Os04g0150300

From RiceWiki
Revision as of 10:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0150300| Description = Conserved hypothetical protein| Version = NM_001058648.1 GI:115457025 GeneID:4335022| Length = 4823 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0150300

Description

Conserved hypothetical protein

Version

NM_001058648.1 GI:115457025 GeneID:4335022

Length

4823 bp

Definition

Oryza sativa Japonica Group Os04g0150300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:3456851..3461673

Sequence Coding Region

3459946..3461673

Expression

GEO Profiles:Os04g0150300

Genome Context

<gbrowseImage1> name=NC_008397:3456851..3461673 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:3456851..3461673 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctggatggatggttcgcacggtgttcttgctcaattcgtgggtaatccgggcgttggtagtattcagcttcgcagcgcacgtcaccatcgtcttcttggccggagtccgccgtcgtagggctattggcttgccgataaccatcctgtgggcggcgaaccagctgggccggtgggccgcgacgtacgcactcagcaagctcgccctcggcagcacgccgcaggagctggagctggtgacgctctggggggctttcctgctgctccatgccgctggtccggacaacatcaccgcctactccttggaggacaatgttctgtcgacgcgccagaaggtagaaatgatcttgcaggtatcaggagcagcatttgccatgtacaagaatatagtcatcagaagcgggtccggtacgatggtctggatctcttctttcatgttcatcatgggcatttttaagtattgggagagggcgaaagctatgcagctcgccaacctagaaaacttgcgaagctcaatcaagaagaagaaggagacaaggagacgacgaagcttgagaaatattaggcgtccaagcagttcaaagcatgataatgacgaggaggcactgctggttgctcatggcctgctcgacatcaccaaaggcgccttcgtcgattcttcaatcaacgagcatcaaatccctgtctatgctggcaggagacgagagatatttcctaagagtggctgggggatgatgtacaaggtggtcgacatggagctctccctcatgtacgacattctctacaccaaggcggccatggtgcacacctggcatggctacgccatgcgtgccgcctctccgttcgccacatccatggccttcatgttgttttggtttgacagcaagcaaggtcagcggatgaccgacgttttgataacctatgtcttgctgggaggtacagtcctcctagacatcatatggcttctcagagcagtggcatcaacatggacctattcgttcctcaatgataggccacacctgtgggttcatcacgcgttattgtgctctgggaagtggcgccagctccatcgttccattgtctccctggatccgtcattgatcctcgccaaggaaccaagtagctacaggaagtggtctggaaaaattgggcagtataacttgttgcacgagtgcactcgtgacaaggaccaaaggaccagggaatacttgagctctgtggtgaagaaagtagcatcggagggcatgtggatggagtacgagtaccacaacttgaggggtattcatatttcacaggatttcaagaagaaatggttggattgtatttgggactatatgtatttagcatacccagttgaagacatggaggaggtggaggaggaggagaagaagaagaaagaggcggagaagaagccaaaactgctgatgatgcttcctgagcatcacaatgttgagaacattcggaaattggaagaagctctggattttcttcctgaatttcaggagtccattcttatcatgcacatcgctacggatattgtcttcatgtatactaaatttgaacaaaatgcagcatcgtccaagtccaaagacaatgtgaagatgatcaaggccttgtcggattacatgatgttcctcgtcgcggtgcgacccaccatgctacctggtcttaagctgcgcagcctgtacgaagctactaaggaagctcttgccaaaatatggtctaag</cdnaseq>

Protein Sequence

<aaseq>MPGWMVRTVFLLNSWVIRALVVFSFAAHVTIVFLAGVRRRRAIG LPITILWAANQLGRWAATYALSKLALGSTPQELELVTLWGAFLLLHAAGPDNITAYSL EDNVLSTRQKVEMILQVSGAAFAMYKNIVIRSGSGTMVWISSFMFIMGIFKYWERAKA MQLANLENLRSSIKKKKETRRRRSLRNIRRPSSSKHDNDEEALLVAHGLLDITKGAFV DSSINEHQIPVYAGRRREIFPKSGWGMMYKVVDMELSLMYDILYTKAAMVHTWHGYAM RAASPFATSMAFMLFWFDSKQGQRMTDVLITYVLLGGTVLLDIIWLLRAVASTWTYSF LNDRPHLWVHHALLCSGKWRQLHRSIVSLDPSLILAKEPSSYRKWSGKIGQYNLLHEC TRDKDQRTREYLSSVVKKVASEGMWMEYEYHNLRGIHISQDFKKKWLDCIWDYMYLAY PVEDMEEVEEEEKKKKEAEKKPKLLMMLPEHHNVENIRKLEEALDFLPEFQESILIMH IATDIVFMYTKFEQNAASSKSKDNVKMIKALSDYMMFLVAVRPTMLPGLKLRSLYEAT KEALAKIWSK</aaseq>

