Os04g0191000
| Gene Name |
Os04g0191000 |
|---|---|
| Description |
Retrotransposon gag protein family protein |
| Version |
NM_001058736.1 GI:115457201 GeneID:4335122 |
| Length |
5006 bp |
| Definition |
Oryza sativa Japonica Group Os04g0191000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 4:6186085..6191090 |
| Sequence Coding Region |
6186406..6190797 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008397:6186085..6191090 source=RiceChromosome04 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008397:6186085..6191090 source=RiceChromosome04 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccgagcccaccatcgccgacctcttgaaggagatcaagaacatgtccgccgaactcacctccctgaaggccgatatggcgaccatgaaggacaaggcctcgacggccgcaagcaccgagactcgccaccctgatgggttgcgcgacctcgacctgcctccccggcccaagaagtgggattttccccgctacgacggcaccacggatccgctgctcttcctcaacaaattcgaggcgtacttccgtcaccaccgtaccatggccgaagagcgcgtcggcatggcgtcctaccacctggacgacgtcacgcagacttggtacacccagctgctcgaggatgagggaaccccgacgtgggggcgcttcaaggaactcgtgaacctgcgtttcgggccacccctgcgttcggccccgctcttcgaactttccgagtgccgacgcacgggaacagtggaggaatactccaaccgcttccaggccctcctgccgcgcgcgggtcggctcgacgagtcccagcgcgtccagctcttcaccggcggtcttctgccgcctctcagccacgccgtccgcatccaccatccggagacgctcgccgccgccatgagcctggcacgccaggtggagttgatggagcgtgatcggccggcgccacctccactacgtgctccgccgcgtgggctgctacctgcgcctgcgccacggctcgcgttacccgcgcccgcgcagcagttggcgctgcctgccccaccagcggccgccccacagggtcgcgacgcggccaacccacggcgcctgacgccggaagagatggccgaacgctgccgccaaggtctgtgcttcaattgcaacgagaaattcacccgtggccacaacaggttctgccgtcgcctcttcttcgtcgacggggtggagatcgacgacgtcgcaatcgagggtgacgcggcggccgccgccggggatacggaggcgcccgtgttctccctgcatgccgtcgccggcgtgcccatcgcggacacgatccagctccaggtgaccgtcggcgatgcctccctcctcgccttgctggatggaggctcgacgcacagcttcatcggtgaggaggcggcaaggcgcgccggcctcccgatccagtccagcccgcgcatgacggccatcgtcgccaacggcgaacgcgtggcctgccctggtgtcatccgggacgcggcgttcaccatcaacggctccacattccacaccgatctctttgtgatgcccctcgcaggtttcgacgtggtgcttggcactcggtggctcggcacgttgggtcccatcgtgtgggacttcacctcccggtcgatggcgttccagcgagacgggcaacgcttcgcctggaagggcgtggcctcgacctcaacaacgcacctgcgtaccctagccgcggccagtgggacgctcctggatgagctcctggtcgcctatgaggacgtcttcggcgaaccgacgggcctcccacctccacgtggccgcgaccacgccatcgtcctcaagcctagctccgctcccgtggcggtccgtccgtaccgctacccagcggcgcacaaggacgagctggaacgccagtgcgccgcgatgatcgagcagggcgtcgtccgccgcagcgactcgcccttctcctcgccggtcctgctcgtcaagaaggccgacggctcgtggcgtttctgcgtcgattaccgcgccctcaacgccctcaccgtcaaggacgcgttcccgattcccgtcgtcgacgagctccacggcgcccgcttcttcaccaagctcgatctgcgatcggggtatcaccaagtgcggatgaggcccgaggacgtccacaagaccgccttccgtacacacgacggcctctacgagttcctcgtcatgccgttcgggctgtgcaacgccccggcaacgttccaggcgctgatgaacgacgtgctccgaccgtttctgcgacgcttcgtgcttgtcttctttgatgacattttgatttacagtgagacttggaccgaccacctgcggcacctgcgtaccgtcctatccgtgctccgtcagcaccggctcttcgtcaagcgcagcaagtgcaccttcggctccccctcggtgtcctacctcggccacgtcatatccgaggcgggcgtcgccatggatccggccaaggttcaggctatccacgagtggctggttccccgttcggcacgggcggtgcgcagcttcctcggcctcgccggttactaccggaagttcgtccacaactacggcaccatcgctgccccgctgacggccctcaccaagaaagacgggttctcctggacggaggacaccgccgctgccttcgacgcccttaaggcagcggtgacttcggcgcccgtcctcgccatgccggacttcgccaagccgttcaccgtcgagggcgacgcgtccacccacgggttcggcgctgtgctggtccaggacggccaccccgtggcgttcttcagccgccccgtcgtgctgcgtcatcgtgccctcgctgcctacgaaagggagctgatcggcctggtgcacgccgtacgtcactggcggccgtacctctggggccggcgcttcgtcgtcaagaccgaccactactccctcaagtacctgctggaccagcgcctcgccaccattcctcagcatcattgggtgggcaagttgctgggattcgacttcgccgtggaatacaagccgggcgctgcaaacactgttgcggacgccctgtcaaggcgcgacacggaggagggcgccatcttggcactgtctgcgcctcgctttgacttcatcagcaagctgcatgacgcgcagcgccaggacccggcgctcactgccctccgcgacgaggtcagcgccggcacgcgcacgggcccctgggcgctcgtcgacgacctgctgcagtacaacagctggttatacattcccccggcatcgcccttagctcgggagatcatcgaggctacacatgaggacgggcacgagggtgtcaagcgcaccatgcaccgcctccggcgcgagttccacatccccaacatgaagcagctcgtccaggactgggtacgctcctgcgcagtgtgccaacgctacaagtccgagcacttgagcccggccggcctcctgctgcccctgccggtgccccagggcgtttggaccgacatcgctctagatttcatcgaggcgctaccacgagtgcgcggcaagtccgtcatcctgacggtggtggacaggttcagcaaatactgccacttcatcccactggcgcacccgtactccgccgagtccgtcgctcaagccttcttcgccgagatcgttcatctacatggcgttccgcagtccatggtgtcggaccgcgaccccatcttcacctcgacgttttggcgcgaactcatgcggctgatgggcaccaagctgcacatgacgacggcattccacccacagtcggatgggcagtccgaggctgctaaccgggtgattattatgtacttgcgttgcttgacaggggaccgtccacggcaatggctgcgctggctcccatgggcggagttcatcttcaacacggcgtaccagtcctcgcttcgggacaccccgttccgggtcgtctatggcagggatccaccctccatccgctcctacgaagcgggggacacgcgggtcgccgccgtcgccaaaagcatggaggagcgggctgagttcctctttgacatccgctaccggctcgagcaagctcaggcggtccagaagctgcactatgacaagcaccaccgccacgttgcataccaggtgggcgactgggcgctcctccgcctgcgccagcggcccaccacgtcgctccctcagtccggcacgggcaagctgaagccccgcttctatgggccataccgcatcaccgagctcatcaacgacgtggccgtccgcctggagctaccggccggcgctcgtctccatgacgtgttccacattggcctgctcaagaagttccacgggccgccaccgggtgcaccaccggcgctgcctcctctccatcacggcgccatcgcccctgagccggaacgtgctgttcggtttcgtttggcgcgaggcgtgcgccaggcccttgttcagtggaagggcgagtctccggcttcggcaacttgggaggacatcgaagttctccgtgccaagtaccctgcccttcagctcgaggacgagctgagtctcgaggaggggggagatgtcatgtgggggaagacctacaccaggagacaccgagccagagatgtgcgccgggcagcagaacgtgcgggcgcacgcatggacgcagaacgcgcggtgatcgcgggcacggcgcatgcaaccgaggatgaagcgatcagcgcaagtggctga</cdnaseq> |
