Os04g0175600

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Revision as of 10:58, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0175600| Description = Similar to 0-methyltransferase (EC 2.1.1.6) (Fragment)| Version = NM_001058696.1 GI:115457121 GeneID:4335077| Length...")
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Gene Name

Os04g0175600

Description

Similar to 0-methyltransferase (EC 2.1.1.6) (Fragment)

Version

NM_001058696.1 GI:115457121 GeneID:4335077

Length

5514 bp

Definition

Oryza sativa Japonica Group Os04g0175600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5154339..5159852

Sequence Coding Region

5154351..5154805,5155089..5155402,5159116..5159183,5159340..5159639

Expression

GEO Profiles:Os04g0175600

Genome Context

<gbrowseImage1> name=NC_008397:5154339..5159852 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:5154339..5159852 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccgtacactagcagggctccggcgagtggtggtgtcgccgccggcgacgacgacgaggaggcggcgtgcctgcaggcgtttgagctaatgtgcatcttcaccgtccccatgacactgaaggcggcgatcgagctcggcctcctcgacgcactagccgccgccggcgacggccgcgcactgaccgcggacgagctggccgccgcgcggctcccggacgcggcgccggacaaggccgaggcggcgtcctcggtggaccggatgctgcggctcctcgcgtcgttcgacgtcgtcaagtgctcgacggaggccgggcccggcggcgaacctccccggagacgatactcgccggcgcccgtctgcaggttgttcaccgccggcggcaacagccaccgtggatctctggccccctcggtcttgttcggcgtcgacgaggactacctgtgcacctggcgtcagttggcggcggcggtgggcggcggcgggccgtcggcgttcgagagggcgcacgggatgcggatgttcgagtacatggggacgaaccgccggctgaacacgctgttcaaccaggccatggcgcagcagtccatgattgtgattgacaagctgctcgaccgcttccatgggttcgacggcgtcggcgtcctcgtcgacgtcggcgggggcaccggcgccaccctggagatgatcacctcccggtacaagcatatcaccggcgttaacttcgacctaccccatgtcatctctcaggctccatctattccgggtgtgaaacatatagctggaaatatgtttgagagcatatctaatattggagatgcaattttcttaaagatgatcctccacatgcaaaacgatgaggactgcatcaagatcctcaagaattgccaccaagccctgccggacaatggcaaggtgattgctgttgagattgtcctcccgacgatcccagatctggcccaaacagcacgatacccgttccagatggacatgatcatgctcagcaattcccggggaggaaaggagaggacagagctggagttcgccaagctagccacggactctggtttcagtggtgccttgcgaacaacctacatcttggccaactattgggttcttgagttcagcaagtag</cdnaseq>

Protein Sequence

<aaseq>MDPYTSRAPASGGVAAGDDDEEAACLQAFELMCIFTVPMTLKAA IELGLLDALAAAGDGRALTADELAAARLPDAAPDKAEAASSVDRMLRLLASFDVVKCS TEAGPGGEPPRRRYSPAPVCRLFTAGGNSHRGSLAPSVLFGVDEDYLCTWRQLAAAVG GGGPSAFERAHGMRMFEYMGTNRRLNTLFNQAMAQQSMIVIDKLLDRFHGFDGVGVLV DVGGGTGATLEMITSRYKHITGVNFDLPHVISQAPSIPGVKHIAGNMFESISNIGDAI FLKMILHMQNDEDCIKILKNCHQALPDNGKVIAVEIVLPTIPDLAQTARYPFQMDMIM LSNSRGGKERTELEFAKLATDSGFSGALRTTYILANYWVLEFSK</aaseq>

