Os04g0165200

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Revision as of 10:58, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0165200| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001186831.1 GI:297722792 GeneID:9271610| Length = 285...")
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Gene Name

Os04g0165200

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001186831.1 GI:297722792 GeneID:9271610

Length

2852 bp

Definition

Oryza sativa Japonica Group Os04g0165200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:4416578..4419429

Sequence Coding Region

4418218..4419333

Expression

GEO Profiles:Os04g0165200

Genome Context

<gbrowseImage1> name=NC_008397:4416578..4419429 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:4416578..4419429 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatccacaggagttccaattcttccagggggtggagcaagagatgctcttgctatcccatggcggtggcggcgcggcggcggctgcctcggacgacgtgctcgcctaccatgtcggggtgctaagggacaaggtgcagcagctggagccgctggtcggcatggtcgtcgtctcccccgccgcgccgcacggccagctccggcgcgacgcggcggcgatggcggcgtcgagcgcctgctccgtcctgcaggagataactgccgccgcctccgccgtggcgcaccggctggagcaggccaacgccgcctcctccgcctccttcaggcgaggagtggctttcgccgacgacgcacacgccgccggtggcgtgcagatgttcgcggcgggcgcgcacggcggcggccaaggcggtgatgacgaagccggcgcctcgctgttccaccaccacgggccgccggccgtcggcgcgcccaccgtgttccgcgccggcgccacgacgacggcggccgcgtcgagcagcggcggcggagacgacgacggcgacggcgacggcgaggtggacgtggtggagctggaggcgtcgtacctgctggcgaggtacacgcactactgccaggtgtgcgggaaggggttcaagcgcgacgccaacctgcggatgcacatgcgcgcgcacggcgacgagtacaagacggcggcggcgctgacgagcaccggcgccggcatgagggcggcggcgaggcggtgcagctactcgtgccccgcggaggggtgccggtggaacaggcggcacccgcggttccaggcgctgaagtcggtggtgtgcgcgaagaaccattaccggcggagccactgcccgaagatgtacgtgtgcgggcggtgcggcggcaagcagttcgccgtgctctccgacctccgcacccacgagaagcactgcggcgagctccgatggctctgctcctgcggcaccttcttctcccgcaaggacaagctcatgggccacgtcgccctcttcgccgccggccacgcccccgtgcccgtcgcgccggaggcgtcgccgtcgacgacgaccaccggcaccacgacggacagatcacgtacgggattgattgattaa</cdnaseq>

Protein Sequence

<aaseq>MNPQEFQFFQGVEQEMLLLSHGGGGAAAAASDDVLAYHVGVLRD KVQQLEPLVGMVVVSPAAPHGQLRRDAAAMAASSACSVLQEITAAASAVAHRLEQANA ASSASFRRGVAFADDAHAAGGVQMFAAGAHGGGQGGDDEAGASLFHHHGPPAVGAPTV FRAGATTTAAASSSGGGDDDGDGDGEVDVVELEASYLLARYTHYCQVCGKGFKRDANL RMHMRAHGDEYKTAAALTSTGAGMRAAARRCSYSCPAEGCRWNRRHPRFQALKSVVCA KNHYRRSHCPKMYVCGRCGGKQFAVLSDLRTHEKHCGELRWLCSCGTFFSRKDKLMGH VALFAAGHAPVPVAPEASPSTTTTGTTTDRSRTGLID</aaseq>

