Os04g0151900

From RiceWiki
Revision as of 10:57, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0151900| Description = Protein of unknown function DUF1637 family protein| Version = NM_001058651.1 GI:115457031 GeneID:4335026| Length = 6...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0151900

Description

Protein of unknown function DUF1637 family protein

Version

NM_001058651.1 GI:115457031 GeneID:4335026

Length

6159 bp

Definition

Oryza sativa Japonica Group Os04g0151900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:3566994..3573152

Sequence Coding Region

3567377..3567501,3567595..3567807,3568329..3568476,3568620..3568783,3570353..3570452

Expression

GEO Profiles:Os04g0151900

Genome Context

<gbrowseImage1> name=NC_008397:3566994..3573152 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:3566994..3573152 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaaaaataaagagcctgtctaatgcttgtaaagtatcattttctccggatgggcccatatccgatgaagcacttgagagagttcgtgcattgttagatgagataagacctatagatgttggcctagacaatgaagcacagattgctcgtaattggaataattcaacgcgtcaaccaaatggaagaagaggacgtaatggggctaaccagttcacatctccaatcaaatatttacacattcatgaaagtgaaagtttctctatgggtatattttgtatgccgccgtcatcagttattccacttcacaatcacccaggaatgacagttctgagcaagcttctctatggcacactgcatgctgaatcttatgattggattgatgtaactgatccaaccgatcaattacaggaactttcagtgagaccagcaaggcttgtcagagaccgtgaaatgtctgctccagagaccaccattctttatcccaatagaggtggtaacatccacactttcagagcgatcacaccttgtgctctctttgatgtcctttctcctccttattctgctgagaaggggagggactgttcatacttccggaagtcttcagtaagggaaacaccacctgttgttttgcctggtgaaataaatagcgcagaagtaatttggttggaggaattggaggaccatcaacctccagagggctttgttgtcgcgagaggtttgtataaaggccctgtaataaggagatag</cdnaseq>

Protein Sequence

<aaseq>MPKIKSLSNACKVSFSPDGPISDEALERVRALLDEIRPIDVGLD NEAQIARNWNNSTRQPNGRRGRNGANQFTSPIKYLHIHESESFSMGIFCMPPSSVIPL HNHPGMTVLSKLLYGTLHAESYDWIDVTDPTDQLQELSVRPARLVRDREMSAPETTIL YPNRGGNIHTFRAITPCALFDVLSPPYSAEKGRDCSYFRKSSVRETPPVVLPGEINSA EVIWLEELEDHQPPEGFVVARGLYKGPVIRR</aaseq>