| Protein Sequence |
<aaseq>MAEPTIADLLKEIKNMSAELTSLKADMATMKDKASTAASTETRH PDGLRDLDLPPRPKKWDFPRYDGTTDPLLFLNKFEAYFRHHRTMAEERVGMASYHLDD VTQTWYTQLLEDEGTPTWGRFKELVNLRFGPPLRSAPLFELSECRRTGTVEEYSNRFQ ALLPRAGRLDESQRVQLFTGGLLPPLSHAVRIHHPETLAAAMSLARQVELMERDRPAP PPLRAPPRGLLPAPAPRLALPAPAQQLALPAPPAAAPQGRDAANPRRLTPEEMAERCR QGLCFNCNEKFTRGHNRFCRRLFFVDGVEIDDVAIEGDAAAAAGDTEAPVFSLHAVAG VPIADTIQLQVTVGDASLLALLDGGSTHSFIGEEAARRAGLPIQSSPRMTAIVANGER VACPGVIRDAAFTINGSTFHTDLFVMPLAGFDVVLGTRWLGTLGPIVWDFTSRSMAFQ RDGQRFAWKGVASTSTTHLRTLAAASGTLLDELLVAYEDVFGEPTGLPPPRGRDHAIV LKPSSAPVAVRPYRYPAAHKDELERQCAAMIEQGVVRRSDSPFSSPVLLVKKADGSWR FCVDYRALNALTVKDAFPIPVVDELHGARFFTKLDLRSGYHQVRMRPEDVHKTAFRTH DGLYEFLVMPFGLCNAPATFQALMNDVLRPFLRRFVLVFFDDILIYSETWTDHLRHLR TVLSVLRQHRLFVKRSKCTFGSPSVSYLGHVISEAGVAMDPAKVQAIHEWLVPRSARA VRSFLGLAGYYRKFVHNYGTIAAPLTALTKKDGFSWTEDTAAAFDALKAAVTSAPVLA MPDFAKPFTVEGDASTHGFGAVLVQDGHPVAFFSRPVVLRHRALAAYERELIGLVHAV RHWRPYLWGRRFVVKTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFAVEYKPGAANTV ADALSRRDTEEGAILALSAPRFDFISKLHDAQRQDPALTALRDEVSAGTRTGPWALVD DLLQYNSWLYIPPASPLAREIIEATHEDGHEGVKRTMHRLRREFHIPNMKQLVQDWVR SCAVCQRYKSEHLSPAGLLLPLPVPQGVWTDIALDFIEALPRVRGKSVILTVVDRFSK YCHFIPLAHPYSAESVAQAFFAEIVHLHGVPQSMVSDRDPIFTSTFWRELMRLMGTKL HMTTAFHPQSDGQSEAANRVIIMYLRCLTGDRPRQWLRWLPWAEFIFNTAYQSSLRDT PFRVVYGRDPPSIRSYEAGDTRVAAVAKSMEERAEFLFDIRYRLEQAQAVQKLHYDKH HRHVAYQVGDWALLRLRQRPTTSLPQSGTGKLKPRFYGPYRITELINDVAVRLELPAG ARLHDVFHIGLLKKFHGPPPGAPPALPPLHHGAIAPEPERAVRFRLARGVRQALVQWK GESPASATWEDIEVLRAKYPALQLEDELSLEEGGDVMWGKTYTRRHRARDVRRAAERA GARMDAERAVIAGTAHATEDEAISASG</aaseq> |
| Gene Sequence |
<dnaseqindica>294..4685#ggaggcaagatcaattacctgctctcctacctctcgctctcaagcccgatcggcagtgaggggaataacctccgcatcggaagaccacggccggagattacgaactccgtagtcgagggccgcctaccctagatcataaggctcttgacaacctggtatcacgatccactcgatcctcagccccagcagccgccgcaccttcatcttccacgccagacgccgccactagcccaccaccagcgccgccatccccagtcccatcacccgcctccgcagccaacccagccgccgacatggccgagcccaccatcgccgacctcttgaaggagatcaagaacatgtccgccgaactcacctccctgaaggccgatatggcgaccatgaaggacaaggcctcgacggccgcaagcaccgagactcgccaccctgatgggttgcgcgacctcgacctgcctccccggcccaagaagtgggattttccccgctacgacggcaccacggatccgctgctcttcctcaacaaattcgaggcgtacttccgtcaccaccgtaccatggccgaagagcgcgtcggcatggcgtcctaccacctggacgacgtcacgcagacttggtacacccagctgctcgaggatgagggaaccccgacgtgggggcgcttcaaggaactcgtgaacctgcgtttcgggccacccctgcgttcggccccgctcttcgaactttccgagtgccgacgcacgggaacagtggaggaatactccaaccgcttccaggccctcctgccgcgcgcgggtcggctcgacgagtcccagcgcgtccagctcttcaccggcggtcttctgccgcctctcagccacgccgtccgcatccaccatccggagacgctcgccgccgccatgagcctggcacgccaggtggagttgatggagcgtgatcggccggcgccacctccactacgtgctccgccgcgtgggctgctacctgcgcctgcgccacggctcgcgttacccgcgcccgcgcagcagttggcgctgcctgccccaccagcggccgccccacagggtcgcgacgcggccaacccacggcgcctgacgccggaagagatggccgaacgctgccgccaaggtctgtgcttcaattgcaacgagaaattcacccgtggccacaacaggttctgccgtcgcctcttcttcgtcgacggggtggagatcgacgacgtcgcaatcgagggtgacgcggcggccgccgccggggatacggaggcgcccgtgttctccctgcatgccgtcgccggcgtgcccatcgcggacacgatccagctccaggtgaccgtcggcgatgcctccctcctcgccttgctggatggaggctcgacgcacagcttcatcggtgaggaggcggcaaggcgcgccggcctcccgatccagtccagcccgcgcatgacggccatcgtcgccaacggcgaacgcgtggcctgccctggtgtcatccgggacgcggcgttcaccatcaacggctccacattccacaccgatctctttgtgatgcccctcgcaggtttcgacgtggtgcttggcactcggtggctcggcacgttgggtcccatcgtgtgggacttcacctcccggtcgatggcgttccagcgagacgggcaacgcttcgcctggaagggcgtggcctcgacctcaacaacgcacctgcgtaccctagccgcggccagtgggacgctcctggatgagctcctggtcgcctatgaggacgtcttcggcgaaccgacgggcctcccacctccacgtggccgcgaccacgccatcgtcctcaagcctagctccgctcccgtggcggtccgtccgtaccgctacccagcggcgcacaaggacgagctggaacgccagtgcgccgcgatgatcgagcagggcgtcgtccgccgcagcgactcgcccttctcctcgccggtcctgctcgtcaagaaggccgacggctcgtggcgtttctgcgtcgattaccgcgccctcaacgccctcaccgtcaaggacgcgttcccgattcccgtcgtcgacgagctccacggcgcccgcttcttcaccaagctcgatctgcgatcggggtatcaccaagtgcggatgaggcccgaggacgtccacaagaccgccttccgtacacacgacggcctctacgagttcctcgtcatgccgttcgggctgtgcaacgccccggcaacgttccaggcgctgatgaacgacgtgctccgaccgtttctgcgacgcttcgtgcttgtcttctttgatgacattttgatttacagtgagacttggaccgaccacctgcggcacctgcgtaccgtcctatccgtgctccgtcagcaccggctcttcgtcaagcgcagcaagtgcaccttcggctccccctcggtgtcctacctcggccacgtcatatccgaggcgggcgtcgccatggatccggccaaggttcaggctatccacgagtggctggttccccgttcggcacgggcggtgcgcagcttcctcggcctcgccggttactaccggaagttcgtccacaactacggcaccatcgctgccccgctgacggccctcaccaagaaagacgggttctcctggacggaggacaccgccgctgccttcgacgcccttaaggcagcggtgacttcggcgcccgtcctcgccatgccggacttcgccaagccgttcaccgtcgagggcgacgcgtccacccacgggttcggcgctgtgctggtccaggacggccaccccgtggcgttcttcagccgccccgtcgtgctgcgtcatcgtgccctcgctgcctacgaaagggagctgatcggcctggtgcacgccgtacgtcactggcggccgtacctctggggccggcgcttcgtcgtcaagaccgaccactactccctcaagtacctgctggaccagcgcctcgccaccattcctcagcatcattgggtgggcaagttgctgggattcgacttcgccgtggaatacaagccgggcgctgcaaacactgttgcggacgccctgtcaaggcgcgacacggaggagggcgccatcttggcactgtctgcgcctcgctttgacttcatcagcaagctgcatgacgcgcagcgccaggacccggcgctcactgccctccgcgacgaggtcagcgccggcacgcgcacgggcccctgggcgctcgtcgacgacctgctgcagtacaacagctggttatacattcccccggcatcgcccttagctcgggagatcatcgaggctacacatgaggacgggcacgagggtgtcaagcgcaccatgcaccgcctccggcgcgagttccacatccccaacatgaagcagctcgtccaggactgggtacgctcctgcgcagtgtgccaacgctacaagtccgagcacttgagcccggccggcctcctgctgcccctgccggtgccccagggcgtttggaccgacatcgctctagatttcatcgaggcgctaccacgagtgcgcggcaagtccgtcatcctgacggtggtggacaggttcagcaaatactgccacttcatcccactggcgcacccgtactccgccgagtccgtcgctcaagccttcttcgccgagatcgttcatctacatggcgttccgcagtccatggtgtcggaccgcgaccccatcttcacctcgacgttttggcgcgaactcatgcggctgatgggcaccaagctgcacatgacgacggcattccacccacagtcggatgggcagtccgaggctgctaaccgggtgattattatgtacttgcgttgcttgacaggggaccgtccacggcaatggctgcgctggctcccatgggcggagttcatcttcaacacggcgtaccagtcctcgcttcgggacaccccgttccgggtcgtctatggcagggatccaccctccatccgctcctacgaagcgggggacacgcgggtcgccgccgtcgccaaaagcatggaggagcgggctgagttcctctttgacatccgctaccggctcgagcaagctcaggcggtccagaagctgcactatgacaagcaccaccgccacgttgcataccaggtgggcgactgggcgctcctccgcctgcgccagcggcccaccacgtcgctccctcagtccggcacgggcaagctgaagccccgcttctatgggccataccgcatcaccgagctcatcaacgacgtggccgtccgcctggagctaccggccggcgctcgtctccatgacgtgttccacattggcctgctcaagaagttccacgggccgccaccgggtgcaccaccggcgctgcctcctctccatcacggcgccatcgcccctgagccggaacgtgctgttcggtttcgtttggcgcgaggcgtgcgccaggcccttgttcagtggaagggcgagtctccggcttcggcaacttgggaggacatcgaagttctccgtgccaagtaccctgcccttcagctcgaggacgagctgagtctcgaggaggggggagatgtcatgtgggggaagacctacaccaggagacaccgagccagagatgtgcgccgggcagcagaacgtgcgggcgcacgcatggacgcagaacgcgcggtgatcgcgggcacggcgcatgcaaccgaggatgaagcgatcagcgcaagtggctgaagttggaaagctatttttagttgttaagatattatttgctatctttgattagttccttgaatcgaggagtttgtttcctccgttggttagggccgatggccatatattccctgtaaaccgaaaagattagggaggcaagatcaattacctgctctcctacctctcgctctcaagcccgatcggcagtgaggggaataacctccgcatcggaagaccacggccggagattacgaactccgtagtcgagggccgcctaccctagatcataaggctcttgacagatagcatcagttcgtaaacatgactaatataaaagtggtt</dnaseqindica> 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| External Link(s) |
