQN VQHDQTNKPEVSSSVAVQHDQSNKPDLSSSVAVQHDQTNKPELSSSVAVQHDQSNKPD LSSSVAVQHDQTNKPEWPSSVAVQHDQTNKPELPSSVAVQHDQTNKPELPSSVAVQHD QTNKPELPSSVAESGGIVSPKSPEKTNEQIVNKKNEPPVAPGTTVQDDTHKSSNQYWN ARFNRLQTYLESCDRSTQEGYMRMLRSLSAADRSMHAIDLEKRAIHLLVEEGKELQRM KALNVLGKVSPNGPSKQAPL</aaseq>

Gene Sequence

<dnaseqindica>4113..5010#5091..5174#5913..5995#aaatccccattttctctccctcctctcttctcttctcttctctgcctctcgccgcccgctcgtcagcccggcgtccccctccaccgccgcctctccaccatctccccctcctcatctacctcgtcccgcctccctgcctcgctcgcagcaccgccgggtcgctcctcctccgcccaccccaccgtgggcaccacccccgcgcctccaccgccgatctcaggtgagtcctcccctcctcctcccacccacccacccacccgtgtgtcgcgaagcagctgtattcgaggctaccgaccagctcccccccccccacgcgatttgtattgtacgcgttccgttttcctagtgtggaattggatttttagtttgttcctggaattgggagcggcttctttctttctttgccccccatttgtggaaacaaatcagctttcagcatttcgatttgtgaatgcccccccgctcgatcccgttgatatgacctagcattaggattaggttcatgctttagcccttcttcttcagaacagggaaagcaattaaaatctttagtttattatgcctgtttttttggcctgtaatcaattcctgttagcctgtgtgttcaattcgatgacttcttgtttggtttattttgtgctaatgatgacatatgggggtgtcattagcaagagaggaatttagctttagttattagttgcctattaaatcacgatgtgatacatgctgtgagctttatatagttattagtgagctggtttttttttatagggaaccccatgctgatttgattttgtgacttcactgcgatgtttttcctcgtttgggattagcctgttgtttctgtgtgagggtgagaataagccattttaggtagcagctgtgatgatatgagacgagatctcatcattttgaatagtaaaaatgatggcaagttcctacccatcaccgtttgatttgtggtctatggtgggggtgagaggttatttacctgtgctcgaatcatttaaattttattagcagcagaattactttctcttacttacattttcgttttattgcttacaaataatgtatatgtcgagatggccaattagtgctattattttttttcacccaaatgaaagctctgccaattttcattaagaaaaagacaatcgccaaagtctttattctttttttagcttgccattttatgctggttctgtgaattccaggttgctctgaacaattagttttgttaggtttatattgcaagttatgcaatcttgagatgtgaaaaacaaggaaatgatcgaatcttatttattactgctgaagtgctgattctcatcggctactaaagaacagtagatggacaaagctaatgtttaaattttgagcctatggtatgaaagccctgtaataatggactaagcttaattacatgcatttacttcttctctaagtaaagttaatgcagttattcaattgtgtccgagtcttgtgggaggcttaattttagacatgcaatctcaggttttcttgtaaaatacagtgccctccacttcagtttaaattttatctagtcattgcactccacagcaacggttttaacccctttgattgtccaatttggtttcatctgaatgtgaatgcatatgccactttggttgcaactgctgtaggatgacagggataagatatgaacaatttgaatttacaaaggtctcttttcctggtcaagaccaatttctttgtggtttatagtgagagggtaaacttatctgcccgtgaattgctcaattttttaagaactattttttctttctttttgtggctatgttatttttctgttttacataaagcaatgtccatgcattgatggcaatatagccagatagccttgtattttctggaccaaaaatttgacaatagcatgatcatggaaagactttgaattccacagtagcatgatcctgaatgacagtacgataataataaaaaaaggtgcatttgttccttatttgctgttcctgatataactaggaaataaaagatagcttaggccatgattgaagttatgatgttcacttatatcttgattaataagctctatgcttgatattttactgtcatatgccatggaatctcaacgtaaacatcaaccttcacatgttaattttttcaggcttactaaaatcacgataatcaatcttgcatggttcactgtgctagatacatatggatgtttgttcacttttactagaactaattctattcactgtgctagtctcgttgattttccacttctccttttgcctaatggaatattctctttactattctacttgtgctgaaagggatactatctctgtgtacaaatactcgacacaattggctcaattatgcaaattttgaccactactattttattgataaatttgtaaatacctaaaactatacaatattattggagtaagttgaatggcaaatctaataatacgacatccattcatcctatctgaacaatttcaaaaatagattattggtggtccaagttttatagtatagttagccatgtcaaacatatgaataaaagtaaaacacttgttttgtgtgtgaccaaaaattatgcttccactaacatttgttagaacttggcgcatgaagttcattgcatgcccaaccatgggcatctacctgagaggcatatgtgcatttacccatccaaatgaatatattctttttataaaagtgtttgcctttcatgggaagatcattcaagagtatgcctccccttgtattagcaaattatttccatatgacactagagatgcacagataaaaattatgtcaaaccatcttgacatgggatcttatgatattgtgaaaaataatgcaccgttgctcccttttcttgtgcattctttttttagcatatggccattgtttataggtagattataccccttttctgtatatgtaacatatgttcatctctatgacagtattcaagtttaaacatttttaaacgtggattattcagtccatttttttatttgtgaaagtattctggaattgatggtttgctgcctctttcaatatctaattaactcttccttaacagaagagaactcagccaagatctatataaattattgccatgaaaatatctagttttgcattgcttttttttaaaaaaatcaaactgttctcctaattcattgggtgaattctaagcatcttatcttatatatatagtgaaagcagcaagctttcttgcataaggatatgccataccataaaaaacatattgaccatcggataaagagtttggataaagaatggccacattaataaaagaacacaaaatggctaaacatatggggatttccagaggtttctagtgcctcctcttagacacatgaaacaaatagagagggggcaaagactatgaagggaaaaaaaacacaggaggcttccaatgattccttttgtaaacatatagtataagttagctaaatctatagttggttaggccaatatattttgtaaataaattaactgatgtcaaaaccttcttaaaagctaagctaaactaataaaccatatacacaagttcttaaactggatctaagtcgcgcaaagtgcgactatgtggctagtgtaatcagggatatatctagcagttggtaaaaccaaactgcagaaatcaaagactttaagttgcacatgaagcttatcactagttaccgtttaaattatttcctgtaataattttctattgtatgttttcctgtgttagaacaaatattagaatattgcaccatttgttgcattctcttcaattttattttgaagagtctcagttgtaatgcctgtgtcaaattcatgaacttgcatcaaacagtatacaacgatcttcaatagaaaactacattgcttcgctatcaccttttttttttttttttgggggggggggggggagctatatttgagcagatggggtctttctagttaattatcttttgtgatggttgttcatcttattgaggacagcatcttgtgtattgcaggttccattaacttcgattatataatgtagaaaagtgtagcaggagccaatagccatgccagctagtgacaagcaactagcatccacagtgaagaaagtaacatcgcgtgagctgccaaagaaaggtgcagacattgtaaatatgtctcagggcacttcaccgctgccaaaggataaaggtactgcgacagagcctggaaagaccgtgggcaccaaacggtctgatgctccttcaagtcctgggtatcataatgtttatgtacgaagaaaagtggaaaatgaccatagtaaagtgagttcttctcaggaggtgaagggtaatggaagagacaaaacaaaagagcaggagacacagcaaaatgtgcaacatgatcagaccaataaaccagaagtgtcatcttctgttgctgtgcaacatgatcagtccaataagccagatttgtcatcttctgttgctgtgcaacatgatcagaccaataaaccagaattgtcatcttctgttgctgtgcaacatgatcagtccaataagccagatttgtcatcttctgttgctgtgcaacatgatcagaccaataagccagaatggccatcttctgttgctgtgcaacatgatcagaccaataagccagaattgccatcttctgttgctgtgcaacatgatcagaccaataagccagaattgccatcttctgttgctgtgcaacatgatcagaccaataagccagaattgccatcttctgttgctgaatctggaggcatagtgtctcctaaatctcctgaaaaaacaaatgaacaaattgtgaacaagaaaaatgagcctcctgtagctcctggtactaccgttcaagatgatacccataagtcaagcaatcaatactggaatgcgagatttaatcggttacagacatatttggagagctgtgatcggtcaactcaggagggttatatgcgaagtaagatatctggataaccttgtgataatccatagatttttttccacatatagtacttacttcatttcacctatctccagtgcttaggtccctctcggcggctgatcgaagcatgcatgcaattgatctggagaaaagggcaattcacttattagtggaggaaggtaataaactacctgccatttcctgtttcccgtaacttttaaatattagggctgcatcatatcattagactgttctgtagcgtagcatacctctgctgccacatctgatgatctgaaggaaaggaaccctaatgctatatattgcatctcttgcatccctgtttcttatatagtttttatctatggtagtatatcatacagagtttgctgctaatctcatatgaacttgaaacacttaatcgttgcatttagtaagacagtatttatattatgaaacaaaattagtgcatattgagctggaacacatcatcatcataggattatgtagttgatgcgaagttacaatgcatggtgccatccaactaacatctatgtgatgcccatgcatttgaactatggtaaaatccttatttgcccttgaaagttgacccgatcccttagtttcctttgcaatactagttatgaatttgagacccatcaacatatagctgatgatataatcactcaatcccaataacatttactgcaatggacattagaaatgtcaatatcaatgctatgaaatgctgagaggcgtgcatgttaacttttgctacagacgctcgtgccattaattcatttcattgttgctcaatctgtaatcattactagaacgtgtcaagtaattcggcataatttcttcttgtttccattatcaagaatgtgcattatgaagcacacaataatatcatttcgcagggaaagagctgcaacggatgaaggctttgaatgttctgggaaaagtttcgccaaacggtccttcaaaacaggcccctttgtagcgacaggaccaagaacgagatggatggtgtaattcgaagagctgaaatgttccaggtccatcgcagcaaagactatggtctactcatgtagctccatttttccttgggcctcctttgccatgtaactcattttccttcatttctttctgcttttacctctcgacgacttaccaacctcatgtgctgtgagattgctgtaatgtggtgtaattaacttgtatggataaacctgccatgcttaatggccaagcgtgacaatttcaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0136900, RefSeq:Os04g0136900