Os04g0166600

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Revision as of 10:58, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0166600| Description = Conserved hypothetical protein| Version = NM_001058673.1 GI:115457075 GeneID:4335053| Length = 3868 bp| Definition ...")
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Gene Name

Os04g0166600

Description

Conserved hypothetical protein

Version

NM_001058673.1 GI:115457075 GeneID:4335053

Length

3868 bp

Definition

Oryza sativa Japonica Group Os04g0166600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:4535366..4539233

Sequence Coding Region

4537387..4537581,4537875..4538022,4538117..4538232,4538580..4538642,4538747..4538815
,4538941..4539015

Expression

GEO Profiles:Os04g0166600

Genome Context

<gbrowseImage1> name=NC_008397:4535366..4539233 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:4535366..4539233 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgatggagactgagctatgctcctcccgggttctgtctccgcctcggtacgagagtggcgatgaggagctctcggtgcttcctcggcacacgaaggtcatcgtcactgggaacaaccgaacaaagtccgtcttggttggcctacaaggtgttgtcaagaaggctgttggtcttggaggttggcactggctggttctaaagaatggtgtagaggtgaagctgcaaaggaatgctttgagtgtattggaacctccaactggtaacgaagacgatgatgatattgatggcaacaattcgttctgtagcagttccgacatgggagacaaagacatggactattcgagcatagagtaccacaaaccaacaaagccaagagttcggcatacaaggccctggtcttcctgtataaaatccagcaaccgaggcaattttcaccccagtacaaagctgcgaacgagagtaaacctgacaaaacttggaactcctacgctgtggagatactggaagcatttcaatcttgtaagcatgaaccccaatccatcaaaggaacagctcttccatggggtccagcagcattttcagtctcagcaattggatgagttgcaggtgattctgggcttcatccaggcagcaaagaggctcaagaccctgtaccgctcctag</cdnaseq>

Protein Sequence

<aaseq>MMMETELCSSRVLSPPRYESGDEELSVLPRHTKVIVTGNNRTKS VLVGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEPPTGNEDDDDIDGNNSFC SSSDMGDKDMDYSSIEYHKPTKPRVRHTRPWSSCIKSSNRGNFHPSTKLRTRVNLTKL GTPTLWRYWKHFNLVSMNPNPSKEQLFHGVQQHFQSQQLDELQVILGFIQAAKRLKTL YRS</aaseq>