Gene Sequence

<dnaseqindica>97..1212#ttatgcaattgatgtcctttgaatctctagctagctatatagttgcaaattaaaccctagaattaagctggattagctagctaattaattagccgaatgaatccacaggagttccaattcttccagggggtggagcaagagatgctcttgctatcccatggcggtggcggcgcggcggcggctgcctcggacgacgtgctcgcctaccatgtcggggtgctaagggacaaggtgcagcagctggagccgctggtcggcatggtcgtcgtctcccccgccgcgccgcacggccagctccggcgcgacgcggcggcgatggcggcgtcgagcgcctgctccgtcctgcaggagataactgccgccgcctccgccgtggcgcaccggctggagcaggccaacgccgcctcctccgcctccttcaggcgaggagtggctttcgccgacgacgcacacgccgccggtggcgtgcagatgttcgcggcgggcgcgcacggcggcggccaaggcggtgatgacgaagccggcgcctcgctgttccaccaccacgggccgccggccgtcggcgcgcccaccgtgttccgcgccggcgccacgacgacggcggccgcgtcgagcagcggcggcggagacgacgacggcgacggcgacggcgaggtggacgtggtggagctggaggcgtcgtacctgctggcgaggtacacgcactactgccaggtgtgcgggaaggggttcaagcgcgacgccaacctgcggatgcacatgcgcgcgcacggcgacgagtacaagacggcggcggcgctgacgagcaccggcgccggcatgagggcggcggcgaggcggtgcagctactcgtgccccgcggaggggtgccggtggaacaggcggcacccgcggttccaggcgctgaagtcggtggtgtgcgcgaagaaccattaccggcggagccactgcccgaagatgtacgtgtgcgggcggtgcggcggcaagcagttcgccgtgctctccgacctccgcacccacgagaagcactgcggcgagctccgatggctctgctcctgcggcaccttcttctcccgcaaggacaagctcatgggccacgtcgccctcttcgccgccggccacgcccccgtgcccgtcgcgccggaggcgtcgccgtcgacgacgaccaccggcaccacgacggacagatcacgtacgggattgattgattaatcaacaatatattgcctgtgaaatcaattcagttcgttcgaatcaatagtgtgtgtacaactgtacatactacatataggtaggttcccatttcatgctcgaatttgaattcttaatcaatttgattggagctgagtaaatttcataaaacctcacttattacaatccaacttatacaaaaacatagggattttgacacgtggcagataactccaagtattatgatcctaaagttttataaaaccacacaccgctaaccaatttgatataccatgatgtcaaaatttgaaaatgctatatttatatgatgtagcatttaattatatgatggatctataacttataaatttgagatgcaattgtagaacttaaaagtgtggtagattaaagtcaaaatgattaatagtgtggttttgtgaaactttatagccataaatacctgggttttgtgccatgttttaaaatctctattgttttgtgcaatttagatcgtaatacatgtggttaggtgaaatttaatcatttgattatgtgccaatgtctcggtatctaaaagtaaaattagcttggtacttataactaatgctacatttgcaagttatcctatatacttaagttcatccccacatacatatatgtgccttgatttgtatggtgcatcgatcatagcatggatagtgtacaactaaaagcccacaaaaactctttgaaatattgaaatatctatactccttttaaaataaagtagtaaatggtggattgagtgtggtttagggtttattaacccttatggttttgccaccattctcatcaccaacttcctactttattttttaacagaaaaaaaaacagataagactaactagagggcacacatgttaataaagcccctcccaactttcattttccgtgagaagaaaaaaaaacggtgtagggttaaaggatttacatataagtaattaatatatgtagtaattaaaagatgatatataaaaggagtaatgattataacgggttaatatataattttcaattaaaatcctattacaatgcatatgctaggcatctaaaatggaagtgctggtgcacttctttgtccattttcatgctgtacgtgccttttctgctgctgccactgtcgcatgcaccttctttgtcgtccatatcgaaatgcaggatttaagatgatgtacaagaattcgacaacatttggtaggatttaaatttgaatctacaaaagttcctaaaaaagagaaaaaagggtgacatatgcacgtgaattttttgtgcctatccaaatgagagagattgagagaaaaaaaaaggaaagaataatgggctaagagtccattactatttattaggcctagaaagcccatttaggaggaaaaaaagagtcttttttctactttgttataatgaatgaatgttactattatggcaaagttaatgtaaaaattttctacagtattcctgcattttttagtttttctaaaatttcctacattattttacaattttcatgtattttatagattaccatcaattttcatgttttttgttagtttcacgtgtaaccgggaattatgactgtaaatccttgatttattaccagtatcgtagataattaatttgttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0165200, RefSeq:Os04g0165200