Os04g0182900

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Revision as of 10:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0182900| Description = Amidase family protein| Version = NM_001058719.1 GI:115457167 GeneID:4335103| Length = 4635 bp| Definition = Oryza ...")
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Gene Name

Os04g0182900

Description

Amidase family protein

Version

NM_001058719.1 GI:115457167 GeneID:4335103

Length

4635 bp

Definition

Oryza sativa Japonica Group Os04g0182900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5637357..5641991

Sequence Coding Region

5637357..5637869,5637988..5638202,5640258..5640497,5641327..5641525,5641635..5641991

Expression

GEO Profiles:Os04g0182900

Genome Context

<gbrowseImage1> name=NC_008397:5637357..5641991 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:5637357..5641991 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcggcagcccgcgctcgtcgtcgtcgtcgtcgcagctgtcgcgctcgccggcggcggctcgctcggcttcgagttccatgaggccaccgtcgacgccatccagctcggcttcagcaacggcagcctcacctccacggcgctcgtccgcttctacctcgaccgcatcgcccgcctcaacacgctcctccacgccgtcatcgaggtcaaccccgacgcgctcgcccaggcggcgcgcgccgacgccgagcgcgccaccggccaccgttgcggcccgctccacggcgtgcccgtcctcctcaaggacatcatcgcgacgcgcgaccggctcaacacgacggccgggtcgctgtcgctgctcggcgcggtcgccaggcgcgacgccggcgtggtggcccggctgcggcgcgccggcgccgtcgtgctcggcaaggccaacctccccgagtgggccaacttccgcagctcgccgggtctccgcggctggagcgcacgcggcggccaatcccggaatccatacgtgctctcggccgatccgtgcgggtcgagcaccggtccggcgatcgccgcggcggcgaacatggcggcggtgacggtggggacggagacgacggcgtcgatcctgtgcccagcggcggcgaactcggtggtggggattaagccgacggttgggttgacaagccggtcaggtgttatcccgttcacaactaggcaggacaccgtcggaccgttatgtcgaacagtggcagatgctgtccatgtgttggatgctattgtgggttatgatgctcttgatgccaaagccacaaaagcagcatcgaagtatatccctgctggtggatatgtgcaattcttgagaattgatgggttgaagggtaagaggattggcataccagacggtttttttgatttcccaaatggaactgtcaggaagatggtgtacaagcaacacctcaacacaatgaggcaacagggtgcagttgtaatcgaaaacctcgagatagctaatttgagtgtcatattcgatggcactaaaagtggattgctcaccgcattgctggccgagttcaagctaaacctgaacaactatctgtcagacttatcatactcgccagttcgttctctcgctgaaataattgcattcaacaatgcacatcctgtcgaagaggagctgaaagagcatggacagagcatcttgctgatgtctgaaaacacagccgggatcggccctgcagagaaggctgcgatccgtcgtctcaacgagctgtcagtgaatggggtcgagaagctcatgaacgatcatcagctggacgccatcgtgacgccggactccgccgccgccgtcgtcctcgccttccatggcctccccggcgtggttgtgccggcagggtacgacgagaaaggagtcccctttggtgtctgcttcggtggattgaaggggtacgagccgaggctaattgagatggcttatgccttcgagcaggttaccaaagtgagaatgcctccaatgttcaagccatag</cdnaseq>

Protein Sequence

<aaseq>MARQPALVVVVVAAVALAGGGSLGFEFHEATVDAIQLGFSNGSL TSTALVRFYLDRIARLNTLLHAVIEVNPDALAQAARADAERATGHRCGPLHGVPVLLK DIIATRDRLNTTAGSLSLLGAVARRDAGVVARLRRAGAVVLGKANLPEWANFRSSPGL RGWSARGGQSRNPYVLSADPCGSSTGPAIAAAANMAAVTVGTETTASILCPAAANSVV GIKPTVGLTSRSGVIPFTTRQDTVGPLCRTVADAVHVLDAIVGYDALDAKATKAASKY IPAGGYVQFLRIDGLKGKRIGIPDGFFDFPNGTVRKMVYKQHLNTMRQQGAVVIENLE IANLSVIFDGTKSGLLTALLAEFKLNLNNYLSDLSYSPVRSLAEIIAFNNAHPVEEEL KEHGQSILLMSENTAGIGPAEKAAIRRLNELSVNGVEKLMNDHQLDAIVTPDSAAAVV LAFHGLPGVVVPAGYDEKGVPFGVCFGGLKGYEPRLIEMAYAFEQVTKVRMPPMFKP</aaseq>

