Os04g0181100

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Revision as of 10:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0181100| Description = HR-like lesion-inducer family protein| Version = NM_001058714.2 GI:297602174 GeneID:4335098| Length = 3405 bp| Defi...")
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Gene Name

Os04g0181100

Description

HR-like lesion-inducer family protein

Version

NM_001058714.2 GI:297602174 GeneID:4335098

Length

3405 bp

Definition

Oryza sativa Japonica Group Os04g0181100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5519255..5522659

Sequence Coding Region

5519506..5519607,5519711..5519809,5520438..5520527,5520612..5520726,5522466..5522533

Expression

GEO Profiles:Os04g0181100

Genome Context

<gbrowseImage1> name=NC_008397:5519255..5522659 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:5519255..5522659 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggttcatctcgttcgtcgggagggtgctcttcgcctccatcttcctcctctccgcctaccaagagtttagtgaatttgggactgatggtggaccagcagcaaaggccttgaagccaaaattcaatctatttacgcagcaagtgtccaagagcttaggaatggcagtgccacatattgatataaagactgtcattgctgctaccatgtttcttaaaggctttggtggtcttctgttcatcatcagcagctcatttggagcattcctactgctcctgtacttagcagttataacacctgttgtgtacgacttctacaactatgaaatggagtcttcacaatttgttcagcttttcgtcaagttctcacagaatttggcactttttggtgccctgcttttcttcttgggaatgaagaactctattcctagaagacattccaagaggagggccgggaagaccaagacaaactga</cdnaseq>

Protein Sequence

<aaseq>MGFISFVGRVLFASIFLLSAYQEFSEFGTDGGPAAKALKPKFNL FTQQVSKSLGMAVPHIDIKTVIAATMFLKGFGGLLFIISSSFGAFLLLLYLAVITPVV YDFYNYEMESSQFVQLFVKFSQNLALFGALLFFLGMKNSIPRRHSKRRAGKTKTN</aaseq>

Gene Sequence

<dnaseqindica>3053..3154#2851..2949#2133..2222#1934..2048#127..194#cacctctccctctccccttccctcctccttcctaccccgccgccggtgcttgtcgccgccgccgccgtcagagagggcgaggagggcggctcgaggaggagcagcagcagcagcagcaggaggaggatggggttcatctcgttcgtcgggagggtgctcttcgcctccatcttcctcctctccgcctaccaagagtaagcacgcgcggcaccatcagatctctctccctccttgtcgctggctgaccggcttctttttgttcctcgccgatttctactagtataggtcgtgcccgtttcgtttggattggttggtaggatcgaagagtcgtcttgaggcaagatccgtgcgttcttggatctttgatgtgacagatctgagagagtgggtaggtgttgttgattagcggcatatcgtcgtgcgagtagaggcatgggattccattccactgcaaaaggagaggggggattggggatcagatcgcacgcggcgtgaatcttgaatccctgcatgatgatgcgcatatgcatcatcagtgggagcatgcatgttctttctttcggatgcaaatacagtagcatgtttgacagtttggaacactagtttgcagttcctctgatcccatatggtccaaatactccagtgtgttcatcatctgtgctcatcaattgggtatgtgacgtccacattatgagctgatttgatatctgtttgggttggccaagattgtggtgctagcagcagcagcagcagcactgtgctattggtagactgacccgtactcccaaccgattaccaaatccatcttcgtctgataacttaggtgtggcatgagtcgagtttccaacagtttgtgccgctagtggtgaagctctctcccaaccaattccaagtttatgactggtcacaatgctgagttaacatgactgttttgaacatcttacatttggtgatcttttaggttggggcctgacatttttattatctcagggtataaatatggttcaccggagaagcagcgatttggagatcacttagtgtaactgattttcgcgttagcttatgagttacattggtcagggttctgtaaactgtctactggtacaatgccatatgtaaggaacaaatgtcttgccagttattactgtatataattggtggctttgatgcataaccagtatgagctgcatggattaatgaataacacataccatttttagtataggacattgccgtggtcatgtttgccaatgttgtgacttgtgagtaataatcgaccttgtccaatatgtaacttttatttttcttgtttaaggttatgtggatcaacaccatttcaatgaacaagggtaactaaaacttctgttgaatttttcctctctttttcattagttagtattgtgtgcatgcttttttgtcccctttgctccatagcttgccaaaacctttctacttgcttgttacagtgacgttacagcagatatcactatttttttccacattatttgaaccattgaatgtatatgcttgaatctgctatcaagtactaatacaagttttctgaaggttaagataaattttgttatcataagtaggatttgttattccatatatgtctgctctacttgtctccgtggcaaaaaggacagtcatacttctcttgtcaacccccctgaattgttctccaaaaaaaactccctcttaattggtagccaacgcccaacgcttacaagtattagttcttctgtggcttgtgactcagaatttagcgcaggaattggcaatacaagtcctttggtagcctcccctgtttttgagttggttgtaaaaagtacttctgaaactctttttagtggttaaataattctttttcttctttccatgcaccttttatactgttgagaatcttgaatacaattgttcatacctgcaggtttagtgaatttgggactgatggtggaccagcagcaaaggccttgaagccaaaattcaatctatttacgcagcaagtgtccaagagcttaggaatggcagtgccacatattgatgtatgaatatttatttgatttggctgccccattctacctaatattgtttcatttacttataccattctacctctttttctacagataaagactgtcattgctgctaccatgtttcttaaaggctttggtggtcttctgttcatcatcagcagctcatttggagcattcctactggtgggtaatctcctcctgcaggcacagcaccacctaatgtgttttctttatgcattctgcaccatgcctacccaaagtaaaatattatgtgtatttactattgtatgatatatgtagttcttattgttttaccatataaattggcaattttagctttatttctgctttggcacagcattttgatacattttaacgagattttgtccttttaaagtcatagcatctggaaatggaaaactaacactattttcctaagagctcagtgtgcatctcattgtcagtgtagtatatttcacttgactggtgcatataagatgcactttggagtttggagtttgacatgtgattcaccatagtccaaaggccttcatgtttttttactctggaagtaaacaaatgttctgtaatcccatgaaaaacattaacccattcaaaatatatgtaattcagatctatatatgtcacagcaacactatggatctaagtattttaaggatcctgggttaaaattattgtgtaaatgtgtgctttgtctagtgtaaccccatagtatttctttccctttctaactattcttcacattctttgtcggagattggaatactgaatatcttgctcatttgtgcagctcctgtacttagcagttataacacctgttgtgtacgacttctacaactatgaaatggagtcttcacaatttgttcagcttttcgtcaagttctcacaggtttgttagcccaccacctcacttactaaagtttttatttcaaaataattcagccgttcttgttaattgttacaatccccgcatatttttcttgtctattcagaatttggcactttttggtgccctgcttttcttcttgggaatgaagaactctattcctagaagacattccaagaggagggccgggaagaccaagacaaactgaaaccagccactgtagtaggggaagctatttgtgctccttatgtttgcatactttacaaagtacatgtctcaattttcctcttgatactccatagaaattgtgaattggggacttaacagaacctagtatgtaggatacctaagtatgtctttatcagttctgttatcggtatatcccgttgtgtttcttctgtcatgaaagtaccattttgctaccgaaattgtttgtctatggaagatcaaatagattca</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0181100, RefSeq:Os04g0181100