Os04g0184100

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Revision as of 10:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0184100| Description = Amidase family protein| Version = NM_001058723.1 GI:115457175 GeneID:4335108| Length = 3837 bp| Definition = Oryza ...")
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Gene Name

Os04g0184100

Description

Amidase family protein

Version

NM_001058723.1 GI:115457175 GeneID:4335108

Length

3837 bp

Definition

Oryza sativa Japonica Group Os04g0184100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5720488..5724324

Sequence Coding Region

5720513..5721070,5721165..5721379,5722537..5722779,5723344..5723545,5723765..5724121

Expression

GEO Profiles:Os04g0184100

Genome Context

<gbrowseImage1> name=NC_008397:5720488..5724324 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:5720488..5724324 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>attaaccaacgcaaaataaacacgagtctgctgagacactgctcactgcttactttactcatggctcagcggcggctgctactcgccatcatggctctcgccgccgtcgccgccgccaccggcttcgagttccacgaggccaccgtcgacgccatccagctcggcttcagcaacggcagcctcacctccacggcgctcgtccgcttctacctcgaccagatcacccgcctcaacccgctcctccacgccgtcatcgaggtcaaccccgacgcgctcgcccaggcggcgcgcgccgacgacgagcgcgccaccggtcgccgctgcgggccgctccacggcgtccccgtcctgctcaaggacaacatcgcgacacgcgaccggctcaacacgacggccgggtcgttcgcgctgctcggctccgtcgtcccccgcgacgccggcgtggcggctcgcctccgcgccgccggcgccgttatcctcggtaaggccagcctcaccgagtggtccgcttaccgccccgccccgaacggctggagcgcccgcggcggccagacactgaatccgtacgtgcgctcgttcaccccgtgcggatcgagcagcggttcggcggtggcggcggcggcgaacatggcggcggtgacgctggggacggagaccgacgggtctatactgtgcccagcgtcgctgaattcggtggtcgggattaagccgacggttgggctcaccagccgcgccggcgtcgtccccatctcccctcgacaggacagtgttgggccaatatgtcggacagtgtcggatgctgtccatgtgttggatgccattgttgggtatgatgcacttgacgctgaagccactggagcagcatccaagtacattcctaatggtggatatggacaattcttaaggatggatggattcaaaggcaagaggattggtattcccaacggcttcttcactcaagaaatatttgagaagaaacagctgagggcataccaaaaacatattcaattaatgaggaaacatggagccatggtgattgagaacatcgacatcgcaaaaaatctgactgaagtacagaatgttcttttttccaacgagcatatcgcaatgatagcagagttcaagttaagcttgaatgcttatttgtccgacttgttgtattccccagttcgttcccttgcagatgtcatagcattcaacaaggcacatccggtggaggagaggcttaaagattttggacaaccctattttattgaagccgaaaagaccaacggcattggaccggtggagaaagcttcaatccaacatctcaataagctgtctgctgatgggctggagaagttgatgaggatgcaccagttggatgcgattgtcacgcccaatgacaacgggagagtcttcttcgccgtcagtggcatgccagcgatcaccgtgccggctgggtacgacagtcaaggagtgccatttggtacttgcttcggtggattgaagggctatgagccaaggctgattgaaatggcctatgcttatgagcaagctaccaaagttcgaatgatgcctggcttcaagatgtag</cdnaseq>

Protein Sequence

<aaseq>INQRKINTSLLRHCSLLTLLMAQRRLLLAIMALAAVAAATGFEF HEATVDAIQLGFSNGSLTSTALVRFYLDQITRLNPLLHAVIEVNPDALAQAARADDER ATGRRCGPLHGVPVLLKDNIATRDRLNTTAGSFALLGSVVPRDAGVAARLRAAGAVIL GKASLTEWSAYRPAPNGWSARGGQTLNPYVRSFTPCGSSSGSAVAAAANMAAVTLGTE TDGSILCPASLNSVVGIKPTVGLTSRAGVVPISPRQDSVGPICRTVSDAVHVLDAIVG YDALDAEATGAASKYIPNGGYGQFLRMDGFKGKRIGIPNGFFTQEIFEKKQLRAYQKH IQLMRKHGAMVIENIDIAKNLTEVQNVLFSNEHIAMIAEFKLSLNAYLSDLLYSPVRS LADVIAFNKAHPVEERLKDFGQPYFIEAEKTNGIGPVEKASIQHLNKLSADGLEKLMR MHQLDAIVTPNDNGRVFFAVSGMPAITVPAGYDSQGVPFGTCFGGLKGYEPRLIEMAY AYEQATKVRMMPGFKM</aaseq>

