Os04g0147200

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Revision as of 10:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0147200| Description = Conserved hypothetical protein| Version = NM_001186821.1 GI:297722772 GeneID:9271055| Length = 3582 bp| Definition ...")
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Gene Name

Os04g0147200

Description

Conserved hypothetical protein

Version

NM_001186821.1 GI:297722772 GeneID:9271055

Length

3582 bp

Definition

Oryza sativa Japonica Group Os04g0147200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:3283082..3286663

Sequence Coding Region

3283275..3285545

Expression

GEO Profiles:Os04g0147200

Genome Context

<gbrowseImage1> name=NC_008397:3283082..3286663 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:3283082..3286663 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctggatggatcattaccttcctgctcatcctacagtttatttcgtcgctccgtggattggtaatcttcagcttcgttgctcattttttcctcgtcttcttcgctggactccgccgccatcaaccaaccggcgtgcggatgttcatcctgtggggagcgaaccagtttgcccgttgggctccggtcaccgtgctgggcacgctgtcagtcggcagcacgccacagaaagagcagctggtgacgctctgggtggcgttcatgctgctgcacgccggcatgcctgacaacttcaccgcctactccttggaggacaccgttctctcgaggcggcagcaggctggcgtgtggtatcagctgcttggatcggcgtcaccattccctttcctgctgaagaacatctccttcatcatcagcaatggcggcgacgccatgctcggggtctcctcgctcgtcttgttgatggccatcggcaagtattgggagggagcattccaagcgctgatgcagggcaacctgaagagcatgcaaagctcgagaaagaagatgaagatgaagaacaacagtacaaaatcagtacgaaacagcctccagatcgctaggcgtggaggcagggagccgaatgatgagcaaatccttctggctgctcatgacatgctagacatcaccaaggacgccttcatcgattttctggaccaaaataatgcggatgaacaagaagcactctctgctacatgggatgagaagctgtacagggtggtcaacatggagctctccctcatgtacgacctcatctacaccaaggcggccgtggtgcactcatggaaaggctacatcctccgtttcgcctctccgatcgccgcgacggcggcattcgtgctgttttggctccacagcaaggaaggtcaggcgacggccgacgtcgtgatcacctatgtcctgctggccggcatggtcgtcctggacatcaaatggcttctccgagcggtggcgtcgacatggttctactcgttccttgatgagaggccacgatcgtggcttcatcatgcacttctgtgctcagggaaatggcgactgatccgtcgcctcatcgtgtctgatctgaatctgtttcggatccttgacaataataagaagccaactagatacaggatgtggtcacaaaccattggacagtacaacttgttgcacgagtgcactcgctacgagagcgaggcaaggaccaagaactggaagagcggcatgttcaagcggttagcaccggaggagaactggatggagtacgaataccagcgcatgaggggcaatcatattgattcaagagatttcagggacgagttgttcaactctatctggcaagtcttgaagaaacccttcccacaacgacgaccaccacgacaaataatagtgacggaggcctggaggcctgcaccggcggctcctccatttacacatgctcatcaggaagcagaccttgccctgaagttcactcctgatttacaagagaccattcttatcttgcacatcgccacggacatattcctcttctcagcggaatcagaaattgaagcatcgcccaagtccaaaaaggatgtggaggtgatcaaggcgttgtcagattacatgatgttcctcgtcgcggtgcggcccgggatgctaccgggcctcgtcctcagtagccgatatgaagctgtcagtgaggctcttgccggaatatggaaggagaaagaaggtagtgatccttccttgcgtactagctcaatgatgagagagaaacgtcttgccgagatcctgattgccaacgaagatgaggagggaaattacttccaggtggacgattcgaggccccaaagcggctttctgagtgttctttacgacacgagtaatgttctatcagagggagctatactagccatgtttctgctacctaggataagaggtcctaattttagaaagaatatcattgaaaaagttggagaacacggcgacggcgagcccccaatactaaagaaatttcaccggcagtttccggatttgatggaattcgctaagaatgtctcttttccatcaatcgcaatgacgacggatgccatcatcggggagtgggcacgtcagctgattaacgtgtccatccgatgtacaagggattctcatgccaagcagcttgcccgtggtggtgagctcacgaccgttgtgtggatccttgctgaacatgctcgcatacttcgcatcaaaacagaaaagaaaccagctagctacgacgcagtatag</cdnaseq>

