Os04g0175000

From RiceWiki
Revision as of 10:58, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0175000| Description = Conserved hypothetical protein| Version = NM_001058692.1 GI:115457113 GeneID:4335073| Length = 2265 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os04g0175000

Description

Conserved hypothetical protein

Version

NM_001058692.1 GI:115457113 GeneID:4335073

Length

2265 bp

Definition

Oryza sativa Japonica Group Os04g0175000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5116842..5119106

Sequence Coding Region

5118300..5118743

Expression

GEO Profiles:Os04g0175000

Genome Context

<gbrowseImage1> name=NC_008397:5116842..5119106 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:5116842..5119106 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaaggtaggtggcggcggcggggctcccggcgcagcgagtcaagcggcagctaggcttccggcgcggcaaggtaagcagtggcccgggccttctggcgccttgccagccttcctcgttcctccctcgccgtcgagccgccccgtcgccctcgtcatgccgccgatggccgacgccgaagaaggactcatgcgtcgtcaagccgccccgtcgacgacagcaacggcaacctcggggacgacggcagtggatggcgatgactggcgacagcggctggcgacctcgacgatgatggtggcgcttcggcgtgggttcaagatgcacggcgcctgcgtcggtggcagcgtcgaggtcgtggctgcctgcgccattgtagagaagagccgaaggagatggggggggggggggggaatctgtgtgggtctcatggttggccagtga</cdnaseq>

Protein Sequence

<aaseq>MVKVGGGGGAPGAASQAAARLPARQGKQWPGPSGALPAFLVPPS PSSRPVALVMPPMADAEEGLMRRQAAPSTTATATSGTTAVDGDDWRQRLATSTMMVAL RRGFKMHGACVGGSVEVVAACAIVEKSRRRWGGGGGICVGLMVGQ</aaseq>

Gene Sequence

<dnaseqindica>364..807#gttaccgccgccccatccctattcgcccatcgccaatgctcgggctccgtctgccggtgcccttctagccgagctctcaccggccgcctcgtctccctcaacctcgccgtcgagcaacgccgccaccgccactccctcccatctccaacccacccggcggatgaggcggcggcaggtctccggcgtgcgcggtaacgacgctctagcgcgagtcgacggccggcggggcggcggccgcgggccttcctgctcccttgtgcggcgagacaggtagcggccgtgggtttccggcacgacgaagacaggcggcggtcgcgggggtcctgacgcggcgaaggcaggcggcggccgcagggttccgacatggtgaaggtaggtggcggcggcggggctcccggcgcagcgagtcaagcggcagctaggcttccggcgcggcaaggtaagcagtggcccgggccttctggcgccttgccagccttcctcgttcctccctcgccgtcgagccgccccgtcgccctcgtcatgccgccgatggccgacgccgaagaaggactcatgcgtcgtcaagccgccccgtcgacgacagcaacggcaacctcggggacgacggcagtggatggcgatgactggcgacagcggctggcgacctcgacgatgatggtggcgcttcggcgtgggttcaagatgcacggcgcctgcgtcggtggcagcgtcgaggtcgtggctgcctgcgccattgtagagaagagccgaaggagatggggggggggggggggaatctgtgtgggtctcatggttggccagtgatttttgggctggccaaatttggctagtggaggggggttttgggcagccgcggatggctgcttagccatccggttggagaggctgttggagcttttttttttttttttttttactagaatggctaaaatttggcttggagagtgggatggagagactgttggagatgctcttacagcagtcaaataacattgaaggtacaacgtactctctgaatatttcagttgctttcattgtataaacaataattaactaaatctcttcgtacgcaatgggagaacattatcacactgatgttcctgctgcaaaacaaagagacataacattttagtcttctagtaaaccagaaggaccagaaacggaaaaaaaaagaattcagtttattagtttagaaattcgaactctgatagaatgatattttctaattcatgaaatccaaaaaaatgtacttgacatacaagtcaagattcttgatttttgaaggggtgatacctgttctggaacgaagggggaaaaagggattcattatggcaacagcccacataacttatttctagattctgttatttttcattcctcttcattaggtatatatgatgatatggctgtttttttgtcttacaacacaaggtgagatgcactgcaaaatgccggtgtatagaatgcagaaacggccctggaataaagagtgagtactgtaagctgttatttttgtttcctcgtctcatcacatcataagtgtgtagtgtgtactcaattgattttggagtaacttgggaaggaccccattttgttcttcacccatgtcatttgttttatcttgcctatatttatctgacctgacaaaacaggtgattcaaacactgaaacagatcattgtgatgctagtggcctaacctatgaagaatctatcgtggaaaacaccacacaatatgaggggacttcgaatcgaaacaaacgcccaagaaattttgtaagttctctactcttttacacttcacttacatagtttgccagtagaaactgtaaatgtaatcaataactgcattgcgttaaaaaaattataacatgttcaaacaaaacactgatggtctgctcttctgtgcagtgataacaaccttcagatcgtgttaccttaccatcctcaacctcaagacaatagccactttctgccaaaaatgcaactgtaaacacaatcatcccttgcaaaatctcaaagcacggtaaggccttcatactccatgacccttcaaacctttgcgaaatctcaaagcatggtaagaccttcatactccatggcccttcaaaccttgtcacccactcgatagtctcagtgggttcagttgacgttgcacctgatcaaaaactatggggacagttgtcaccttcggttagtatcaaccatacttttgccgaagaggtatataaacatttcactcatatatgaaatgcttttttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0175000, RefSeq:Os04g0175000