Os04g0169500

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Revision as of 10:58, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0169500| Description = Protein of unknown function DUF668 family protein| Version = NM_001186839.1 GI:297722808 GeneID:9271772| Length = 18...")
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Gene Name

Os04g0169500

Description

Protein of unknown function DUF668 family protein

Version

NM_001186839.1 GI:297722808 GeneID:9271772

Length

1818 bp

Definition

Oryza sativa Japonica Group Os04g0169500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:4769521..4771338

Sequence Coding Region

4769708..4771252

Expression

GEO Profiles:Os04g0169500

Genome Context

<gbrowseImage1> name=NC_008397:4769521..4771338 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:4769521..4771338 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgggagggtcggcatcctgtcgttcgaggtggcgaacgccatgtcgcgcgccgccaacctgtaccgctcgctgtcggacgccgaaggcggggcggctgctcggcccgctctgcctcggctcccaggcggtgcgcgcgctagtgccgggcgacgacgcgcgcctcctggcgctcgcgctcgccgagaagctcgacgcgctcatccgcgtcgcggccgtcgcggcgcgcctcggcaggcggtgcacgctcccggcgctcctcggcttcgaccacgtctacgccgacctcctcgccggccgctccgacgccgccttcgccgccgccttgcactccgaggccaccgcgctcgtccgcaagctcgaccgcctcgccgccgccacggccgcgctctacgccgagctcgaggcgctcgccgacctcgagcagtctgcgcggaagctccccaccgacgaggcgcgccgcgcgctggagcagcgcacgcggtggcgccgccacgacgcgcgccgcctcagggactcgtcgctctggaactggacctacgacaaggccgtgctcctgctcgcccgcgccgtctgcgccatctacgaccgcatccgcctcgtcttcggcgacccaatgcgggggctcgacttgctggccattggccggagctcaaggcagtgtgaccaaagccggcagctctccggcccagcctcggcgaataattcgggccatgtccggactaatttcggcgacaccaaatcagggccaattgcaaggatcgacatggacacgccacgttccgtgaatttccggtcgaattgcggggcaagcccaggtaaaatgttcatggagtgcttgagcttgagtagctcggtgtcatggaaggatgggtttgaggatgaattcttggaggatgccagctgcattagcacaatcaggtccgggatgcttctgccattcagcggcgagcagggggtgtcgacaatggcaaccaagagtggcaaggttggcagaagggcgcgattcggtccgaaaagtactgtgacatcactagccccgccatccacgattggcgggtcagcgcttgcgttgcattacgctaatattgtcatcatcatcgagaagttgctccggtacccacatcttgttggtgaggaggctcgggatgatctgtaccagatgttgccatcaagcttgagagcagcactgaggaagagcttgaaaacatatgtgaagagcatggcgatctacgatgcgttcctcgcgcacgattggagggaaacgcttgagaagaccctgacatggcttgctccgatggcgcacaacatgatccggtggcaagccgagaggaatttcgagcagcagcagattgtgttgaaggggaatgtgctacttcttcagacattgtatttcgcggacagggagaagacggaggccgtgatatgcgaattgcttgtcgggctaaattacatctgccggtatgagcagcaacagaatgcactgctggattgctctagtagtctcgacttcgacgattgtatggagtggcaactgcagtag</cdnaseq>

Protein Sequence

<aaseq>MTGGSASCRSRWRTPCRAPPTCTARCRTPKAGRLLGPLCLGSQA VRALVPGDDARLLALALAEKLDALIRVAAVAARLGRRCTLPALLGFDHVYADLLAGRS DAAFAAALHSEATALVRKLDRLAAATAALYAELEALADLEQSARKLPTDEARRALEQR TRWRRHDARRLRDSSLWNWTYDKAVLLLARAVCAIYDRIRLVFGDPMRGLDLLAIGRS SRQCDQSRQLSGPASANNSGHVRTNFGDTKSGPIARIDMDTPRSVNFRSNCGASPGKM FMECLSLSSSVSWKDGFEDEFLEDASCISTIRSGMLLPFSGEQGVSTMATKSGKVGRR ARFGPKSTVTSLAPPSTIGGSALALHYANIVIIIEKLLRYPHLVGEEARDDLYQMLPS SLRAALRKSLKTYVKSMAIYDAFLAHDWRETLEKTLTWLAPMAHNMIRWQAERNFEQQ QIVLKGNVLLLQTLYFADREKTEAVICELLVGLNYICRYEQQQNALLDCSSSLDFDDC MEWQLQ</aaseq>

Gene Sequence

<dnaseqindica>87..1631#gtctaggaaggtgaagccggtgacgacgagtagcggcaagggcggcgcggcggcggcggcggcggcggcggtggagggggtggtggatgacgggagggtcggcatcctgtcgttcgaggtggcgaacgccatgtcgcgcgccgccaacctgtaccgctcgctgtcggacgccgaaggcggggcggctgctcggcccgctctgcctcggctcccaggcggtgcgcgcgctagtgccgggcgacgacgcgcgcctcctggcgctcgcgctcgccgagaagctcgacgcgctcatccgcgtcgcggccgtcgcggcgcgcctcggcaggcggtgcacgctcccggcgctcctcggcttcgaccacgtctacgccgacctcctcgccggccgctccgacgccgccttcgccgccgccttgcactccgaggccaccgcgctcgtccgcaagctcgaccgcctcgccgccgccacggccgcgctctacgccgagctcgaggcgctcgccgacctcgagcagtctgcgcggaagctccccaccgacgaggcgcgccgcgcgctggagcagcgcacgcggtggcgccgccacgacgcgcgccgcctcagggactcgtcgctctggaactggacctacgacaaggccgtgctcctgctcgcccgcgccgtctgcgccatctacgaccgcatccgcctcgtcttcggcgacccaatgcgggggctcgacttgctggccattggccggagctcaaggcagtgtgaccaaagccggcagctctccggcccagcctcggcgaataattcgggccatgtccggactaatttcggcgacaccaaatcagggccaattgcaaggatcgacatggacacgccacgttccgtgaatttccggtcgaattgcggggcaagcccaggtaaaatgttcatggagtgcttgagcttgagtagctcggtgtcatggaaggatgggtttgaggatgaattcttggaggatgccagctgcattagcacaatcaggtccgggatgcttctgccattcagcggcgagcagggggtgtcgacaatggcaaccaagagtggcaaggttggcagaagggcgcgattcggtccgaaaagtactgtgacatcactagccccgccatccacgattggcgggtcagcgcttgcgttgcattacgctaatattgtcatcatcatcgagaagttgctccggtacccacatcttgttggtgaggaggctcgggatgatctgtaccagatgttgccatcaagcttgagagcagcactgaggaagagcttgaaaacatatgtgaagagcatggcgatctacgatgcgttcctcgcgcacgattggagggaaacgcttgagaagaccctgacatggcttgctccgatggcgcacaacatgatccggtggcaagccgagaggaatttcgagcagcagcagattgtgttgaaggggaatgtgctacttcttcagacattgtatttcgcggacagggagaagacggaggccgtgatatgcgaattgcttgtcgggctaaattacatctgccggtatgagcagcaacagaatgcactgctggattgctctagtagtctcgacttcgacgattgtatggagtggcaactgcagtagagtccatcagtccaaggtcaggtttctgcttggttccatagtgtacaaggaatatgaaacaacaaagggtacttgtgttttggtttggatttttttctcttctgtttttttgggtgcaagttgcacatgagatcatctatcattcatagatgaaaaaaatttataggattgcctaatgcttttgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0169500, RefSeq:Os04g0169500