Protein Sequence

<aaseq>MPGWIITFLLILQFISSLRGLVIFSFVAHFFLVFFAGLRRHQPT GVRMFILWGANQFARWAPVTVLGTLSVGSTPQKEQLVTLWVAFMLLHAGMPDNFTAYS LEDTVLSRRQQAGVWYQLLGSASPFPFLLKNISFIISNGGDAMLGVSSLVLLMAIGKY WEGAFQALMQGNLKSMQSSRKKMKMKNNSTKSVRNSLQIARRGGREPNDEQILLAAHD MLDITKDAFIDFLDQNNADEQEALSATWDEKLYRVVNMELSLMYDLIYTKAAVVHSWK GYILRFASPIAATAAFVLFWLHSKEGQATADVVITYVLLAGMVVLDIKWLLRAVASTW FYSFLDERPRSWLHHALLCSGKWRLIRRLIVSDLNLFRILDNNKKPTRYRMWSQTIGQ YNLLHECTRYESEARTKNWKSGMFKRLAPEENWMEYEYQRMRGNHIDSRDFRDELFNS IWQVLKKPFPQRRPPRQIIVTEAWRPAPAAPPFTHAHQEADLALKFTPDLQETILILH IATDIFLFSAESEIEASPKSKKDVEVIKALSDYMMFLVAVRPGMLPGLVLSSRYEAVS EALAGIWKEKEGSDPSLRTSSMMREKRLAEILIANEDEEGNYFQVDDSRPQSGFLSVL YDTSNVLSEGAILAMFLLPRIRGPNFRKNIIEKVGEHGDGEPPILKKFHRQFPDLMEF AKNVSFPSIAMTTDAIIGEWARQLINVSIRCTRDSHAKQLARGGELTTVVWILAEHAR ILRIKTEKKPASYDAV</aaseq>

