Os04g0186800

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Revision as of 10:59, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os04g0186800| Description = Similar to Transmembrane protein| Version = NM_001058730.2 GI:297602193 GeneID:4335116| Length = 3003 bp| Definitio...")
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Gene Name

Os04g0186800

Description

Similar to Transmembrane protein

Version

NM_001058730.2 GI:297602193 GeneID:4335116

Length

3003 bp

Definition

Oryza sativa Japonica Group Os04g0186800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:5857555..5860557

Sequence Coding Region

5857555..5857810,5857914..5858158,5859532..5860557

Expression

GEO Profiles:Os04g0186800

Genome Context

<gbrowseImage1> name=NC_008397:5857555..5860557 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008397:5857555..5860557 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcaaccagcagctgcgggtgctgcacgccctggacattgcaaggacacagctgtaccatttcatcgcgatcgtgatcgccggtatgggcttcttcaccgacgcctacgacctcttctccatctcccttgtcgccgacctcctcggccacgtctactaccacggcgagctgccccggaacatccacgccgccgtcaccggcatcgcgctttgtggcaccgtccctggacagctcgtcttcggctggctaggcgacaaaatgggccggaagcgtgtctatggaatcaccctcctcctcatggttgtctcctctctcgcctccggactctccttcagtaagcacgaggggatgaacattatcgctgtgctttgcttcttccggttctggcttggcgtcagcatcggtggggattacccactctccgccaccatcatgtcagagtacgccaacaagaggactcgtggtgccttcattgctgctgtctttgctatgcaaggtttcggcaaccttgctgctgggatcattggaatgatagtatctgcagctttcaagcattcatcggcatcaaagattgactatgcctggcggataatcctcatgtttggcgccattcctgctgctctcacttaccactggcgcatgaagatgccagaaacagcacgttacactgccctcatctctaagaatgcaaagaaggccgccaaggacatgtctgccgtgctcaatgtcaacataaccccggacgatgaagttatcaatgagcttgcaaggcaggacgagtatggcctcttctcgttcgagtttctccaccgccatggcctccacctccttggcaccaccgtctgttggttcgtcctcgacgtcaccttctactcgctcaacattttcatgaagaatatcttcaccgaggtcggtcttcttcctcgtctagatagcgaataccaccataccctccagcggatgatcaccatgacagcagttcacacatttatctcgctttgcggtgcacttcccgggtacttcttcactgtcgccttcgttgatcgcatcggccgtgtcaagatccagctgattggattcaccatgatgactgttttcatgctttgtcttgcaattccttatgatcagtggctgaggcacaagaacaagtacggatttgcagtcatgtatggcctgaccttcttcttcgccaactttgggccaaatactacaaccttcataattccagctgagattttccctgcaaggctacggtccacatgccatgggatatctggtgcggttgggaagatcggtgcgattgtcggtgtgtttggtttcttgtacacagaataccatatcaggatctttctgtttgtccttattgggtgcaatcttgttggattcatcttcacccttctcttaccagagtcgaaagggaagtccctcgaggatctcactggggagattgaagagttccaggaggaagatgaaggaagtgaagttgctttgtctagacccatacatactgtgcctttatag</cdnaseq>

Protein Sequence

<aaseq>MAGNQQLRVLHALDIARTQLYHFIAIVIAGMGFFTDAYDLFSIS LVADLLGHVYYHGELPRNIHAAVTGIALCGTVPGQLVFGWLGDKMGRKRVYGITLLLM VVSSLASGLSFSKHEGMNIIAVLCFFRFWLGVSIGGDYPLSATIMSEYANKRTRGAFI AAVFAMQGFGNLAAGIIGMIVSAAFKHSSASKIDYAWRIILMFGAIPAALTYHWRMKM PETARYTALISKNAKKAAKDMSAVLNVNITPDDEVINELARQDEYGLFSFEFLHRHGL HLLGTTVCWFVLDVTFYSLNIFMKNIFTEVGLLPRLDSEYHHTLQRMITMTAVHTFIS LCGALPGYFFTVAFVDRIGRVKIQLIGFTMMTVFMLCLAIPYDQWLRHKNKYGFAVMY GLTFFFANFGPNTTTFIIPAEIFPARLRSTCHGISGAVGKIGAIVGVFGFLYTEYHIR IFLFVLIGCNLVGFIFTLLLPESKGKSLEDLTGEIEEFQEEDEGSEVALSRPIHTVPL </aaseq>

