Os09g0565400

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Revision as of 07:35, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0565400| Description = Lipoprotein, type 6 family protein| Version = NM_001070482.1 GI:115480706 GeneID:4347872| Length = 3693 bp| Definit...")
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Gene Name

Os09g0565400

Description

Lipoprotein, type 6 family protein

Version

NM_001070482.1 GI:115480706 GeneID:4347872

Length

3693 bp

Definition

Oryza sativa Japonica Group Os09g0565400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:23345149..23348841

Sequence Coding Region

23345383..23345730,23346596..23346712,23346829..23346940,23347386..23347462,23347553..23348686

Expression

GEO Profiles:Os09g0565400

Genome Context

<gbrowseImage1> name=NC_008402:23345149..23348841 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:23345149..23348841 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacgacggcgacgccgtcctctccgacgtcgacgaggaggaccctctcccgcccccgccccctccctccacctcctcctcccaaaaatccccatctccttcacaaccccaaccccaaccccatgcgcaggcgcagcgcctgcacgacctggccgccgagctggaggaggagcgccgcctccgccgcaaggccgaggaatccctcgccgaggccgagaagcgctccgaacgcgtcaaggccttagcgcagaacgtcctccgcaagcacgacgacctcaagaccgaggcctccaccgcctcctccatgctcacttccggcttcgagaggatctccgccaaggcctccccctccgccgccgcctcgcccgcgccgctccccacttcccaaaagtactcctccggcctccccgccatcgcctacggcgtcctcaagcgcgccaacgacatcgtcgatgacctcctctcccagatcgacgccgccaaccgcgaccgcgacagggcgcgcgagcagatggagcaccgcaactaccagatcgccatcgaggtctccgagctcgaggcgtccctcgcgtccaggtccgcccactgcgactccctctccaagtccctctccgacaaggacgccgagatctcggacctccggaacaacctcgccttcctggagaccaagctggacgcgcagaggcccgtgctcgccgaccagatcgcctgcgcctccaaggtgtacgacgagatacgtgaggtggtcaagctagtggacgcggatgccgcgagcgcgctctctgactcggtgttcgtctggaaggagaccgacgtggaggagagcctcaaggtgtccctggaagggaccaagatggcgtacgatctcgctaccactgccctgcacaaggttggggcatgggttgataaaaaggaaagcaaagtgagggatttggaagcgagggtggatgagctattgcgggagaaagagcacattggggtgttgctccgcagcgcgctgcaatcaaacaccagcgaggtgctcaaggttgctgaggatggactaagggaggccggaattgaggttgggctcaaagagcgcagggagcacaggccagggagcatggagaaagatgaagtctataccctagcaggggaattggagaatagcatgaaggagtcccaagttaagattgttgagctgcaacatcttgttgaagcactaagggcggagtctggtctacttcggacaagactggaagggcaagaaaaagagattgcccagctacggaagcaaataaagcatcttgaagagaaggaaagggtggcaaatgaaagtgttgagggtctgatgatggatgtaacagctgctgaagaggagatcaaaagatggaagatggcagcagaggaagaagctgaagctggtaaagcaattgagcaagagtttgaaactcagctatcttccctaaacaaggaattagacgaagctaaacaggcaatgctggagctagagaacaaactgaagttcaaggaagagacagcggctgcagcaatggcggcacgtgatgccgcagagaaatcattgaaactagcggatatgagatcaaccaggctgcgagagagactggaagagatcaataggcagctcgaagaatcagacaacagaagggactcgagcaatcgcaacgggcataggtatatgtgctggccatggcaatggttggggctgaactatgtgcgattgccaccgacagaggcagatcaaacctccaacgagatggagctatctgaacctctgatatag</cdnaseq>

Protein Sequence

<aaseq>MADDGDAVLSDVDEEDPLPPPPPPSTSSSQKSPSPSQPQPQPHA QAQRLHDLAAELEEERRLRRKAEESLAEAEKRSERVKALAQNVLRKHDDLKTEASTAS SMLTSGFERISAKASPSAAASPAPLPTSQKYSSGLPAIAYGVLKRANDIVDDLLSQID AANRDRDRAREQMEHRNYQIAIEVSELEASLASRSAHCDSLSKSLSDKDAEISDLRNN LAFLETKLDAQRPVLADQIACASKVYDEIREVVKLVDADAASALSDSVFVWKETDVEE SLKVSLEGTKMAYDLATTALHKVGAWVDKKESKVRDLEARVDELLREKEHIGVLLRSA LQSNTSEVLKVAEDGLREAGIEVGLKERREHRPGSMEKDEVYTLAGELENSMKESQVK IVELQHLVEALRAESGLLRTRLEGQEKEIAQLRKQIKHLEEKERVANESVEGLMMDVT AAEEEIKRWKMAAEEEAEAGKAIEQEFETQLSSLNKELDEAKQAMLELENKLKFKEET AAAAMAARDAAEKSLKLADMRSTRLRERLEEINRQLEESDNRRDSSNRNGHRYMCWPW QWLGLNYVRLPPTEADQTSNEMELSEPLI</aaseq>

