Os04g0165400

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Revision as of 10:58, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0165400| Description = Hrf1 family protein| Version = NM_001058667.1 GI:115457063 GeneID:4335045| Length = 2032 bp| Definition = Oryza sat...")
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Gene Name

Os04g0165400

Description

Hrf1 family protein

Version

NM_001058667.1 GI:115457063 GeneID:4335045

Length

2032 bp

Definition

Oryza sativa Japonica Group Os04g0165400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:4433670..4435701

Sequence Coding Region

4433890..4434271,4434353..4434504,4434594..4434692,4434794..4435003

Expression

GEO Profiles:Os04g0165400

Genome Context

<gbrowseImage1> name=NC_008397:4433670..4435701 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:4433670..4435701 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtacaacaattatggaaattctcctggaatgcagatgcctcctatagggcagatgcctcctgccgcagggcagatgccctcggcaaatcctcagcctggccaatttggcaatccattttatggtgcgagctcaggtctaattaaaactgggttaggagcatatggagagaagttccttggttccagttcggaattcatgcaaagcaatattaacagatacttctccaacccgcagtactatttccatgtgaatgatcagtatgtcaggaacaagctgaaagttatactgtttccgttccttcacagggggcattggactaggataagtgagcctgttggtggccgactgtcgtacaaacctccaatctatgacatcaatgcaccggatctttacatccctttcatggcattcggtagcttcattattcttgcgggctttacattaggtttcatgggaaagtttactccagaagctataaatctgcagttcagcagaggactcattggatgggccttgcagattgtgatcctgaaagggctgctctactcgatgggcggtggagaggtgccgctgctcgacctggtagcttatggcggatatctatttgccgggctttcccttgctgtcatctcgaggcttctgtgggcttactcgtacttcgttatgatgccatggatgagcctttgtatgggggtgttcttggtgaggacgatgaagagggtgctcttcacggagatgaggagcagcgagaggcactcgacgcggcagcactatttcctgctcttcctggcaatttcgcaattccccctgttcttctggcttggcaacataggtgcatga</cdnaseq>

Protein Sequence

<aaseq>MYNNYGNSPGMQMPPIGQMPPAAGQMPSANPQPGQFGNPFYGAS SGLIKTGLGAYGEKFLGSSSEFMQSNINRYFSNPQYYFHVNDQYVRNKLKVILFPFLH RGHWTRISEPVGGRLSYKPPIYDINAPDLYIPFMAFGSFIILAGFTLGFMGKFTPEAI NLQFSRGLIGWALQIVILKGLLYSMGGGEVPLLDLVAYGGYLFAGLSLAVISRLLWAY SYFVMMPWMSLCMGVFLVRTMKRVLFTEMRSSERHSTRQHYFLLFLAISQFPLFFWLG NIGA</aaseq>

Gene Sequence

<dnaseqindica>1431..1812#1198..1349#1010..1108#699..908#gaagaaatcgaagccgcgcttcccctctccgcctccgcctccgatctgctgcggcggcgcgatccggcagccggcgacctccctccgcctccttcccgaccctttcgtagctttctcaatcccctccccccctcctcgcggcgcgcgcacggccggctgagaaggtttccgagggggccgacctccttctaggtattggttgttcttccctcaatcttggctgattcatccgggcttgacttcgattaagattaagattaaccccgtccatgtatccggtttaatttactagtgatcttgttgaagaccttcgtgttaaattggtatatgagtgatcttgcaatggggattatattactagtgcttattggaaaaatatgtgctcagcgacgaatatggcacgcatatctcttcatttagaaattatttacattatgctacgctgtagaatgactggggtacccatctccgcgatgtgttttgtacaaaatttggcgcaggaataagtcgaatgatatgcctagtaattaagcaaaagagcttccttgtgtatacttgtgttatatgtcaagttcttccaatgtcatgtaaaagatttgtttcagtcgtttttctttgccccgcaaacatatgtaactatctaattatctatctatccatccgtttgaccaaacattcacttcttctttgttgcagccatgtacaacaattatggaaattctcctggaatgcagatgcctcctatagggcagatgcctcctgccgcagggcagatgccctcggcaaatcctcagcctggccaatttggcaatccattttatggtgcgagctcaggtctaattaaaactgggttaggagcatatggagagaagttccttggttccagttcggaattcatgcaaagcaatgtgagtagctagctagtgaagagccttgaccctagtgttttaattactcgctatcttattagttttgtcacactacctctgaatatgtattggttttgcagattaacagatacttctccaacccgcagtactatttccatgtgaatgatcagtatgtcaggaacaagctgaaagttatactgtttccgttccttcacagggtagttgcctcaccagaaacattttatacgaatcttgttctttgaactgctgtactgaaaataaacaagtatttgcaatgtcttctcaggggcattggactaggataagtgagcctgttggtggccgactgtcgtacaaacctccaatctatgacatcaatgcaccggatctttacatccctttcatggcattcggtagcttcattattcttgcgggctttacattaggtttcatgggaaagtgagttgtttttaaccatggttcttcaattgtgaaatacttcaaaacccattgcccctcatgtgattgacttctatgcaggtttactccagaagctataaatctgcagttcagcagaggactcattggatgggccttgcagattgtgatcctgaaagggctgctctactcgatgggcggtggagaggtgccgctgctcgacctggtagcttatggcggatatctatttgccgggctttcccttgctgtcatctcgaggcttctgtgggcttactcgtacttcgttatgatgccatggatgagcctttgtatgggggtgttcttggtgaggacgatgaagagggtgctcttcacggagatgaggagcagcgagaggcactcgacgcggcagcactatttcctgctcttcctggcaatttcgcaattccccctgttcttctggcttggcaacataggtgcatgaaaacatttttctggttgcggtttgtcggtataatagttaaaccgtggtgtttaggttcattgtaaaatagtttttcaatagatttcaacagcttgtgtcgtttgtccattagagtatgtttatcgacagggtttggtagatatgtgccgatgtaagtttatgagttcataactggatttatgttcgatctccgtaaaatatatatacaaaaattttgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0165400, RefSeq:Os04g0165400