Gene Sequence

<dnaseqindica>1119..3389#aaacccaccaaggcaccaatgtatatcttgtttgctgttgttctagcatttgtagattccaaacttgatagagatatatatcggtcaggtgtacgcgcgtatagtccatcagtggcaacagtaacgccgtcgacttcaaccatcgcctggtacgtctcgttgtcgtgctgcttgtaattcatctagtttgtctacgttaaactttcttcctacttaactaggccaaatatacggtggaaccgtggaaactcaatctaacaaaaatctcatataaaccacacaaaagaagtctcacatgtagtcatgtagtactgtgtagataagatggatatcaatggtcatgtggaaactagaaaatcttatccaaattggttaagtttttctgagactaaaactaacatatctttcaagtactacctccgttttttaatagataacgccgttgctttttctcacatgtttgaccattcgtcttattcaaaatatttacggaattataatttattttgttatgagttgttttatcactcatagtactttaagtgtgatttatatcttatacatttgcataaaatttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggagggagtagaaaatagtattggcgatttgtttgaaaattaaaattctcatttttttgtctcgccaatgaagttgaatttggacaagactttttatactgctattgaacgtcatcttatctacatgtgggatttttttccatgtagatttagataacctttactccctccgtcccaaaaaaagtcaaactgcgggtttacgtgccaacgtttgaatgtccgtcttatatgaaatttttttataattagtattttcattgttgttagatgataaaacatgatgaatactttatgcgtgacttctctttttaatttttttcataattttttcaaataagacggatggtcaaacattggacacggaaatcagggttcgtctttttttgggacggagggagtatgtcgtggtttattcgagttttcatggtttccacagtatattttcgcactcaactaacaaatgcactattagcaggggcaatgcctggatggatcattaccttcctgctcatcctacagtttatttcgtcgctccgtggattggtaatcttcagcttcgttgctcattttttcctcgtcttcttcgctggactccgccgccatcaaccaaccggcgtgcggatgttcatcctgtggggagcgaaccagtttgcccgttgggctccggtcaccgtgctgggcacgctgtcagtcggcagcacgccacagaaagagcagctggtgacgctctgggtggcgttcatgctgctgcacgccggcatgcctgacaacttcaccgcctactccttggaggacaccgttctctcgaggcggcagcaggctggcgtgtggtatcagctgcttggatcggcgtcaccattccctttcctgctgaagaacatctccttcatcatcagcaatggcggcgacgccatgctcggggtctcctcgctcgtcttgttgatggccatcggcaagtattgggagggagcattccaagcgctgatgcagggcaacctgaagagcatgcaaagctcgagaaagaagatgaagatgaagaacaacagtacaaaatcagtacgaaacagcctccagatcgctaggcgtggaggcagggagccgaatgatgagcaaatccttctggctgctcatgacatgctagacatcaccaaggacgccttcatcgattttctggaccaaaataatgcggatgaacaagaagcactctctgctacatgggatgagaagctgtacagggtggtcaacatggagctctccctcatgtacgacctcatctacaccaaggcggccgtggtgcactcatggaaaggctacatcctccgtttcgcctctccgatcgccgcgacggcggcattcgtgctgttttggctccacagcaaggaaggtcaggcgacggccgacgtcgtgatcacctatgtcctgctggccggcatggtcgtcctggacatcaaatggcttctccgagcggtggcgtcgacatggttctactcgttccttgatgagaggccacgatcgtggcttcatcatgcacttctgtgctcagggaaatggcgactgatccgtcgcctcatcgtgtctgatctgaatctgtttcggatccttgacaataataagaagccaactagatacaggatgtggtcacaaaccattggacagtacaacttgttgcacgagtgcactcgctacgagagcgaggcaaggaccaagaactggaagagcggcatgttcaagcggttagcaccggaggagaactggatggagtacgaataccagcgcatgaggggcaatcatattgattcaagagatttcagggacgagttgttcaactctatctggcaagtcttgaagaaacccttcccacaacgacgaccaccacgacaaataatagtgacggaggcctggaggcctgcaccggcggctcctccatttacacatgctcatcaggaagcagaccttgccctgaagttcactcctgatttacaagagaccattcttatcttgcacatcgccacggacatattcctcttctcagcggaatcagaaattgaagcatcgcccaagtccaaaaaggatgtggaggtgatcaaggcgttgtcagattacatgatgttcctcgtcgcggtgcggcccgggatgctaccgggcctcgtcctcagtagccgatatgaagctgtcagtgaggctcttgccggaatatggaaggagaaagaaggtagtgatccttccttgcgtactagctcaatgatgagagagaaacgtcttgccgagatcctgattgccaacgaagatgaggagggaaattacttccaggtggacgattcgaggccccaaagcggctttctgagtgttctttacgacacgagtaatgttctatcagagggagctatactagccatgtttctgctacctaggataagaggtcctaattttagaaagaatatcattgaaaaagttggagaacacggcgacggcgagcccccaatactaaagaaatttcaccggcagtttccggatttgatggaattcgctaagaatgtctcttttccatcaatcgcaatgacgacggatgccatcatcggggagtgggcacgtcagctgattaacgtgtccatccgatgtacaagggattctcatgccaagcagcttgcccgtggtggtgagctcacgaccgttgtgtggatccttgctgaacatgctcgcatacttcgcatcaaaacagaaaagaaaccagctagctacgacgcagtataggcattcatgcatgtctctctccctactgaactgagagataactacagagtctcagatggatatactgtttgatctctcctttgtgtatctgtgtgatccatcggcctgtagatggttgtagttaattactttgcagggttctcatttattctctagacttaactaacctgtgtaccctctaaattgtggtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0147200, RefSeq:Os04g0147200