Gene Sequence

<dnaseqindica>1..256#360..604#1978..3003#atggccggcaaccagcagctgcgggtgctgcacgccctggacattgcaaggacacagctgtaccatttcatcgcgatcgtgatcgccggtatgggcttcttcaccgacgcctacgacctcttctccatctcccttgtcgccgacctcctcggccacgtctactaccacggcgagctgccccggaacatccacgccgccgtcaccggcatcgcgctttgtggcaccgtccctggacagctcgtcttcggctggctaggtcggttgagtagataaggaaggattatattgtgtatatgtacgtactccgcttggattatcaatctaattaatcattgcgttgagtctatacacactttcaggcgacaaaatgggccggaagcgtgtctatggaatcaccctcctcctcatggttgtctcctctctcgcctccggactctccttcagtaagcacgaggggatgaacattatcgctgtgctttgcttcttccggttctggcttggcgtcagcatcggtggggattacccactctccgccaccatcatgtcagagtacgccaacaagaggactcgtggtgccttcattgctgctgtctttgctatgcaagtaagtagaaactactccctctgtctctaaatatttgacgtcgttgatttttccgttcatcttattcaaaaatttttgtgaaatatgtaaagctatatgtatacatgtttaaaaaagtcaacaacgttaaatatttagagacgaagagagtatgtttttcttattgtaattgaatccagccttaacatgaatgaggtttctgcatattacttatagtttttggaggtaaatgtacccataccatccattctttagtttttaaacataatatttcagacattattaatgacaaagtcaaaagtttgacaaaattgaagtgtcaaatatttacggctggaataggagcatgtctaaattattgttaacccagtttcgttatttatctgtcacctagcaatttttattaaagcaaaactgttaggctgtgcccagcagtgtaaaaatattatatatagcaaagagaattacaaaggattacagaacgtctagtacatattagctgattaacaacaaaacttgtaagattattcttgatcctacaactatgtaggataacatcatttccataggactagactaggagccaaataacttgcacaagtcttgcaaaatataaaatgttgcaacttcagtagaaacgaagtgcaacttttatttttgagtatattccacaacactacagatattttgcaaaaactatcacacaactatagatttcaaatatgcatcacaaaactacagacctagcatcaaataatttatcataaaaactatagatttaaagcattgtattacagaactacaaatttaatgatgaagttatcaaataactaaatattttagagtttatatccatagcacttttttttacttacaaacgctgtagtttttgtgttaaaattaatgttaaatttgtagttttgtgaaacatttgatgctaaatctaaagttttatgatgcacatccatactgttgtttttgcgaaagattgatcaatatatctatatttttttgaatttactctttatttttctttatattttagttgctgtattaatcaagatgcattactatgcttatataaatcatagtttaaagttttataatggcatgaattgaaaccacatagcatccttttcttttttacttttagatagattcaaacattaattgcttcaccacaagaaaaaatatacagaaaaaagtgaagttgttgacattgatacaaagttaaaaagtgattgattgatatttagaaaaatcattcatgtgaaaaaatagatagtccctttttaatttgttcatgttttcttcagacaagttacttcataaaactgttgtcagagaccacatgcttctgaattcacttgtagggtttcggcaaccttgctgctgggatcattggaatgatagtatctgcagctttcaagcattcatcggcatcaaagattgactatgcctggcggataatcctcatgtttggcgccattcctgctgctctcacttaccactggcgcatgaagatgccagaaacagcacgttacactgccctcatctctaagaatgcaaagaaggccgccaaggacatgtctgccgtgctcaatgtcaacataaccccggacgatgaagttatcaatgagcttgcaaggcaggacgagtatggcctcttctcgttcgagtttctccaccgccatggcctccacctccttggcaccaccgtctgttggttcgtcctcgacgtcaccttctactcgctcaacattttcatgaagaatatcttcaccgaggtcggtcttcttcctcgtctagatagcgaataccaccataccctccagcggatgatcaccatgacagcagttcacacatttatctcgctttgcggtgcacttcccgggtacttcttcactgtcgccttcgttgatcgcatcggccgtgtcaagatccagctgattggattcaccatgatgactgttttcatgctttgtcttgcaattccttatgatcagtggctgaggcacaagaacaagtacggatttgcagtcatgtatggcctgaccttcttcttcgccaactttgggccaaatactacaaccttcataattccagctgagattttccctgcaaggctacggtccacatgccatgggatatctggtgcggttgggaagatcggtgcgattgtcggtgtgtttggtttcttgtacacagaataccatatcaggatctttctgtttgtccttattgggtgcaatcttgttggattcatcttcacccttctcttaccagagtcgaaagggaagtccctcgaggatctcactggggagattgaagagttccaggaggaagatgaaggaagtgaagttgctttgtctagacccatacatactgtgcctttatag</dnaseqindica>

External Link(s)

NCBI Gene:Os04g0186800, RefSeq:Os04g0186800