Os04g0180400

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Revision as of 10:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0180400| Description = Similar to Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment)| Version = NM_001058712.1 GI:115457153 GeneID:4335096| L...")
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Gene Name

Os04g0180400

Description

Similar to Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment)

Version

NM_001058712.1 GI:115457153 GeneID:4335096

Length

1839 bp

Definition

Oryza sativa Japonica Group Os04g0180400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5477244..5479082

Sequence Coding Region

5477307..5478200,5478291..5478920

Expression

GEO Profiles:Os04g0180400

Genome Context

<gbrowseImage1> name=NC_008397:5477244..5479082 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:5477244..5479082 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagataaactcggcagccaccctcaccctcgtctctctcctcaccctccccattcttctggcgttgctgacccgcaagtcgtcgtcaaagaagaggaggcctccagggccatggaacctccccttggtcggcggcctcctccacctcctccggtcgcatccgcaggtcgcgctccgcgagctcgccagcaagtacggcccggtgatgttcctccggatggggcagatcgacacggtcgtcgtctcatcgccggcggcggcgcaggaggtgctccgcgacaaggacgtcatgttcgcgtcgcggccgagcctcctcgtctcggagatcttctgctacgacaacctcgacgtcggcttcgcgccctacggcgcctactggcggatgctgcgcaagctctgcacggtggagctcctcagcaccaaggtggtgcggcagctcgcgccggtcaggaatgacgagacgctgaccctcgtcaggaacatcaaggccgcctcctccggccatggcggcggcggcggcaagaagccggtcaccctcgccaggctgctcacgacgtgcacgaacacgatcaccgccaaggcggcgttcgggcaggcgtgcggcgtcgagctccaggagcagttcttgacggctctggacgtcgggctcaagttcagcggcggattctgcttcggcgacctcttcccgtcgctgcggttcatcgacgccatgaccgggctgaggagccgcctgtggcgagcacgcgggcagctggactccgtcttcgacaagatcatcgctcagtgcgaggagcatcagggtgattcccttgtcaacgtccttctcaggatcagagatcagggcgacctcgaattccccttcggcacaacgaacatcaaggcaattatactggatatgttcacgggagggacagagacgacgtcgtcggccgcggagtgggtcatgtcggagctcatgaggaaccctgaggtaatggccaaggtacaggccgaggtgcggcgagtgttcgacaacaagagcccacaagaccatgagggcctgattgacaacctacgctacatgaagatggtgatcaaggagactatgaggttgaatccagtgttgccgctgctgatgccccatctctgccgggagacctgcgacattggtggttatgaggtcgtggaggggaccagggtggtgatcaattcgtgggcgatggcgaggagccccgagtactgggatgacgcggaggagtttaagccagagaggtttgaggatggcatggcagactacaaaggctcccgttttgagtacttgccgtttggaaccgggaggaggagatgccctggtgatacatttggtatggtcttgttggagctcatcgtggcacgccttctctactacttcgattggagcctccctgccggaatgcagccggatgatgttgacatggacttcgtcgtcaccgccacaactaggagaaagaaccatcttcagctagtggcgtcgccatataagttggctcctatccaaatctga</cdnaseq>

Protein Sequence

<aaseq>MEINSAATLTLVSLLTLPILLALLTRKSSSKKRRPPGPWNLPLV GGLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASR PSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVR NIKAASSGHGGGGGKKPVTLARLLTTCTNTITAKAAFGQACGVELQEQFLTALDVGLK FSGGFCFGDLFPSLRFIDAMTGLRSRLWRARGQLDSVFDKIIAQCEEHQGDSLVNVLL RIRDQGDLEFPFGTTNIKAIILDMFTGGTETTSSAAEWVMSELMRNPEVMAKVQAEVR RVFDNKSPQDHEGLIDNLRYMKMVIKETMRLNPVLPLLMPHLCRETCDIGGYEVVEGT RVVINSWAMARSPEYWDDAEEFKPERFEDGMADYKGSRFEYLPFGTGRRRCPGDTFGM VLLELIVARLLYYFDWSLPAGMQPDDVDMDFVVTATTRRKNHLQLVASPYKLAPIQI</aaseq>

Gene Sequence

<dnaseqindica>64..957#1048..1677#gccaagcaaaactgccaagtaaacctactcaccaataatccatcctcgaatcctcgatttatcatggagataaactcggcagccaccctcaccctcgtctctctcctcaccctccccattcttctggcgttgctgacccgcaagtcgtcgtcaaagaagaggaggcctccagggccatggaacctccccttggtcggcggcctcctccacctcctccggtcgcatccgcaggtcgcgctccgcgagctcgccagcaagtacggcccggtgatgttcctccggatggggcagatcgacacggtcgtcgtctcatcgccggcggcggcgcaggaggtgctccgcgacaaggacgtcatgttcgcgtcgcggccgagcctcctcgtctcggagatcttctgctacgacaacctcgacgtcggcttcgcgccctacggcgcctactggcggatgctgcgcaagctctgcacggtggagctcctcagcaccaaggtggtgcggcagctcgcgccggtcaggaatgacgagacgctgaccctcgtcaggaacatcaaggccgcctcctccggccatggcggcggcggcggcaagaagccggtcaccctcgccaggctgctcacgacgtgcacgaacacgatcaccgccaaggcggcgttcgggcaggcgtgcggcgtcgagctccaggagcagttcttgacggctctggacgtcgggctcaagttcagcggcggattctgcttcggcgacctcttcccgtcgctgcggttcatcgacgccatgaccgggctgaggagccgcctgtggcgagcacgcgggcagctggactccgtcttcgacaagatcatcgctcagtgcgaggagcatcagggtgattcccttgtcaacgtccttctcaggatcagagatcagggcgacctcgaattccccttcggcacaacgaacatcaaggcaattatactggtaataatttatttactggtgaatatatagcactaattaagatgttattttttctacattgttgttcatgtagtcgatttcattgtgcaggatatgttcacgggagggacagagacgacgtcgtcggccgcggagtgggtcatgtcggagctcatgaggaaccctgaggtaatggccaaggtacaggccgaggtgcggcgagtgttcgacaacaagagcccacaagaccatgagggcctgattgacaacctacgctacatgaagatggtgatcaaggagactatgaggttgaatccagtgttgccgctgctgatgccccatctctgccgggagacctgcgacattggtggttatgaggtcgtggaggggaccagggtggtgatcaattcgtgggcgatggcgaggagccccgagtactgggatgacgcggaggagtttaagccagagaggtttgaggatggcatggcagactacaaaggctcccgttttgagtacttgccgtttggaaccgggaggaggagatgccctggtgatacatttggtatggtcttgttggagctcatcgtggcacgccttctctactacttcgattggagcctccctgccggaatgcagccggatgatgttgacatggacttcgtcgtcaccgccacaactaggagaaagaaccatcttcagctagtggcgtcgccatataagttggctcctatccaaatctgatggatatacggctcctacccaaagctgatggatgtatcagtgtgtttgttcttttcttatcataggtgtatttgttattcgcgtgtttgtgtaccttgtaagggtgcacgtaatgtttgtccccggataatggacaaacaaataataattgtgaacaatatc</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0180400, RefSeq:Os04g0180400