Gene Sequence

<dnaseqindica>3096..4823#acatcactacatcagagcttgaagctctcttctctctctctacttgccatgtccggccatggctgccaccactcgatctctcttatcggagcattgccggccaagccctcgcgccaatatatttgcctcgacgaggagaacccatttcacccctttcccccaacccttccaccttgagttaagccaccaccgccagctcccaaatcggccgaaccaagcacttgccgccggcgttccggtctcctccctctccctctccgccagccaccgccctccctaggtgcgtggcgctcgggaacaccacccaccgacggcgtcgtcgccttccgcccgccggagagccagcgcccctcctctccttctcctctgttgctcggctggaaagagaagaaaagaagagaggaagaagaagatgagaggagagagaaaaagaaaagaaaaagaaaggaagattgacaggtgggcccttcaacagtaaattttcgtaattttcctatttaatgtgaattccaaaatttagaagcccatatcttttaaaatataaacccaattccagtgaaacttggaccaaaattcttctaaaatctttctctattttttgaggctatttttgctattttatcattttatttcattttttcctatttttggattttattcgaatttcttttgaatttgaattttacaagcttaaccctaggtcttgaggagtctcctaacctattagataatctcaatcaatctcaggacatcgagcaaggcaagttactatctaccttttgatcatttaagcctatattttacaaattatttatttatagccttctattcaacactctattttataggcataattcaaccatagaacccagataatttagtattgcttatcttgcttacaatttggttaaaatattttatacttagattgggacagtacgtaagaattggatgatttccgggtggctagtactgtctcgatcgatatagttattaccaggtagttatgtcaaacgaacgggtacgactgcagtttctagaatggggacagacctagttattatgttaattagcaatatggcacctctgtatagtggttcttatttttaagtcctcgcgtatgaggcaactatagccgtgaagggcaacttttaaccattaccatgtacaagtaaatggttcgtgatactcgagtataaattatatggtatattctaaaccctgatcgagatgacgtggtgtcatccagaactccttttgctgcaattaacattacgttcagagcatatgaggatataagttcatggaacaggtgccacaattgttaataacctaatactgggccatgactaaagctgatgattatcagcaagtcgtggactgcgggtaaagcgtacatctgctgcagtagaatatcattaaaactattcaaatagccgtgcacacggaattgagtatcgggactcatatggtaccctggttagaaacctaaagtatatgttttacaaactcttgctttaatatttctagattgtctattattgctttctgcaaagaactccactccatgccaacgcataacatatttccatggtaacttgctgagtattccgaatactcacccttgctcttattaaccctttttcatatttgggtcaagaggaggacccctgtgattattattatgatgactgataacttagaaaatccctagaggttataccttcctagtcagaatgtactagaacttccgctgtgtaatattagcacatatgtttaattaggtaagtacctacccttgtaaaacccctagtattgtaaactttaacgtatgcaatgaagaaccagctgtattacatgtatcaatatttattgatccagggattgatacattaatcaaagtcggatccaagttattagttttgggacccgacaagagccgttcagagtcgccggttccgttcgccggtttcggttgttcattcgagtgttcccgtgtcacataaaattgactcgttgggtcagtatctcgtgaggcccgctcacccgtcaggtctcctgcaggggcgagggcggctcaggttattcacccggtggccaatgcgaggccgggagcgaggggaaaatgcgggggcgttcctgcccaacccggtccagccccgccccgctgccacccctaattgccattgggaacatgtaccatgttcataccattacttgcctggtatcccacatgtacattaattaaaatataaccatcaggtttataccatggtcactatccctcgctcagctctcgatcagtggctaacctacaatctctgaatatttttcagacgtgaacagtaactgaagaactgaaacgaagaacagagtttttttggtgctgcgtaaccacctgcagcttttctgatttctcttcaatttattccctcatcttgtgaggttgttacatgcataacaaacaccgatttcaccggatccaaacgagtgaacgcgccatccgacgctccagatctagttctatcgatactaacagaaaaaacgggaaaaactcagctgcccaagactgaatcttcctgggacagccgttacaatgcatgcagcatcctatgcctaagaattcaaacttactaactgaaatcaaacaaattattgcaaatgcacaagattatcttcaggctaacacgctaacggtatataaatagggacacataatatgtcattgtttatagagtcaactgattaaaaagatagatcaggttagcattgagtgtgagctataagcctgttgggctaatgaaatgtaaagcacatgcatagacgctaattaaatgtaaagcgtatgcagaaacacaaccggccactaagttcagatcttgtcccgtgttcttctttcagttgtatcttccaatatctcaggcttagtccgtcagtgatcaactgcaaagtgcatactcgccatcagattccaagagcattcggtacgccctgtctatttctcgtaatttatctggttttgtgtcctggatttatatggtttttttcatcaatattaattcttgctcaactaacacacgtgttagcatcagacgatgcctggatggatggttcgcacggtgttcttgctcaattcgtgggtaatccgggcgttggtagtattcagcttcgcagcgcacgtcaccatcgtcttcttggccggagtccgccgtcgtagggctattggcttgccgataaccatcctgtgggcggcgaaccagctgggccggtgggccgcgacgtacgcactcagcaagctcgccctcggcagcacgccgcaggagctggagctggtgacgctctggggggctttcctgctgctccatgccgctggtccggacaacatcaccgcctactccttggaggacaatgttctgtcgacgcgccagaaggtagaaatgatcttgcaggtatcaggagcagcatttgccatgtacaagaatatagtcatcagaagcgggtccggtacgatggtctggatctcttctttcatgttcatcatgggcatttttaagtattgggagagggcgaaagctatgcagctcgccaacctagaaaacttgcgaagctcaatcaagaagaagaaggagacaaggagacgacgaagcttgagaaatattaggcgtccaagcagttcaaagcatgataatgacgaggaggcactgctggttgctcatggcctgctcgacatcaccaaaggcgccttcgtcgattcttcaatcaacgagcatcaaatccctgtctatgctggcaggagacgagagatatttcctaagagtggctgggggatgatgtacaaggtggtcgacatggagctctccctcatgtacgacattctctacaccaaggcggccatggtgcacacctggcatggctacgccatgcgtgccgcctctccgttcgccacatccatggccttcatgttgttttggtttgacagcaagcaaggtcagcggatgaccgacgttttgataacctatgtcttgctgggaggtacagtcctcctagacatcatatggcttctcagagcagtggcatcaacatggacctattcgttcctcaatgataggccacacctgtgggttcatcacgcgttattgtgctctgggaagtggcgccagctccatcgttccattgtctccctggatccgtcattgatcctcgccaaggaaccaagtagctacaggaagtggtctggaaaaattgggcagtataacttgttgcacgagtgcactcgtgacaaggaccaaaggaccagggaatacttgagctctgtggtgaagaaagtagcatcggagggcatgtggatggagtacgagtaccacaacttgaggggtattcatatttcacaggatttcaagaagaaatggttggattgtatttgggactatatgtatttagcatacccagttgaagacatggaggaggtggaggaggaggagaagaagaagaaagaggcggagaagaagccaaaactgctgatgatgcttcctgagcatcacaatgttgagaacattcggaaattggaagaagctctggattttcttcctgaatttcaggagtccattcttatcatgcacatcgctacggatattgtcttcatgtatactaaatttgaacaaaatgcagcatcgtccaagtccaaagacaatgtgaagatgatcaaggccttgtcggattacatgatgttcctcgtcgcggtgcgacccaccatgctacctggtcttaagctgcgcagcctgtacgaagctactaaggaagctcttgccaaaatatggtctaag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0150300, RefSeq:Os04g0150300