Os04g0167900

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Revision as of 10:58, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0167900| Description = Protein phosphatase 2C family protein| Version = NM_001186836.1 GI:297722802 GeneID:9268838| Length = 5733 bp| Defi...")
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Gene Name

Os04g0167900

Description

Protein phosphatase 2C family protein

Version

NM_001186836.1 GI:297722802 GeneID:9268838

Length

5733 bp

Definition

Oryza sativa Japonica Group Os04g0167900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:4644248..4649980

Sequence Coding Region

4644248..4644606,4645157..4645186,4647295..4647400,4648782..4649147,4649507..4649980

Expression

GEO Profiles:Os04g0167900

Genome Context

<gbrowseImage1> name=NC_008397:4644248..4649980 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:4644248..4649980 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgatggctagcgccggcgtcaacatgccgggtggcgatggggaccacccccccgcggccgcccaggaatgccaccgcctgcgcaggcgccgctacgtccccgccgccgccgccgcgtccgaggacggggacaacagcagcaacggtgggggcgagaagaggagcctcccggcctcctccgcgtcgccgtccccgtccccgacctcgtcggcggcttcctccgactgctcgtccgaccgcgacgacgacgggtgctcctccaccgccggcgccgcggcgcggcggctcccgctcccgtccggggcgtcgacggcggccgcggtgtggcccgtcgcgttcgggtccgtctcgctcgcggggcggatgcgcgacatggaggacgccgtctcgctccggccctccttctgcacctggctcgacggctcgccgatgcacttcttcgccgtcttcgacggccatggcggcccccatgtgtccgcgctgtgccgggagcaaatgcacgtgatcgtggcggaggagatggtggcggaggcggcggcgctgcggcagcggcaaccggcggcgatggaggaggaggaggaggagagggccgtggcgggcggcgctgtcgcggagcttcggccgggtggacgcgctggcggcggtggcgtgcgcgtgcgggcgcgccaccgtgccggcgtgccgtgcccgctgtcggggcagacgggcgccatcatcggctccaccgccgtcgtcgccctcctcgtccgcgaccgcctcgtcgtctccaactgcggcgactcccgcgccgtcctctgccgcgccggcgaccccctccccctctcctccgaccacaagccggaccggccggacgagaaggcgcggatcgaggcggtgggtggccgggtggtgtacctcaacgggccgagggtgcgtggcatcctcgccatgtcgcgagcattagcagaaggaagcagtttacttggcccaaaaggagacaagtacctaaagcctgaagtcatatgtgagccagacatcaccataaccgtgaggaccgtcgacgacgaatgcctcatcctcgcgagcgatgggatgtgggatgtgatctcaaacgagacggccagcgatgtcgctcgacaatgccttgaagacgggagccccaccagtgggcgtcgcgcagctaggagcggcgaagccgcttccagcagcgccggtgctccggcagcagcggtaggccaagaatctgagcctcgctgctaccgtgccgctgctctccttgcgcgcctcgccctcggcagggagagttcagataacattagtgtcgttgtgattgatctgaaaggaagagggtag</cdnaseq>

Protein Sequence

<aaseq>MVMASAGVNMPGGDGDHPPAAAQECHRLRRRRYVPAAAAASEDG DNSSNGGGEKRSLPASSASPSPSPTSSAASSDCSSDRDDDGCSSTAGAAARRLPLPSG ASTAAAVWPVAFGSVSLAGRMRDMEDAVSLRPSFCTWLDGSPMHFFAVFDGHGGPHVS ALCREQMHVIVAEEMVAEAAALRQRQPAAMEEEEEERAVAGGAVAELRPGGRAGGGGV RVRARHRAGVPCPLSGQTGAIIGSTAVVALLVRDRLVVSNCGDSRAVLCRAGDPLPLS SDHKPDRPDEKARIEAVGGRVVYLNGPRVRGILAMSRALAEGSSLLGPKGDKYLKPEV ICEPDITITVRTVDDECLILASDGMWDVISNETASDVARQCLEDGSPTSGRRAARSGE AASSSAGAPAAAVGQESEPRCYRAAALLARLALGRESSDNISVVVIDLKGRG</aaseq>