Gene Sequence

<dnaseqindica>3112..3459#2130..2246#1902..2013#1380..1456#156..1289#aagtgatgaagtaacccactcctcgaaggcttgtgttccgccgcgtcgccgtcgcaaccgaatcgcatcgcatcgcatcggtccaaactcccaaccggcgacggcgaggccgacgaaacccaaacccagctaagcttccctcttcgattccccccatggccgacgacggcgacgccgtcctctccgacgtcgacgaggaggaccctctcccgcccccgccccctccctccacctcctcctcccaaaaatccccatctccttcacaaccccaaccccaaccccatgcgcaggcgcagcgcctgcacgacctggccgccgagctggaggaggagcgccgcctccgccgcaaggccgaggaatccctcgccgaggccgagaagcgctccgaacgcgtcaaggccttagcgcagaacgtcctccgcaagcacgacgacctcaagaccgaggcctccaccgcctcctccatgctcacttccggcttcgagaggatctccgccaaggcctccccctccgccgccgcctcgcccgcgccgctccccacttcccaaaagtactcctccggcctccccgccatcgcctacggcgtcctcaagcgcgccaacgacatcgtcgatgacctcctctcccagatcgacgccgccaaccgcgaccgcgacagggcgcgcgagcagatggagcaccgcaactaccagatcgccatcgaggtctccgagctcgaggcgtccctcgcgtccaggtccgcccactgcgactccctctccaagtccctctccgacaaggacgccgagatctcggacctccggaacaacctcgccttcctggagaccaagctggacgcgcagaggcccgtgctcgccgaccagatcgcctgcgcctccaaggtgtacgacgagatacgtgaggtggtcaagctagtggacgcggatgccgcgagcgcgctctctgactcggtgttcgtctggaaggagaccgacgtggaggagagcctcaaggtgtccctggaagggaccaagatggcgtacgatctcgctaccactgccctgcacaaggttggggcatgggttgataaaaaggaaagcaaagtgagggatttggaagcgagggtggatgagctattgcgggagaaagagcacattggggtgttgctccgcagcgcgctgcaatcaaacaccagcgaggtgctcaaggttgctgaggatggactaagggaggccggaattgaggttgggctcaaagagcgcagggagcacaggccagggagcatggagaaagatgaagtctataccctagtaagatctttgtaatgctataatgttgcaggttcatggaccacttaatacggtacaactaaattatctatcatgcactcaatgctgcaggcaggggaattggagaatagcatgaaggagtcccaagttaagattgttgagctgcaacatcttgttgaagcactaaggtagctatctccactgacgaatttttgttctgtttactcccagtgtaccataagtttagtttgaagggtagcaggaaactcactagaactgtgtgtttcctttattgtgttgtcactttcgctgcctgttgaactacatggcaacaaagaattttaaaagaccaagacacacttgctgtcaattagacatgtggtctgaagcatttgtcttttgaagttctgtgtaagaaacaataatatctacgatttacaatgaaacattgggaaatgcaacactcttgacatctcgatatggacaactgagctgcaatgtgctaaatgctatcacttatcacctagtgcatttttcttcttcaaaatatcctgattttgttccagcccgtgcactgattctatataattattttttaaacttatcctaattgtgtgctttgcttgtttcaagggcggagtctggtctacttcggacaagactggaagggcaagaaaaagagattgcccagctacggaagcaaataaagcatcttgaagagaaggaaagggtggcaaatgaaagtgtaattttctactactgatttttttaggtttaatagttatcacacctttcttttccgagttattttacactgatgcttgtatgccaacgactaaacgtgttatgtacactcttaaggttgagggtctgatgatggatgtaacagctgctgaagaggagatcaaaagatggaagatggcagcagaggaagaagctgaagctggtaaagcaattgagcaagagtttgaaactcaggtactttgttacaaacatgcttcatacgatcataatcttgcatgttttcataagttgcactatgaaagagataactcagtgcatattaatcgtagcatggtaaacttgttttgtctgccaacatgagactgtcatatgctgtgttgcagcttcttttaggtgtgctgacagcatgtagttacagtatatagaaaaggagataatctgcaagtcgtattgcagctgtttaaatgatgtgtctaaaggaagagattggagtctaaatgatgtgtctgttgtacatttagtgaaaacatcattaataccctgacatgagtttggaattaagcaggggctgtgtccttttccaagacgtaacaatgtttgtgaaacctgatcaatactctgattaataatccatgatagaattattatggctgcgctgctccattcagttgtcaatttgtcatcaatgaaaagcttctacacttgttttttgttaggccatggaaattaatgacacctggatttcattatcccaatttttggttaaggtgtggtcttattgcttgattatactaaaaaccaaatgggttttagtttgttcaggttggttatttccattgttgagtctaagaaaacaaattaaagatgcctaaggatgaaatttgctaggtatctgtggtggcgttggcattagatgtagctgttccccattagctatgcagtggctgtatgaactgtgaagggtacagaatcttaaggagcccttgatagagtcattgaatcctttttgctcttcatactacaggcttttgagatctgtcttgtagaagaaccgatagctgataagttgtccttgttctaactatgctttgttgcacagctatcttccctaaacaaggaattagacgaagctaaacaggcaatgctggagctagagaacaaactgaagttcaaggaagagacagcggctgcagcaatggcggcacgtgatgccgcagagaaatcattgaaactagcggatatgagatcaaccaggctgcgagagagactggaagagatcaataggcagctcgaagaatcagacaacagaagggactcgagcaatcgcaacgggcataggtatatgtgctggccatggcaatggttggggctgaactatgtgcgattgccaccgacagaggcagatcaaacctccaacgagatggagctatctgaacctctgatatagttgtgccatatctatacagattgaagaaatacacgacattttgaaaggaaaaaaaaaacgtgagaaggagatttcattttttttaatttgtgtagatgttcgggaaaattgttaatgcttgtgcaaaaactcacgagggtgttagatgcggcggtgcaattgtaaaatcatgcagttgggattatagttaagctgtcaataagttcatctttaaacaaaagtggagtaatttct</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0565400, RefSeq:Os09g0565400