Gene Sequence

<dnaseqindica>2022..2216#2510..2657#2752..2867#3215..3277#3382..3450#3576..3650#gcagttggaaagcattcagtgctcttctctctctccttctccttcactttctctctcctcttcttcatgctcggatttccctctctcgcgcatcgatccgtcgcctcggcgcacaattcgggctcggaatcgggtccctgatccgcgacaccgcccggctcgatcgtttcccgggctgattcggtggccattgcggcgagatcggagcaggtgagccaagaaaacccccctcggcttgccctcttgaatttttccttttttgatccgcattttacctagttggtttgtcttctggggagttgaatttttgggcggaatgaattgtggttttgatggattgggagtaaatggtggtttgagctcggagggaattcagcgggttttgcgctgctcgcttgcagggtttttgtactagctttgatttgatttgatttggattcctggtgctcgattgggatggattcgatttctgattccgtgattaggtccgtaatcgcaaatcgaagttgcattatctgaatctgcgagtattaaacccgtggttgaatctcccttcttgctctgaattttgaataattcgagctcggattgcgctttaaaaagacagtctttcgcattttgaattcgcgtctcctttctcaaattcaaaattacagtagactttgcagcgcgagtacagatatccttaattgcttatctactaggatcctgtgtctctatagaaaaatacactgttgcagctgtgatcttcagtcaacagaagttcatatcaagaatttgattgcattttgttctatactatgaagaattctggatttgcatgcgatttttcttctaatacaccgggtagcatttcccaattcatcctgcatttaattaagatcttgaagctaggcgatctctaaagtgatttagatcgggtttctgagctgttctgtgaaattttacagtaaattcgaatctatacttgattcagaatttttgcagtgcagattgcactggaaaaaaatatatgaaattattttattaaaatcgggcaccagggtattagttgggggaaaatgcatcacgagattgtactgtactgttcattactgtagtctgcaatctccataactccgctttaaatgcgaatttactgaaagcatgaacacaagattgtttacctgccccaactattaaattcttgtggttactccacataattttttagtagatccagttcccataattaatgccaagcacctagctaagcaaattgcttaagccaaaattgattgcttacaccatttcatttctgatttactacctggcaatcccatgcactgcttttgtacatattccttagacacatcactttcacgattgctactccagcaagtaacgagcaattcttgcagctagctagctggtagtgggtcctggtgagtgtctctgccgattcatcaccatcatggttagtggttgggggtcactaatgctctccagtctgtttgtaatttgcaaccgcatcagtctgatccggatcgagttgcatggaggtgtcacatcatgtaaatcgctttcaggcttcactcgtgccccccatggaaattaatgtacgcaaaaaaaatataaatatgaatttcctgtggaacttaggactcaagaatcgattttgaatttcagattccctttatgcagggtcaagctttttttttttatgttgagctagtttctgaaatcctgctatgcctaataatagctggtatactttttttaattttggagcagcactgtttttagcaaagttcaccaatcctgcagatttgagatgcagagttacttggttcttgcaccgtgcaataaatcttgaacattgcgctaatctaggaaaattttctggcactgggttgatagtgctatttattgtttgctgttgatagtcaatcatagaacactccactgtattgagtttgttgtgtactgattgatttgctgccaaaccttgaatcagggagagatcagggcagagaatcagcatgatgatggagactgagctatgctcctcccgggttctgtctccgcctcggtacgagagtggcgatgaggagctctcggtgcttcctcggcacacgaaggtcatcgtcactgggaacaaccgaacaaagtccgtcttggttggcctacaaggtgttgtcaagaaggctgttggtcttggaggttggcactggctggtgagtctcccgctgaattatttagtatcccacttaaactttactcaattgtggttttctatcttgaaaatgcttgtttaactaatgaacaaaatagtattgacttttattgttttagaaagtagcaaggcaagcagttctcgacatgtttttaaaagatcatctgtgttaataataccgtcataatctatacccaccattatttgaggtgatatcctctcgaaagaaaaaggagaggtgatatgacataatgaaaaacaagacctggacctgagatattgttgcaaatgcaggttctaaagaatggtgtagaggtgaagctgcaaaggaatgctttgagtgtattggaacctccaactggtaacgaagacgatgatgatattgatggcaacaattcgttctgtagcagttccgacatgggagacaaagacatggactattgtaagaccattctgtgataattgcaatttagccaattgctttaaactattagtagtgtgatcaactaacaattttcttctattttcgcaagtagcgagcatagagtaccacaaaccaacaaagccaagagttcggcatacaaggccctggtcttcctgtataaaatccagcaaccgaggcaattttcaccccagtacaaagctgcgaacggtaattactaatcgctatcgcaataagtatacagaatgagtaatacttttgagatatctgaccgtgccatcaagaattaaagccagtgtgacccttggatcacgtggcttggcccatggttaggtaggatctgttgttgtcatagaccattctgctgttttagccaatgcattttgcatgccttattgtggacatggcgaaatcaatttcattgacaattcattcagtttgctacgaaatctgctaggattttaatctgtcttttgcacatcatgtgccattgttcaaaggtttttttttttttgacgggtgttctgatcgaagtatattttacattttgtttgcagagagtaaacctgacaaaacttggaactcctacgctgtggagatactggaagcatttcaatcttgtaagcagcctggatcatcccatttattgattagcaaaccttatcttttcatttccatcattccatggtctaatgtgcgcttaatgatgaaaaactatgcacaggtaagcatgaaccccaatccatcaaaggaacagctcttccatggggtccagcagcattttcagtctcaggtagctacagacctacttatatcttttagataggcagtttgtattgtataacctgtgattacacaatcagtttttaagtcttaacctctggctccaatctcttccaaatgctaaacaaaaagcagcaattggatgagttgcaggtgattctgggcttcatccaggcagcaaagaggctcaagaccctgtaccgctcctagcctgcttcacaaaaccctcagtgtgtagatctcaagaaattagatgttgttcctatgtggttaaaattaatctagtcttgagagagatgaacagaaaagaagataattagaggtgcatttgatgagtaattctttttactttttacctgtaattgagtttatgtaaccccaagttcacacagtgtcagcaactgaccaatctcaattattggatggag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0166600, RefSeq:Os04g0166600