Gene Sequence

<dnaseqindica>5375..5733#4795..4824#2581..2686#834..1199#1..474#atggtgatggctagcgccggcgtcaacatgccgggtggcgatggggaccacccccccgcggccgcccaggaatgccaccgcctgcgcaggcgccgctacgtccccgccgccgccgccgcgtccgaggacggggacaacagcagcaacggtgggggcgagaagaggagcctcccggcctcctccgcgtcgccgtccccgtccccgacctcgtcggcggcttcctccgactgctcgtccgaccgcgacgacgacgggtgctcctccaccgccggcgccgcggcgcggcggctcccgctcccgtccggggcgtcgacggcggccgcggtgtggcccgtcgcgttcgggtccgtctcgctcgcggggcggatgcgcgacatggaggacgccgtctcgctccggccctccttctgcacctggctcgacggctcgccgatgcacttcttcgccgtcttcgacggccatggcggcccccatgtacgtcgcccccccgctaatcctttgcttaatcccatcattatttcatgctaatcctactcatcataatcttgggttagaaagaaaaaaaaaacagagagagagagagagaaaaagagatagagattggattgattgattgcgaaaatgctgctgttgtgttgtaccgcattgcactgtttgatccacctggcaatgttctagcaccatcgaaaccgaggtcgacacgttttttttttataaaatttgtcgtttaattttcgtttttggtttttactaccactgctcgatcagtgacgtgtgtttgtttggttttctcttttttttggtgtgatcgatggacaaaaaaaaaaaagcaggtgtccgcgctgtgccgggagcaaatgcacgtgatcgtggcggaggagatggtggcggaggcggcggcgctgcggcagcggcaaccggcggcgatggaggaggaggaggaggagagggccgtggcgggcggcgctgtcgcggagcttcggccgggtggacgcgctggcggcggtggcgtgcgcgtgcgggcgcgccaccgtgccggcgtgccgtgcccgctgtcggggcagacgggcgccatcatcggctccaccgccgtcgtcgccctcctcgtccgcgaccgcctcgtcgtctccaactgcggcgactcccgcgccgtcctctgccgcgccggcgaccccctccccctctcctccgaccacaaggtaatcagcccttccattcctacgtggcaccctcctcacacgcacacgtgtccctcacaccacggctttgaccgtacctgccaaaatattccaagtctcgcgctgccgtttaccgttgactcctgcggggggtgggccccagccgaggtgtcgcctctccggaaccttcgcggccgcggctgcctcgccggcgacgcgtggttggccgccggcgaccggagaaaaagagagaggtcgctctcgcttgtcggagagacatggatcgcctcgccttgccgtgctcgccgacgtggaccccgctagcgtcatcacaaaaaagattatcacctcgtattaaaaaataataataaaaaaaataattactagtatctttttttcttctcttattatggtctgtttttgttttggccctctcattaatgcgagtagaaagggcagtggcaatttggagaatttgtgggaacctcgggggtggctgcggaggggcgcggcccacgtggtgttgggcgggggaggggggggggattccgaagtgttttaggtggtgtttagatccagggacttaactttagttcctgtctttagacactaatttagagtattaaatatagactacttacaaaactaattacataaataaaagctaattcacgagacaaattttttaagactaattaatctataattagagaatgtttactgtagcatcacataggctaatcatggattaattaggctcattagattcgtctcgcaaattagtccaagattatggatgagttttattaatagtctacgtttaatatttataattaattttcaaacatccgatgtgatagggacttgaaagttttagtcccatctatacagggccttaatccatcgctttcctggagggggacacgtgttgctctcgcgcggggcacgtggggggataagactggtcagagtgtggggccagctgctttgctgctgtctggtggggcccacgtgagcagtgagagggggttggccgccacctctgccacctgtccctgctcctgtgtactgtgaagttgctgtccctttgcctctttttttttctttttttcttttttatttttgctcttcctgagatggattgtggacccacactggtcagagcttccttttctgtggaaagggggaaaaaagaaggggaaaattggctgggtgtggttggctgtggtaggtccatgaggggggtaggagatgggggcagtggttggtgcgacaatattcgtgctggatgtggtagtgtgattaacctaatcttgctcttgtatcttgctaatcataagtgtgatcttgctgctgacgaacctagattacatggtactataattgacggtgaattatgcagccggaccggccggacgagaaggcgcggatcgaggcggtgggtggccgggtggtgtacctcaacgggccgagggtgcgtggcatcctcgccatgtcgcgagcattaggtaatgtcatcgtcatcatcattgatctaaattctgtctgcaggcactatctttgtgtgttgtgtttgctactctgctgtagaagaactgaaattgcctgtgtcctgggctacaatgtcttggctgctagctgcacacatgattcacttaagaccacatgatacagctagcagtgggtggcacaatctgaatgtttgcgtagctagctagctttggatagaacttggagccacaataaaaccaatttctgtcgctcacgtgttcgtcttggcgtgggttttgatttcacgcggaaacatgtactcaatgagtaaatgtttcgaaaagaagtctgctaagagcaggtacaatagtaggctataagccagctgcaaacatattttaagaagataaataaggagagagaagagtagcagattacagatttgtagccagctatagcacagactccaatacgcagtgtgtgtatgactggtgggaccaggtattaatagtgtattatgtaactattgtataaatgagctattagattggctatagataaattggagctagtagttggctataatattaaacttgctctaatagaagtagtcaggagttgtacttgtgcacataatctggagttagggagaccaattatatatggttggtaatgccttgccattctagtttagttgctctggatatcatttgtttattgttcactagccttttggttttgcttgatcattgggctaaaccactgaagctccattggcaagtcagtttctaagacgtgtccagttgttcttaaactatcatgttgcccccaacgaggttgggggaaatggaaataaacaaaagatcggaaggtaatactatatcacaaagggtggttacatttgtcgctctgcatgttcttccaaacataaaaaggaacctattgctctgcatctttccaccccttgaccaatcaaaaactgcctggtgacagaatctaggtcaaataaggatgttcctgctttaagactatgaggaaaataagtattatatgcaagtttcgtggcaggaaggttatgaatatgacaatagcatggtaccctatgaatttaaggttttttacactttagttacataggatatttgcatctgtccgaaggtaccaacttttttttgtggtttatacaattaactatgacaaagataaaaggtacaattccagcttctaatgagcttctagtagatgttacttggcagtttgttgagttgatacacagtcacatcactgaccccaccggtttgtgccatattatctggcttatcaagaaaatgaccatatgtacccagtccatctcactttagccattaggcctaacatttggcagtgcctgtatggtgttatttcatttagttatattatcagatgtctgaaagaagaaagatggattagacataaaagacacgcgttcatctctgattcaccatctgtgaaagtgctagctctttttattagttgctctgattgtaacctaaccaactgactaaaagaaatgatcttcataaataagtgggacatatatgtttgattaggctagtgacgttgtcctctgttgtatcctaagttcccaatagtgatgttacaccttttttaatctagctttcaggattgacaaaggaaataccttgggtagtaataatttggaccttttgacaatagagaaaagctcaacttgcaccattgtagaaccttgtcagtctatttgatttcaaaactatataattgtacttcatatcgaatgtttataatcaaataacatagaaaatattgtctctgcagatctgatgttgtttctgataaaccactttttcttaaaatagtttttatctgtctatctcacaagctctgttttaaactagagttcagtggtagtatgtttatatatcaggtttcaagttggagagggttgtattatattacagacacaccattttggttgtaggaattgcccatttcacatataggaagcaccacactacttatcacttattaagtattttgaatcaatgaagattcctactttatatagtagattaattaatataatgataatataatttatgtgcagcagaaggaagcagtttacttggcccaaaaggtcaaaggaaatgtgttctttcaaaatacttatctgtccaacttgtcattataggcttatacatgatacatcaccttcccttgatataggcagtacaaatttccctacattctagtagttactgagtggttatagaatattttatgtttctgcatctcacgtttgcccctgttttgatgcttaagcttttcattgcaaaagggctggtccctgtgtatcctttcattgtagcttcagaggtatctgtggcttaaatatttggatggagttcttgaaatgccgtagccataataatgttctcgatttcactagttcgttaggtttatatgtgtcatcttctcctttttctttcatgaaactaaataggattcctgaaaatactatgtaataccatgaatcttctcatttactagaattcaatgcaataccatttgaaatgtttgaaaatttatttcctttcctgtatattacttactttatgagattctttatgtaaactaattcagtatcatgtatgttactctcaattattctaaatatgttcacgcaggagacaagtacctaaagcctgaagtcatatgtgagccagacatcaccataaccgtgaggaccgtcgacgacgaatgcctcatcctcgcgagcgatgggatgtgggatgtgatctcaaacgagacggccagcgatgtcgctcgacaatgccttgaagacgggagccccaccagtgggcgtcgcgcagctaggagcggcgaagccgcttccagcagcgccggtgctccggcagcagcggtaggccaagaatctgagcctcgctgctaccgtgccgctgctctccttgcgcgcctcgccctcggcagggagagttcagataacattagtgtcgttgtgattgatctgaaaggaagagggtag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0167900, RefSeq:Os04g0167900