Gene Sequence

<dnaseqindica>5652..5776#5346..5558#4677..4824#4370..4533#2701..2800#ctgcgcctcctcctcgccgccggttccgcccctctctcgcctcgcctcggccctccatccccccgcctcctccgcgggtcgcaggtgagccaccaacctgccatcgtcaccataatcatctccccgtcctcgatttctcgttttttttttttgggggattagcttgtgtgtcagaattggtggtagctgcttcgatctgattgtcgtgtgtgctcgcgttcggggaggccgtgtgatctgttaactccctctgcgcgtatagatctggatcgattgggacggagagggaggaggcgggtggacagcttccgttactttcacttttttgctggtgcaaaggaggtttagagcatcaccaacagtgcccttatttcatccccaattctgggtagactgtacacattttgttcgtgatactattagtttctaactttctattggtacggtgattagctttgggaccgtgaaggatcatgcacatttttagagttatatatgtttgcttgtatagagctcgctcgcgtttgttttgttttatttagtgcttgttcgtctggtttcctaattttatttttaccctgtaccatgtgcgtgttgttcttttgcttttgcttatactgattctgcgtgtctcctcaatttggatcagggtgtcgcgcttggacgaagggcagcttttcacagcatgacttaaaagtggaaatgagtgcacatcccaaaaacgattgcttgatttgcagttcttggagctgtgcactactattttgtccaatttcactacatctgcctcttgtttgagaggtattgctgcttccacttatgcctttgttataagttacaacctgtgatgtgaaaaacagcatatacttcaacattttttttagataatggaaatggattacatctccggcctttgccaatgggtacacaaccaaaaggtcttagaagtaaaaaggagaaataaaatgaaagaggtgatgggacaaatcccaattcctgccaatgaaaagatgaattgaaatactgtttccaaaatcacatatattctaggcttctagcacgaaattttataggtgctacgccatccaaacttcaacatatttgcatatacttcaacatatatatttgtgcaattaaattcaaggattcacttatacagatgctcgtggagtcaatctaaactattctacttcacccttgaccttctactgtcatgttaaattttatgagttacctttcaatattctcttaggtggttctgccaatagttttctgtatataattattcatatttacatttttttaagataaatggctttcggctagcttttactgaaagcatacgagtttgatacaaaagaaagaaaaaacaaaagctggggttgccagcttttaacatattaaattgttggcataatcatatttacatcacaactaaattgttgtgttgataatcttgtcctcttgtgtgcgtcctatccccacaccacgacgccgtggaccatcagcggctgctcgccatgcggacgaggctgacggagagtgaagaggagtgcccttggagcctagaagggtagtattagtagaagcctaggtagggtgaggactggaatgaggaggaagaagaggaggcgaggcaaattaggggttctccaaatcgagtcattagtaagccttttctgccgctcaaattttattttatttttttcaatcgcatgatagtgtactaggtgctgctgcatgtgagccccactgtgctggcgcagccaagtgccatggtacgggtcaacacaacgctcttctcatcacacgcgggcccctcgggaggaggctcccattctctccttgtgctcggtgcacgcgacgctactgaacttatgaggggggtgcgcccaattcacctgccctgggcgaccgcggcctcatcgtttgtctgtcctcggtctcatttcgtggtgcgtatgtgaggcgctgggtgtgtgggtggatctgggtccagttttagctgtctcattgctccgatgccagtggggtgtttgatgaaatgccgatcgcgtcgcggcgacccctgagcgggagttctcgtcggggatggggatggatttgcctgtttgtgtttagtcggtatgcagtcgcagcgagcgcggttttccgtgaatctgcgcggccatgaattttagggcgtgattgggtagtctgctagttcataggtttaagaggaccttactggctttaccctatgcagacatccctttaaactgtgaatgcggaccttttttgagatggctcgaaatttagtcattccgttggatcttgatgtctaactgattacacatcaatgtggtatactcattatcgtcatccgaatttaatacgagttcagcatttgctatactacatttttctagatatgatgatttttcttcaccgcatatcgattaagcgatctaaatcttgtaaaatatgttttgttaccccaagttctcctatacttttcacacaattctttttgtttttaggggtctattcatgtctaatgtcataagatactttgttgcctgtgtaggtgctaaaattgacagcctgtgctttatcgccacaactgtggggatccgttgagcaattatcacgttccaaattcactcagtcttttgaaggtttgacaattccgatattctcaatagcacatcgaagtgcaagatgccaaaaataaagagcctgtctaatgcttgtaaagtatcattttctccggatgggcccatatccgatgaagcacttgagagagttcgtgcattgttaggtcagtcaaacttatataatttataatctttggtagtaatctcacctttccaagcatatttttcatcctgaactcaatattggaatagtttatgcactcttgctaaaatgtttgttttggaagaaagatctctgttgcttgaatgtttgttatggaagacgaccatcttgctatgaatttaaagatttgtcatttcgtgctgcaatggcatgttttttgctgctaaaatggcatgaatttaaacttgcttaaatggtgattagcaagttttgaaataactctataggttccggatttatcggtgatggcaaatcttgtcctcttgtgtgcagttcgcttgatcttttaagcatttttttagttgcagagtggtttagctgggcctgatattcagccaaaatcaaaaaggttgagcacacaataatattgtcgtaaagaattctgttgaaatgttggtatcactgtagagctaggcttgtaagcacttttggcatgtagccaagtactctgaagttcaacttcagaagaatacacagcaatgtccttgacccactatgactattgtggcggtccttcttggttattctgtaaaccgagttatattgaattcttcagcttatttatagattcttgtgttccttgcaagtagtattcctactttttatttttattagtagaatcttgtatataatttttggttcatgtggctcaaattgggtttcatctcttgtttacctcaacatgcttgggactaaaagctcttgttgaatccttcgctagtcataggtgctcacagcagtggtgccctttgtgcttgcattattgattctttgctgctgtgcatgcatgattcttgatttacttcatgtcttgtacaattttgtattggtgaacaagccatctgcaactagttttcttatttcttgttatgagcaacattttttccatcacaattatgatggctggatgagtaatttaaattgttggatgttggtgatttcatagttaactgtagatcatcctctgtcatatctctattttacttttaccattttgggctgctattttgcacggtagattctattgtttgaaacaagtctccgacttgcttttcctagttactagttcttttaaacaatagcaaatgttcaagcattgccaagatataaaccagtaacttttgagatgtagattttctcatagtcttaatggttattattaccaattaagaagtatgtccaaccatgtaactaggacgatttatctctgcctgtagtatgagttgattaatttgatttatttaatgctgatgcctgacagtataccttactgctagttccatgcattttatctctgccagattgttaatatcatgattcaagagcaagatgttactgtttgcttagatatctcattaatctgcatattctattagagcttgcaatgtaagatttctctgagatagttcaatgcaaatgtaggataaaaataaaacttactgttgatctgattcagtgtaatccaatgcttcagcagacttaaatttttaagtttgtttaattttcccagatgagataagacctatagatgttggcctagacaatgaagcacagattgctcgtaattggaataattcaacgcgtcaaccaaatggaagaagaggacgtaatggggctaaccagttcacatctccaatcaaatatttacacattcatgaaagtgaaagtttctctgtaagatatcatcatcatttttttaagatcgtgatgttttttatttgaactgttctgtaagtactttgaggctttaaaattagtagatagaacactcctgtgtttcagcatctgatgaacactaaatttttcaatatatgtagatgggtatattttgtatgccgccgtcatcagttattccacttcacaatcacccaggaatgacagttctgagcaagcttctctatggcacactgcatgctgaatcttatgattggattgatgtaactgatccaaccgatcaattacagggtgagctttgatgtttgaattcatgttgttcacttattctgccacataacagtagttgtccatatttaccatctatttgtttaatcctttcaatggatgaccaatagtccaattactggctacttcaaatcagttgtttttgcacaactcagttgagcttgtttctatgttgatatgtaaaggtgtgcagagcgcaaatagatatcatatgtttcagtatatcatatctagcaaacatgtttgcaattaagcatgagcctttaatcttgccattgaagtattaaaacccccgttttctatatacactttgttttttatccaaaatttagcttggtttcttaaatacctcatcttaattacctgtctgtttgactaaacaaaatctaattgttctttcaaagtacttcccaaaatgtcattttcagcaactactcatttatgctctactgtcatctgcttctacttacacggcaccttctatcggtgactgataacatggtatttttattcataccctgcagaactttcagtgagaccagcaaggcttgtcagagaccgtgaaatgtctgctccagagaccaccattctttatcccaatagaggtggtaacatccacactttcagagcgatcacaccttgtgctctctttgatgtcctttctcctccttattctgctgagaaggggagggactgttcatacttccggaagtcttcagtaagggaaacaccacctggtatgtagagatcttataacttgaacttgttattacaccactgctgagcgctgttctaactcccgccccccaccccgtccgatattcctccagttgttttgcctggtgaaataaatagcgcagaagtaatttggttggaggaattggaggaccatcaacctccagagggctttgttgtcgcgagaggtttgtataaaggccctgtaataaggagatagttaggttcgaagcacgtctgtccacgaatcacgaaccagttgacgatgcagctaggttcctagctagtatctgtgtcatgtgggttagtatagagcaatgcatcgttgagtcactcatctgcaacctgcgatttactctgtacatgtcaatgcaaagtgatctggtgaagatttaactgccaggttacaaaacaagaacgaaaaacttttatggttgacagccagatgttgttctataacatagttgagtggccccccctatcagctggaggttgttacttttttttgtgtcgacttgcagagcgccttgtcatgctgtattaggtaacctcaacggcagaaccttttcacctattgatgatttcagaaattgagttggtgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0151900, RefSeq:Os04g0151900