Os04g0172400

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Revision as of 10:58, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0172400| Description = Transferase family protein| Version = NM_001058685.1 GI:115457099 GeneID:4335065| Length = 1455 bp| Definition = Or...")
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Gene Name

Os04g0172400

Description

Transferase family protein

Version

NM_001058685.1 GI:115457099 GeneID:4335065

Length

1455 bp

Definition

Oryza sativa Japonica Group Os04g0172400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:4916462..4917916

Sequence Coding Region

4916567..4917844

Expression

GEO Profiles:Os04g0172400

Genome Context

<gbrowseImage1> name=NC_008397:4916462..4917916 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:4916462..4917916 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgttcgtggtaaccaagtcgtcgccgtcggtgctcgtccgcccgtcggagccgacgccggcggcgaccatccggccaacctccactgacatgacacgcctgggcatgtcgttcacgtcgttccacgtgttcgagcgcggcgtcgacgagccggcggagaccatcaggcgcgcgctgtcgcgtgccctggtccactactaccccttcgccggccgcctcgccggcagcggcgacgacgtcgtgttctcgtgcaccggcgagggcgtggtgttcgtccgcgcgacggcgaactgcaccctggaggacgtgaacttcctcggagcaccggtggtcatgtcgctcgccgacctcgccgtccggtacggcgggccatgccgggcggcgtccgacccgctgatgatgatgcaggtgacggagttcgcgtgcggcgggttcgtcgtcgcggcgacgtggaaccacggcgtcgccgacgcgtgcgggttggcgcagtttctacgcgccgtcggcgagctcgcccgcggtctccactcgccgtccgtcgtgccggtcaggtacgacgagtcgctgcctgacatcccgcagcttgccaccatcctcctcaagcggctagccgccggcgtaaaatttgagcacgtcgacttcgcctactgcgacgtcatcatcccgtggagcttcgtcaaccgcgtcaaggccgagttcgggagcaggcacgccggcgaccggccttgctccgtgttcgaggcggtcaccgcggcgatgtggcagtgccggacccgcgccatcaatggccacggcggcggcgccctcgcgccgctcgtgttcgcggcgaacgtgcggaagcacgtcggagccaaggacgggtactacggcaactgcatcatgtcgcaggtggtggtcgccacggccgacgcggtggcgaacggcgacgtcgtcgacttggtgaagctgatcaaggacgccaaggagcggatcccggtgctcctcagcaccaagacgcttgggctcgacgacagcggcggcggcgagctcgtcgccgcgctgtgcgggtacggcgcgctgtacgcgtcgagctgggcggggctcgggctcgacggcgtcgacttcggcggcgggaggccggcgcgggtgatcccctactcggaggtgaagatgctgccgtccatctccccgggcgcgccgtgctcgatgatggacggccatggcgtcaacgtggtggcgtcgtgcgtaacagacgaacacctcgaggggttccgggcacaattggcgaggctctag</cdnaseq>

Protein Sequence

<aaseq>MTFVVTKSSPSVLVRPSEPTPAATIRPTSTDMTRLGMSFTSFHV FERGVDEPAETIRRALSRALVHYYPFAGRLAGSGDDVVFSCTGEGVVFVRATANCTLE DVNFLGAPVVMSLADLAVRYGGPCRAASDPLMMMQVTEFACGGFVVAATWNHGVADAC GLAQFLRAVGELARGLHSPSVVPVRYDESLPDIPQLATILLKRLAAGVKFEHVDFAYC DVIIPWSFVNRVKAEFGSRHAGDRPCSVFEAVTAAMWQCRTRAINGHGGGALAPLVFA ANVRKHVGAKDGYYGNCIMSQVVVATADAVANGDVVDLVKLIKDAKERIPVLLSTKTL GLDDSGGGELVAALCGYGALYASSWAGLGLDGVDFGGGRPARVIPYSEVKMLPSISPG APCSMMDGHGVNVVASCVTDEHLEGFRAQLARL</aaseq>

Gene Sequence

<dnaseqindica>73..1350#agagacctatcaagtatgaagtatcaagcaataggtaagtcgcatattcccacagagttttagctcaagacgatgacgttcgtggtaaccaagtcgtcgccgtcggtgctcgtccgcccgtcggagccgacgccggcggcgaccatccggccaacctccactgacatgacacgcctgggcatgtcgttcacgtcgttccacgtgttcgagcgcggcgtcgacgagccggcggagaccatcaggcgcgcgctgtcgcgtgccctggtccactactaccccttcgccggccgcctcgccggcagcggcgacgacgtcgtgttctcgtgcaccggcgagggcgtggtgttcgtccgcgcgacggcgaactgcaccctggaggacgtgaacttcctcggagcaccggtggtcatgtcgctcgccgacctcgccgtccggtacggcgggccatgccgggcggcgtccgacccgctgatgatgatgcaggtgacggagttcgcgtgcggcgggttcgtcgtcgcggcgacgtggaaccacggcgtcgccgacgcgtgcgggttggcgcagtttctacgcgccgtcggcgagctcgcccgcggtctccactcgccgtccgtcgtgccggtcaggtacgacgagtcgctgcctgacatcccgcagcttgccaccatcctcctcaagcggctagccgccggcgtaaaatttgagcacgtcgacttcgcctactgcgacgtcatcatcccgtggagcttcgtcaaccgcgtcaaggccgagttcgggagcaggcacgccggcgaccggccttgctccgtgttcgaggcggtcaccgcggcgatgtggcagtgccggacccgcgccatcaatggccacggcggcggcgccctcgcgccgctcgtgttcgcggcgaacgtgcggaagcacgtcggagccaaggacgggtactacggcaactgcatcatgtcgcaggtggtggtcgccacggccgacgcggtggcgaacggcgacgtcgtcgacttggtgaagctgatcaaggacgccaaggagcggatcccggtgctcctcagcaccaagacgcttgggctcgacgacagcggcggcggcgagctcgtcgccgcgctgtgcgggtacggcgcgctgtacgcgtcgagctgggcggggctcgggctcgacggcgtcgacttcggcggcgggaggccggcgcgggtgatcccctactcggaggtgaagatgctgccgtccatctccccgggcgcgccgtgctcgatgatggacggccatggcgtcaacgtggtggcgtcgtgcgtaacagacgaacacctcgaggggttccgggcacaattggcgaggctctagtgatctgccctatttcaaagagtatcctaaagcgatttcaaattttcaaatctttacttttatgaattaagttttgcagatactttttatgtctttgctccagtg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0172400, RefSeq:Os04g0172400