Os04g0162600

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Revision as of 10:58, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0162600| Description = Protein of unknown function DUF295 family protein| Version = NM_001058662.1 GI:115457053 GeneID:4335040| Length = 13...")
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Gene Name

Os04g0162600

Description

Protein of unknown function DUF295 family protein

Version

NM_001058662.1 GI:115457053 GeneID:4335040

Length

1354 bp

Definition

Oryza sativa Japonica Group Os04g0162600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:4300845..4302198

Sequence Coding Region

4300918..4302129

Expression

GEO Profiles:Os04g0162600

Genome Context

<gbrowseImage1> name=NC_008397:4300845..4302198 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:4300845..4302198 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcgcgccgccgccgtcgccggcggtggcgaggacaggattctccgacctccagccagacctggtgggcgagatccatggccgcctcagcttcctcgaccgcctagccttcgtggcggtctcctccgccgcgtcacgcgacgcgttgaagccggagccgccgtggctggtcctcccgggcgagactccggagaccgccacggtcttctccctcgccgaccgccgctccgccaccgtgcgcgcctcgggacccgcgatgcgcggccacgtcatcatcggctccttcggcggctggatcgtgaccgccgacgagcgtgggcggatgcgcctcgccaaccccgtcaccggcgatcagggcgacctcccggccatcaccaccatccccttcgtcaacgccacctcgccgtggggtcaccatttcatcatggacatggaacccttcgtccacatccggtacagaggcgaccacgagtcgtggccgcacccgtacggcacgttcacacacaccgccggcgacatccgcctctggttctaccgcaaggtcgtcctctccgcctcgccgcgccccggcgactacgccgccatgctcctcttggacagctacttcggcgcgccggcgttcgccacggcgggggacggccggtggagggtcgcgccctcgcgcgacggcgtcgaggacgcgatccaccacgggggcaagttcttgtccgtcacgtacaccggcatcgtggaggcgtgggaacgcgacggtgtctccggcgagttcaccggcaaggtggtgaccacgccgatctcatgccccccgcagcgccgcaagtacctggcggcggcgccggacgggcggctgatgatcgtgctcaagaacaccaatggcggcgtcaagaaaggctacttcgaggtgcaggtgttcgacgaaatgacgcaacggtgggaggcggcggaggacatcggcgagctcgctatcctcgtcggcgtgaacagctcggtgtgcgtgtcgacggcgaaacacccggagctcaagggcggatgcgtgtactacactgacgacgagatcgggaaggcatggctgcggagagagtacgggtacagcaacagcaagccgaacgtgggggtgtacagcctcaaagacggcaaggagatgagcatcccggggctcggcgagcacctcagctggccgccgccggcgtggttcacgccttccttccggtga</cdnaseq>

Protein Sequence

<aaseq>MRAPPPSPAVARTGFSDLQPDLVGEIHGRLSFLDRLAFVAVSSA ASRDALKPEPPWLVLPGETPETATVFSLADRRSATVRASGPAMRGHVIIGSFGGWIVT ADERGRMRLANPVTGDQGDLPAITTIPFVNATSPWGHHFIMDMEPFVHIRYRGDHESW PHPYGTFTHTAGDIRLWFYRKVVLSASPRPGDYAAMLLLDSYFGAPAFATAGDGRWRV APSRDGVEDAIHHGGKFLSVTYTGIVEAWERDGVSGEFTGKVVTTPISCPPQRRKYLA AAPDGRLMIVLKNTNGGVKKGYFEVQVFDEMTQRWEAAEDIGELAILVGVNSSVCVST AKHPELKGGCVYYTDDEIGKAWLRREYGYSNSKPNVGVYSLKDGKEMSIPGLGEHLSW PPPAWFTPSFR</aaseq>

Gene Sequence

<dnaseqindica>70..1281#agatcagtaatctgcgtacgctcctatcgcctaaccctataacgtaatattcgagaaatcgttccggcgatgcgcgcgccgccgccgtcgccggcggtggcgaggacaggattctccgacctccagccagacctggtgggcgagatccatggccgcctcagcttcctcgaccgcctagccttcgtggcggtctcctccgccgcgtcacgcgacgcgttgaagccggagccgccgtggctggtcctcccgggcgagactccggagaccgccacggtcttctccctcgccgaccgccgctccgccaccgtgcgcgcctcgggacccgcgatgcgcggccacgtcatcatcggctccttcggcggctggatcgtgaccgccgacgagcgtgggcggatgcgcctcgccaaccccgtcaccggcgatcagggcgacctcccggccatcaccaccatccccttcgtcaacgccacctcgccgtggggtcaccatttcatcatggacatggaacccttcgtccacatccggtacagaggcgaccacgagtcgtggccgcacccgtacggcacgttcacacacaccgccggcgacatccgcctctggttctaccgcaaggtcgtcctctccgcctcgccgcgccccggcgactacgccgccatgctcctcttggacagctacttcggcgcgccggcgttcgccacggcgggggacggccggtggagggtcgcgccctcgcgcgacggcgtcgaggacgcgatccaccacgggggcaagttcttgtccgtcacgtacaccggcatcgtggaggcgtgggaacgcgacggtgtctccggcgagttcaccggcaaggtggtgaccacgccgatctcatgccccccgcagcgccgcaagtacctggcggcggcgccggacgggcggctgatgatcgtgctcaagaacaccaatggcggcgtcaagaaaggctacttcgaggtgcaggtgttcgacgaaatgacgcaacggtgggaggcggcggaggacatcggcgagctcgctatcctcgtcggcgtgaacagctcggtgtgcgtgtcgacggcgaaacacccggagctcaagggcggatgcgtgtactacactgacgacgagatcgggaaggcatggctgcggagagagtacgggtacagcaacagcaagccgaacgtgggggtgtacagcctcaaagacggcaaggagatgagcatcccggggctcggcgagcacctcagctggccgccgccggcgtggttcacgccttccttccggtgatgatatatagttagttcttggcctcttcatggtcttctacatacataatgtttacatcttcagctttgctttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0162600, RefSeq:Os04g0162600