Gene Sequence

<dnaseqindica>26..583#678..892#2050..2292#2857..3058#3278..3634#atgggctcatggcgttcgtgtctgaattaaccaacgcaaaataaacacgagtctgctgagacactgctcactgcttactttactcatggctcagcggcggctgctactcgccatcatggctctcgccgccgtcgccgccgccaccggcttcgagttccacgaggccaccgtcgacgccatccagctcggcttcagcaacggcagcctcacctccacggcgctcgtccgcttctacctcgaccagatcacccgcctcaacccgctcctccacgccgtcatcgaggtcaaccccgacgcgctcgcccaggcggcgcgcgccgacgacgagcgcgccaccggtcgccgctgcgggccgctccacggcgtccccgtcctgctcaaggacaacatcgcgacacgcgaccggctcaacacgacggccgggtcgttcgcgctgctcggctccgtcgtcccccgcgacgccggcgtggcggctcgcctccgcgccgccggcgccgttatcctcggtaaggccagcctcaccgagtggtccgcttaccgccccgccccgaacggctggagcgcccgcggcggccagacactggtaacaccaaccaccgcaccaacaatttctgcttctttctcttctctatttgatcgtataagctcacaaggtgtttgtgaaattgtccatgaagaatccgtacgtgcgctcgttcaccccgtgcggatcgagcagcggttcggcggtggcggcggcggcgaacatggcggcggtgacgctggggacggagaccgacgggtctatactgtgcccagcgtcgctgaattcggtggtcgggattaagccgacggttgggctcaccagccgcgccggcgtcgtccccatctcccctcgacaggacagtgttgggtaatcacaagtttcattttcagtttaaaaatgaacacaatttttctggttaaaaaagtgctaacacaaggttatttgttagctttttattcttttgatgccaagtgccaaaggcgttgcttttgtatgaaacaatctcccggtttagctaaagatattttccaaacaactctactccactaacagcacaaagtatatattgtcgttttattcaaaaaattaatataaatatgctaaagtataggtcatagttaatgtttttaatgttaaaacatgcaaaacaaaataaataacattgatataatttttttaataaaatgaatgatcaaacattatgtaaaaaattaacggtgtcatgtattaaaaatatttatgtatttttttaataagacgaatgatcaaatgttatgctaaaaattaatggcatcacatattaagaaaacggagggagtacaatttaagcattaacacagattcaagtgcccaaaagcatcaacaaactcaattttgacttcactcttactaaaccaaacagattcaatcacagttttcaaatgttcccaggaccttagcttctggagtaccaaatgatcgactaaaggttaaaatctcgtcacctagcctcataacctcactaactatgatgttttgctggttacaaatctcgtagagctcatgaaaagtgggggttctatttcagttcaaaagagaaataactaacacatgtttgttttccataaactatgtagcttagtgatacggttgtgtatctagtccattacattttaattctagatttgtcatcattttttactgattttatatacgcacgcacgttcaatggatatgacattctaagcaaggaaaaaaacgtgtgcattgagtcgttacggcatctgtatatcagtatttgtccagatatatttaaaatagagatacttaaacattttcgggctaatttagttttaactattggtaactttttattatttggtaacaaaagttactgcattaaaatttacttcatggtaactacacagaaaaacaactaggactgtgacatactataggtgttatatatggaagactatgtatgaatgagtggacattttgcagtaattatatactattaacatttttaatctgacaaaatataggccaatatgtcggacagtgtcggatgctgtccatgtgttggatgccattgttgggtatgatgcacttgacgctgaagccactggagcagcatccaagtacattcctaatggtggatatggacaattcttaaggatggatggattcaaaggcaagaggattggtattcccaacggcttcttcactcaagaaatatttgagaagaaacagctgagggcataccaaaaacatattcaattaatgaggtacacaaacacaaagcacttctaaaagataatacatatgctagcatatgtgcattcagtctataaaagattttggtgatattcgtattagaagcatcatttatgaagaaagaaattgttgcagtaaaataatattctttctatgatgtttgaaagtataataaaatgttatagtcaatattgtttgtttctggcaatctggcataaaaatgagaaaagaaagtaagactcagtcaatcatattaagcactgtaatcagcaaatgatcgattcaataatatgataaaaactatcgcatatacaacaaattcttttgtttatttatctggatatagtaggaaaatatgcatgtggaaaacatagaacaaattattttgtttatttatctggatatagtcttgcaaattgagtggtatacaataataaaaagtgtgccatattgtgtagcgcagaaccattaaaatgttggctaaaatagctcaaaatgaattatactagcattcatcgtttattaagtcatatcttcttaatgttctaaaaaacgtcatttcttcttaatgaaaggaaacatggagccatggtgattgagaacatcgacatcgcaaaaaatctgactgaagtacagaatgttcttttttccaacgagcatatcgcaatgatagcagagttcaagttaagcttgaatgcttatttgtccgacttgttgtattccccagttcgttcccttgcagatgtcatagcattcaacaaggcacatccggtggaggtatgtatgggagctacttgaattaattaattaatcttgcatcacaaattctcttggcttgaaaaattataagattagatatgaatttgttcttgaaagtgcaaattttgcaacccaatgcagaaaattaaatttgagcacactcttgtttaattacgatttaattgccaaaaaaaaaaggtacgcaagaacttagtgttgtatgacgctttgttacaggagaggcttaaagattttggacaaccctattttattgaagccgaaaagaccaacggcattggaccggtggagaaagcttcaatccaacatctcaataagctgtctgctgatgggctggagaagttgatgaggatgcaccagttggatgcgattgtcacgcccaatgacaacgggagagtcttcttcgccgtcagtggcatgccagcgatcaccgtgccggctgggtacgacagtcaaggagtgccatttggtacttgcttcggtggattgaagggctatgagccaaggctgattgaaatggcctatgcttatgagcaagctaccaaagttcgaatgatgcctggcttcaagatgtagtgtatataaaatttgtgttatataattcacggagctttttgatccttgcccaaataaattgatggaactaaatagccatctagttttgttgtccaattcagggatgccaaaaatttggtagtccagagtattatatgttcaatgtattataataatttataattcaaaaattaaatatctggtaaataggatatcctattttg</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0184100, RefSeq:Os04g0184100