Gene Sequence

<dnaseqindica>1..513#632..846#2902..3141#3971..4169#4279..4635#atggctcggcagcccgcgctcgtcgtcgtcgtcgtcgcagctgtcgcgctcgccggcggcggctcgctcggcttcgagttccatgaggccaccgtcgacgccatccagctcggcttcagcaacggcagcctcacctccacggcgctcgtccgcttctacctcgaccgcatcgcccgcctcaacacgctcctccacgccgtcatcgaggtcaaccccgacgcgctcgcccaggcggcgcgcgccgacgccgagcgcgccaccggccaccgttgcggcccgctccacggcgtgcccgtcctcctcaaggacatcatcgcgacgcgcgaccggctcaacacgacggccgggtcgctgtcgctgctcggcgcggtcgccaggcgcgacgccggcgtggtggcccggctgcggcgcgccggcgccgtcgtgctcggcaaggccaacctccccgagtgggccaacttccgcagctcgccgggtctccgcggctggagcgcacgcggcggccaatcccgggtaagcagccggcggcaagctcgacacagctgccgcctgccatggcgatcgaacgcaagctagactgggcgtcatctaactgtttgtgtgtgtgcgcgcgcacgtgtgacgtccgcagaatccatacgtgctctcggccgatccgtgcgggtcgagcaccggtccggcgatcgccgcggcggcgaacatggcggcggtgacggtggggacggagacgacggcgtcgatcctgtgcccagcggcggcgaactcggtggtggggattaagccgacggttgggttgacaagccggtcaggtgttatcccgttcacaactaggcaggacaccgtcgggtaagtttttattttcaccagctgtatatgctaaaaattgttaattcgtaccccctccgttcactaaaggaaaatgagttttagtcattaaggtgcctagtcattggagatcacatgttgatcactgttgatgatatgtaaccaccattataccttggacgtatcttgatggctataatccggttgttaaacgtactataccttccagttaccagccaatacttggtaacaataggttgaactaatagtaaccgagtaaatattggtattattttgtaaccaaatagtacttggtaaataaaagtgcactataacccttggctcttaccccctccgtcctaaaaaacgaccaatcctgactatgaatatgaacacacaagtgtccagatttatagctagaattaggttttttatgggacagagtagtagttattaaatacctattgccaccaagaacaatattaaccttggtggctaaaagatatggtcacacacaagaacaatccatacagatcaaaatatcaccataatataaacaaaataattatggcaaatctgagtatatttgattgaacaatacattgtaatagtcagaaaataactaatactacttaagtgtggatgtcacacccaatcacttctaatacaagaaaaatatatgccgtacatttatagaatttcaaagcttgggacaggtttgtgaccacagtatgcttggcatgtatatagcagaaggctattgatacggtgcacctgataaaaaaaaagttggggtcaaaccaaataagaaaggttgctcatgtatataagaaaagttgctcagccccactgccaccgctgagccctaggttttgatgtctttgaagtgtttctatgatggagatgtgttccatggcgagaacagataatagctgcacttttcaattggagtcctctgtattttcaaataattatcttaagtccttcagtccttggttgtcgtagggtcctcacatatacaaagtgtactaaaacgttgtacgacttggagtaaccaagccattaagatgttggttgctagtgatggactatagccaccaaattccttggtaactaaatccatggttactaaaggcatgttttcttgtagtgacgtttcatattatcagttattttaacctttttttctaggttgattaaatttatagaaaaacataataatattttcaacataaaacaaacatgttttcgaaacatatccaatgttatatctaatgaaagtaatttggtgttgtagatgttactaaatttttctatcaatttagttaaactaaaaaagtttaactagaaaaaaaaggtcaaaacgacttataatataaaaagatagtttgtacagtttattaacagtaattatttctttgtagctttattaaattcattattgggtattatgtttctattttcaaattaagtatgcattggcataaatatgagtacgatattttagtcatttggttttattttttttataaattaaaatatatttattcaaatataaattaatttattttttagaattgataaccaaaaattcataaaaaatagttgcaattgtccgatatttacttggcatctaaattgtgtggaagatgcatcccaatacatagtttcattgctttaattatttgttactcttgaactcgaaaagttagaataaaaataataatgccatgttgtagttgtcaaggggtcacatatttcttaccttttccttaattaaataattctgcaattgaacattaatgattatcaatttatatcagatatggagtcaaactactataatatcatcctacaaacaatattggtattttttggccttttcttcggttaatgaggggatttcctaacaatgttgtatgaatataggtttagaggttgtaaaattgaccatataaactttatgagcataggtatatcttatagcccatttttcttaatttgacatctaaagtatttcttatcctatcaaaacattaattttacatatgttgaattttgatttcaaatacacagaccgttatgtcgaacagtggcagatgctgtccatgtgttggatgctattgtgggttatgatgctcttgatgccaaagccacaaaagcagcatcgaagtatatccctgctggtggatatgtgcaattcttgagaattgatgggttgaagggtaagaggattggcataccagacggtttttttgatttcccaaatggaactgtcaggaagatggtgtacaagcaacacctcaacacaatgaggtaattttttaaggatctagaccatagcccaaataatatttattagttaacttagcaatatatatctaacgcgaggatatttgtatcgtttacgtaagatcctatgataagaatattatgacgatacttcagtgatttttcacattttgtaagtatatataggaagactacctctacggtcatctctactacgaccactgttatccccatcagagataattttaagaaccgtgagttctactctggtagaaaaaaatattatactaatatactgtaagttgtggtggtagtataaatagatatgacctattagatgagaaacatgaaaatttaggttgctgatatggtcaacgtaattcgtttaatttgtgacacatgatgggattgtgccaaaaatatatacatagtacaaggaaataaaattaatatgagttgtgtattgaagaaaaataatgttgggttgtgtaagttatcttgccttgactttgggcagaaaagacaatgacttcaaagttcaaaacgagcaatttagttcatacatgaaaccccaacaccccagctaacaaccatgttgttatcaattaatgcttatattccctttcggaagttggtattggtgtattgctacaagaattaaactaaaaaaatggttgaagattatttttacctatcacatttcagaggtaatcatcaacgaaatttttgaaccttctctcttttccctgtacgatgctttgtcgaagttgtctaatatcatatatgtagcaattgagtaattttaccagaagtaaactacaaccatttaattaattgttactcatctctgaaggcaacagggtgcagttgtaatcgaaaacctcgagatagctaatttgagtgtcatattcgatggcactaaaagtggattgctcaccgcattgctggccgagttcaagctaaacctgaacaactatctgtcagacttatcatactcgccagttcgttctctcgctgaaataattgcattcaacaatgcacatcctgtcgaagttagtcctaacacaattcactaattcatacttaaatcctttaccttctttcaaagcaagataaacctctaaattttactgacagaatttctgagctactgagctgcaggaggagctgaaagagcatggacagagcatcttgctgatgtctgaaaacacagccgggatcggccctgcagagaaggctgcgatccgtcgtctcaacgagctgtcagtgaatggggtcgagaagctcatgaacgatcatcagctggacgccatcgtgacgccggactccgccgccgccgtcgtcctcgccttccatggcctccccggcgtggttgtgccggcagggtacgacgagaaaggagtcccctttggtgtctgcttcggtggattgaaggggtacgagccgaggctaattgagatggcttatgccttcgagcaggttaccaaagtgagaatgcctccaatgttcaagccatag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0182900, RefSeq:Os04g0182900