Gene Sequence

<dnaseqindica>13..467#751..1064#4778..4845#5002..5301#agagaggctcacatggatccgtacactagcagggctccggcgagtggtggtgtcgccgccggcgacgacgacgaggaggcggcgtgcctgcaggcgtttgagctaatgtgcatcttcaccgtccccatgacactgaaggcggcgatcgagctcggcctcctcgacgcactagccgccgccggcgacggccgcgcactgaccgcggacgagctggccgccgcgcggctcccggacgcggcgccggacaaggccgaggcggcgtcctcggtggaccggatgctgcggctcctcgcgtcgttcgacgtcgtcaagtgctcgacggaggccgggcccggcggcgaacctccccggagacgatactcgccggcgcccgtctgcaggttgttcaccgccggcggcaacagccaccgtggatctctggccccctcggtcttgttcggcgtcgacgaggactacctgtgcacctggtaagatcgacctcaaaagttccatcgccaactaccagtttcaaattcaagctaagtccaggatttgaaatttcgtcccccaccggagattttcgcccgagattttcgtttttttaatttttttgtgaatttggtcaaattgtattcaaattcattgacaatcagtcaaaatttcaaataatttcggcaaaaaaatttcgaaatttctgaaattcggtcccccggcaaaaaaaccaatttcaaaattgaaagccttggctaagtcaagccgtttcctgtgaaggcgtcagttggcggcggcggtgggcggcggcgggccgtcggcgttcgagagggcgcacgggatgcggatgttcgagtacatggggacgaaccgccggctgaacacgctgttcaaccaggccatggcgcagcagtccatgattgtgattgacaagctgctcgaccgcttccatgggttcgacggcgtcggcgtcctcgtcgacgtcggcgggggcaccggcgccaccctggagatgatcacctcccggtacaagcatatcaccggcgttaacttcgacctaccccatgtcatctctcaggctccatctattccgggtaactaaatatacttcttccgtataatattataagttgttttaatcttttttataactaaatttattaaaaaaaatagcaatatttacaacataaaatcagattcattaaattgtattataatattgttaaatttttctgtgatttagtaaacttaaaaatatttgactataaaaacagtcaaagcaacttaaaaatatgaaacggagggagggagtaatattctatccattgctatgatagttgtgtttgagtagttgacttatcaatattagtattaaagactgacgtaacgtgccgacctttaatttaacactagtatatgctgagacgcgaaaaacgttaatcaccatacgttcaaattaaaccacttttcacgtgtgctcaggggggcagtttggaccaaaccataatgttgaactgttgaagggaaccaataaagtggggattttggaatttttccaccagtaaagtatatgcgattctaattttgagatttacaacggtgggctcaccatatatagtctaaccctttacacaccatttgccttatctcccataataaaagtcactagaacggataccatcatttcaatcggatggtaagccacatctcaatcggatacggcgtccgtcacaggctagaagtcacagatgtgaagagttatctcaatcgggaaaacagccgtcacggatgaatctatctcaatcgggtcctaattaaaacctgtcaccgatagctttaacccagacgactagtcaaactatagtccgtcatggatgacctatctcagtcgggccacaactagtgtccgtcacagatgacccttatctgtgacgggcattaactttagcccgtcacagataaccctcatctcaatcgggcctaagtttatgctcatcacatatgagtataatccaaatttttttttttattttttggctagccttagacctttgaggtccatgccatgccgtcccgcctctcccaggccagtcttttttgtcctcactcgtgtgcacccgggaagaacttcccggtcggtcggtcacagatgaccctcatctcaatcgggcctaagttaatgtccgtcacagatgagtataatccaaacagatgagtataatccaaaaaaaataagtataatccaaaacaaaatagctagcctcagacctttgaggtccatgccatgccttttgtcctcactcgtgtgcatccgggaagaacttcccggtcggtcggtcacagatgaccctcatctcaatcgggcctaagttaatatccgtcacagatgagtataatccagacagatgagtataatcccaaaaaaaaaggtccatgccatgccttttgtcctcactcgtgtgcatccgggaagaacttcccggtcggtcggtcacagatgaccctcctctcaatcgggcctaagttaatatccgtcacagatgagtataatccaaacagatgagtataatcccaaaaaaaaaagtataatccaaaacaaaatagctagcctcagacctttgaggtccatgccatgccgtcccgcctctcccaggcctgtcttttttgtcctcactcgcgtgcacccgggaaggtcggtcacctatcccaaaattgctccaggccaagcacgcttaacatcaaagttctttggagatcagcttccggaatagtagttgtaacttgttggtatgagtattctattaatcctattaagccctatgccaggatgtcacaccccaacatcctccattcatatacattcattcattcacatacattaacatcaatatatttaacatagccacattcacataacatctattttgatcacatatttcatatccattcacatatttcactagcaaaaccgagttaattggatcaaatatatataattctaagaaaaatgaattttgaattgaattttataatactaaataaactcatatgaaaaagctgtcaaaaacaaagttgtagaactcattgagatctgtcaaaaataaagcccgtcatagatgagaactttaaatttaattttaggccggtgtgtcaaatgcaaaaatcataaacaaaaaaattgtataattcatcgagatctacaactattctatcggttctttgtacaaataagttcatttgaacgattcaaattttgaattttcaaaatttgacaactttgaacaaaatttggggttattaaatgatttcaaatggaaaaatcaccaaaaccaaaattgtagaactcatcgaggtgcaaaacttttattttggtcatttttctatataacattttttgaactgtttgaatttgaatttaaaaatatgacaacttcaaagaacatttttaaatactaaataatatcaactgaaaaagttgtcaacaacaaagttgaataactcatcaagatcaaaaacttttattttggttatttcttcctacgacaaagtgatagtaacattgttcacaaaattgacatatctcttatatggttttataaactataacacatatatgtaaaatttgtgaacaatgttactaacattttgttggataaagaaataacaaaaataaaagttttagatcttgatgagttattcaactttgttgttgatgactttttcaattgaaatcatttagtatttgaaaatgttgtctgaaggtgtcatattttccaattcaaattcaaactgtttaaaaaaatgttatatagaaaaatgaccaaactaaaagttgtaaatcttgataagttatataactttgttgttgacattttttccatttgaaatcatttactacccgtaaaattattttgactcataaaataaattattatactgcacttaattattttgctatagttaaacttacaatataaacatttcatatgaaaaatggaaaaatactcatcggtgacgggctttaattaatgcccgatagagattaagttatctcaatcgggcattagtatatagcccttcactgatgatggtcatctgtgacgggccctaacttgagacccatttgagatatggaatgctatcctaatcgggtctaaactacggcccgtcactgataggtgccatccgtgacgggcttaagttttatgtccatctaacatgtctgtgcattcatatctcaatcgggcacttttcggcccgattgagatgacttccttgtgatggcccgctatttgtaggcatgttagaggccgtcacagatagaaggatctgtactagtgagtatagcaacattataattaattaagctcgtcgtagatgtattgtagcgatgttagacgatagtggcatggccgattttacatgtaaatggtgaccgacttatacactccaaatatcaagaattagtttgattagctggtatatgttagaaatatatcaaagaaaataatttgcatagtttttttaccctaaatcacggggttgtctgaaaaaaaaaagcaaaaacctagggagtctttcattacatatgcctcgaaacctagaaattttgtaacatttcctcgatattttcggcaacccactgtagttctatctagtttaaaacactagttacttgggggatgattacgaattgaagagttgaacattgtgtggttcaatttagtaccaaaagatatgaaaatgactcgaaagatggctaagaaatactacccatatagtttttctatgttggttttacatgcaggtgtgaaacatatagctggaaatatgtttgagagcatatctaatattggagatgcaattttcttaaaggtatggtgaacaacatacaacagctccttctctatgaattcaatatctatattaaaaactaagatagcatggtggtcataatttttggttgaatcaaatgactttatcatatatattacagaataaaaacaaatgtttgtcaaaatatatgtacagatgatcctccacatgcaaaacgatgaggactgcatcaagatcctcaagaattgccaccaagccctgccggacaatggcaaggtgattgctgttgagattgtcctcccgacgatcccagatctggcccaaacagcacgatacccgttccagatggacatgatcatgctcagcaattcccggggaggaaaggagaggacagagctggagttcgccaagctagccacggactctggtttcagtggtgccttgcgaacaacctacatcttggccaactattgggttcttgagttcagcaagtagctctgaaaaatcatgtcaagttcaatttgctaagcattttaatgtgtgcatgggtatttcaataccatacaaatggtgatcagaatcgctatatatactgaacaatatatgtcaaatatacaatataaaatgtaaagtgtcccttaaaattgaacaatattgtacatatgtttcagcattgctaataaaagcatccaactcaggttatggcta</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0175600, RefSeq:Os04g0175600